Protein–RNA interactions for Protein: A0A075B6T6

TRAV12-2, T-cell receptor alpha variable 12-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-2A0A075B6T6 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TRAV12-2A0A075B6T6 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV12-2A0A075B6T6 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV12-2A0A075B6T6 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV12-2A0A075B6T6 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV12-2A0A075B6T6 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC20.05■□□□□ 0.8
TRAV12-2A0A075B6T6 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV12-2A0A075B6T6 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV12-2A0A075B6T6 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV12-2A0A075B6T6 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC20.03■□□□□ 0.8
TRAV12-2A0A075B6T6 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV12-2A0A075B6T6 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC20.02■□□□□ 0.8
TRAV12-2A0A075B6T6 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV12-2A0A075B6T6 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV12-2A0A075B6T6 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC20■□□□□ 0.79
TRAV12-2A0A075B6T6 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
TRAV12-2A0A075B6T6 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC19.99■□□□□ 0.79
TRAV12-2A0A075B6T6 KLF16-203ENST00000592313 508 ntTSL 3 BASIC19.99■□□□□ 0.79
TRAV12-2A0A075B6T6 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC19.98■□□□□ 0.79
TRAV12-2A0A075B6T6 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV12-2A0A075B6T6 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV12-2A0A075B6T6 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV12-2A0A075B6T6 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV12-2A0A075B6T6 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV12-2A0A075B6T6 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
TRAV12-2A0A075B6T6 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV12-2A0A075B6T6 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC19.93■□□□□ 0.78
TRAV12-2A0A075B6T6 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC19.92■□□□□ 0.78
TRAV12-2A0A075B6T6 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
TRAV12-2A0A075B6T6 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV12-2A0A075B6T6 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC19.91■□□□□ 0.78
TRAV12-2A0A075B6T6 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV12-2A0A075B6T6 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV12-2A0A075B6T6 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV12-2A0A075B6T6 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV12-2A0A075B6T6 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
TRAV12-2A0A075B6T6 AL161658.1-201ENST00000623641 1967 ntBASIC19.88■□□□□ 0.77
TRAV12-2A0A075B6T6 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV12-2A0A075B6T6 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV12-2A0A075B6T6 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV12-2A0A075B6T6 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC19.86■□□□□ 0.77
TRAV12-2A0A075B6T6 ABCB10P1-201ENST00000614297 2181 ntBASIC19.86■□□□□ 0.77
TRAV12-2A0A075B6T6 RARRES2P7-201ENST00000567349 469 ntBASIC19.86■□□□□ 0.77
TRAV12-2A0A075B6T6 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
TRAV12-2A0A075B6T6 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV12-2A0A075B6T6 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV12-2A0A075B6T6 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV12-2A0A075B6T6 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV12-2A0A075B6T6 AL133380.1-201ENST00000506013 324 ntBASIC19.84■□□□□ 0.77
TRAV12-2A0A075B6T6 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TRAV12-2A0A075B6T6 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV12-2A0A075B6T6 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV12-2A0A075B6T6 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC19.82■□□□□ 0.76
TRAV12-2A0A075B6T6 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
TRAV12-2A0A075B6T6 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC19.81■□□□□ 0.76
TRAV12-2A0A075B6T6 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC19.81■□□□□ 0.76
TRAV12-2A0A075B6T6 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV12-2A0A075B6T6 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC19.81■□□□□ 0.76
TRAV12-2A0A075B6T6 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV12-2A0A075B6T6 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV12-2A0A075B6T6 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV12-2A0A075B6T6 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC19.78■□□□□ 0.76
TRAV12-2A0A075B6T6 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV12-2A0A075B6T6 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV12-2A0A075B6T6 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV12-2A0A075B6T6 SETD8P1-201ENST00000623146 1180 ntBASIC19.77■□□□□ 0.76
TRAV12-2A0A075B6T6 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV12-2A0A075B6T6 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV12-2A0A075B6T6 WASH5P-204ENST00000632292 975 ntBASIC19.76■□□□□ 0.75
TRAV12-2A0A075B6T6 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV12-2A0A075B6T6 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
TRAV12-2A0A075B6T6 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
TRAV12-2A0A075B6T6 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV12-2A0A075B6T6 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
TRAV12-2A0A075B6T6 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
TRAV12-2A0A075B6T6 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV12-2A0A075B6T6 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
TRAV12-2A0A075B6T6 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV12-2A0A075B6T6 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC19.72■□□□□ 0.75
TRAV12-2A0A075B6T6 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV12-2A0A075B6T6 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV12-2A0A075B6T6 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV12-2A0A075B6T6 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV12-2A0A075B6T6 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV12-2A0A075B6T6 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV12-2A0A075B6T6 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV12-2A0A075B6T6 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC19.71■□□□□ 0.75
TRAV12-2A0A075B6T6 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV12-2A0A075B6T6 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
TRAV12-2A0A075B6T6 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV12-2A0A075B6T6 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV12-2A0A075B6T6 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV12-2A0A075B6T6 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV12-2A0A075B6T6 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC19.69■□□□□ 0.74
TRAV12-2A0A075B6T6 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
TRAV12-2A0A075B6T6 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV12-2A0A075B6T6 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV12-2A0A075B6T6 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TRAV12-2A0A075B6T6 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC19.67■□□□□ 0.74
TRAV12-2A0A075B6T6 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms