Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC24.6■■□□□ 1.53
TRGV5A0A0B4J1U4 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC24.6■■□□□ 1.53
TRGV5A0A0B4J1U4 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
TRGV5A0A0B4J1U4 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC24.58■■□□□ 1.53
TRGV5A0A0B4J1U4 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
TRGV5A0A0B4J1U4 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC24.58■■□□□ 1.53
TRGV5A0A0B4J1U4 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC24.58■■□□□ 1.53
TRGV5A0A0B4J1U4 DENR-202ENST00000455982 1052 ntTSL 5 BASIC24.57■■□□□ 1.52
TRGV5A0A0B4J1U4 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TRGV5A0A0B4J1U4 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
TRGV5A0A0B4J1U4 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
TRGV5A0A0B4J1U4 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
TRGV5A0A0B4J1U4 AC005559.1-201ENST00000589661 871 ntBASIC24.53■■□□□ 1.52
TRGV5A0A0B4J1U4 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC24.53■■□□□ 1.52
TRGV5A0A0B4J1U4 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TRGV5A0A0B4J1U4 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TRGV5A0A0B4J1U4 DUX4L28-201ENST00000623687 678 ntBASIC24.51■■□□□ 1.51
TRGV5A0A0B4J1U4 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TRGV5A0A0B4J1U4 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
TRGV5A0A0B4J1U4 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TRGV5A0A0B4J1U4 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC24.49■■□□□ 1.51
TRGV5A0A0B4J1U4 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
TRGV5A0A0B4J1U4 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
TRGV5A0A0B4J1U4 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC24.49■■□□□ 1.51
TRGV5A0A0B4J1U4 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
TRGV5A0A0B4J1U4 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TRGV5A0A0B4J1U4 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TRGV5A0A0B4J1U4 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TRGV5A0A0B4J1U4 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TRGV5A0A0B4J1U4 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TRGV5A0A0B4J1U4 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.51
TRGV5A0A0B4J1U4 AC087741.3-201ENST00000624270 1347 ntBASIC24.45■■□□□ 1.5
TRGV5A0A0B4J1U4 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TRGV5A0A0B4J1U4 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC24.44■■□□□ 1.5
TRGV5A0A0B4J1U4 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC24.44■■□□□ 1.5
TRGV5A0A0B4J1U4 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC24.43■■□□□ 1.5
TRGV5A0A0B4J1U4 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
TRGV5A0A0B4J1U4 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
TRGV5A0A0B4J1U4 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
TRGV5A0A0B4J1U4 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TRGV5A0A0B4J1U4 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC24.4■■□□□ 1.5
TRGV5A0A0B4J1U4 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
TRGV5A0A0B4J1U4 AC044849.2-201ENST00000606596 710 ntBASIC24.39■■□□□ 1.49
TRGV5A0A0B4J1U4 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC24.38■■□□□ 1.49
TRGV5A0A0B4J1U4 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TRGV5A0A0B4J1U4 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TRGV5A0A0B4J1U4 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TRGV5A0A0B4J1U4 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TRGV5A0A0B4J1U4 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
TRGV5A0A0B4J1U4 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TRGV5A0A0B4J1U4 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
TRGV5A0A0B4J1U4 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC24.35■■□□□ 1.49
TRGV5A0A0B4J1U4 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC24.34■■□□□ 1.49
TRGV5A0A0B4J1U4 RPS2-209ENST00000529806 993 ntTSL 3 BASIC24.34■■□□□ 1.49
TRGV5A0A0B4J1U4 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
TRGV5A0A0B4J1U4 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC24.32■■□□□ 1.48
TRGV5A0A0B4J1U4 AC120057.4-201ENST00000624722 1615 ntBASIC24.32■■□□□ 1.48
TRGV5A0A0B4J1U4 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
TRGV5A0A0B4J1U4 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
TRGV5A0A0B4J1U4 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
TRGV5A0A0B4J1U4 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
TRGV5A0A0B4J1U4 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TRGV5A0A0B4J1U4 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC24.29■■□□□ 1.48
TRGV5A0A0B4J1U4 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC24.28■■□□□ 1.48
TRGV5A0A0B4J1U4 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC24.28■■□□□ 1.48
TRGV5A0A0B4J1U4 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TRGV5A0A0B4J1U4 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
TRGV5A0A0B4J1U4 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TRGV5A0A0B4J1U4 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TRGV5A0A0B4J1U4 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TRGV5A0A0B4J1U4 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
TRGV5A0A0B4J1U4 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
TRGV5A0A0B4J1U4 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC24.24■■□□□ 1.47
TRGV5A0A0B4J1U4 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
TRGV5A0A0B4J1U4 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
TRGV5A0A0B4J1U4 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC24.23■■□□□ 1.47
TRGV5A0A0B4J1U4 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC24.23■■□□□ 1.47
TRGV5A0A0B4J1U4 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC24.23■■□□□ 1.47
TRGV5A0A0B4J1U4 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
TRGV5A0A0B4J1U4 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
TRGV5A0A0B4J1U4 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
TRGV5A0A0B4J1U4 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
TRGV5A0A0B4J1U4 MLEC-202ENST00000412616 841 ntTSL 3 BASIC24.22■■□□□ 1.47
TRGV5A0A0B4J1U4 BOD1-206ENST00000480951 814 ntTSL 2 BASIC24.22■■□□□ 1.47
TRGV5A0A0B4J1U4 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TRGV5A0A0B4J1U4 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
TRGV5A0A0B4J1U4 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
TRGV5A0A0B4J1U4 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TRGV5A0A0B4J1U4 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TRGV5A0A0B4J1U4 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC24.18■■□□□ 1.46
TRGV5A0A0B4J1U4 ABHD17AP4-201ENST00000411545 909 ntBASIC24.18■■□□□ 1.46
TRGV5A0A0B4J1U4 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC24.17■■□□□ 1.46
TRGV5A0A0B4J1U4 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TRGV5A0A0B4J1U4 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TRGV5A0A0B4J1U4 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
TRGV5A0A0B4J1U4 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TRGV5A0A0B4J1U4 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
TRGV5A0A0B4J1U4 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TRGV5A0A0B4J1U4 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
TRGV5A0A0B4J1U4 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms