Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC18■□□□□ 0.47
TRAV13-2A0A0B4J235 AC139426.1-201ENST00000568218 2529 ntBASIC18■□□□□ 0.47
TRAV13-2A0A0B4J235 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV13-2A0A0B4J235 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV13-2A0A0B4J235 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV13-2A0A0B4J235 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV13-2A0A0B4J235 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV13-2A0A0B4J235 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC17.97■□□□□ 0.47
TRAV13-2A0A0B4J235 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV13-2A0A0B4J235 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC17.95■□□□□ 0.46
TRAV13-2A0A0B4J235 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TRAV13-2A0A0B4J235 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
TRAV13-2A0A0B4J235 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC17.94■□□□□ 0.46
TRAV13-2A0A0B4J235 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
TRAV13-2A0A0B4J235 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
TRAV13-2A0A0B4J235 AC120057.4-201ENST00000624722 1615 ntBASIC17.93■□□□□ 0.46
TRAV13-2A0A0B4J235 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV13-2A0A0B4J235 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV13-2A0A0B4J235 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV13-2A0A0B4J235 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV13-2A0A0B4J235 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV13-2A0A0B4J235 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TRAV13-2A0A0B4J235 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV13-2A0A0B4J235 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV13-2A0A0B4J235 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV13-2A0A0B4J235 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV13-2A0A0B4J235 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
TRAV13-2A0A0B4J235 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TRAV13-2A0A0B4J235 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV13-2A0A0B4J235 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV13-2A0A0B4J235 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV13-2A0A0B4J235 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV13-2A0A0B4J235 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV13-2A0A0B4J235 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV13-2A0A0B4J235 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TRAV13-2A0A0B4J235 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV13-2A0A0B4J235 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV13-2A0A0B4J235 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
TRAV13-2A0A0B4J235 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV13-2A0A0B4J235 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC17.82■□□□□ 0.44
TRAV13-2A0A0B4J235 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC17.82■□□□□ 0.44
TRAV13-2A0A0B4J235 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV13-2A0A0B4J235 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV13-2A0A0B4J235 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV13-2A0A0B4J235 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV13-2A0A0B4J235 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAV13-2A0A0B4J235 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV13-2A0A0B4J235 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV13-2A0A0B4J235 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV13-2A0A0B4J235 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC17.79■□□□□ 0.44
TRAV13-2A0A0B4J235 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC17.79■□□□□ 0.44
TRAV13-2A0A0B4J235 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV13-2A0A0B4J235 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV13-2A0A0B4J235 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV13-2A0A0B4J235 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TRAV13-2A0A0B4J235 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
TRAV13-2A0A0B4J235 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV13-2A0A0B4J235 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV13-2A0A0B4J235 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV13-2A0A0B4J235 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV13-2A0A0B4J235 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV13-2A0A0B4J235 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV13-2A0A0B4J235 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV13-2A0A0B4J235 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC17.75■□□□□ 0.43
TRAV13-2A0A0B4J235 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
TRAV13-2A0A0B4J235 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV13-2A0A0B4J235 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV13-2A0A0B4J235 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV13-2A0A0B4J235 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV13-2A0A0B4J235 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV13-2A0A0B4J235 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAV13-2A0A0B4J235 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV13-2A0A0B4J235 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV13-2A0A0B4J235 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC17.71■□□□□ 0.43
TRAV13-2A0A0B4J235 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV13-2A0A0B4J235 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV13-2A0A0B4J235 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV13-2A0A0B4J235 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TRAV13-2A0A0B4J235 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
TRAV13-2A0A0B4J235 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV13-2A0A0B4J235 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV13-2A0A0B4J235 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
TRAV13-2A0A0B4J235 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV13-2A0A0B4J235 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV13-2A0A0B4J235 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV13-2A0A0B4J235 AC142086.6-201ENST00000621154 1765 ntBASIC17.69■□□□□ 0.42
TRAV13-2A0A0B4J235 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC17.69■□□□□ 0.42
TRAV13-2A0A0B4J235 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV13-2A0A0B4J235 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV13-2A0A0B4J235 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC17.68■□□□□ 0.42
TRAV13-2A0A0B4J235 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV13-2A0A0B4J235 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
TRAV13-2A0A0B4J235 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV13-2A0A0B4J235 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV13-2A0A0B4J235 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV13-2A0A0B4J235 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV13-2A0A0B4J235 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV13-2A0A0B4J235 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV13-2A0A0B4J235 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAV13-2A0A0B4J235 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms