Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.71■■□□□ 1.07
CSNK1G3Q9Y6M4 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CSNK1G3Q9Y6M4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.71■■□□□ 1.07
CSNK1G3Q9Y6M4 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CSNK1G3Q9Y6M4 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.71■■□□□ 1.07
CSNK1G3Q9Y6M4 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
CSNK1G3Q9Y6M4 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CSNK1G3Q9Y6M4 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CSNK1G3Q9Y6M4 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CSNK1G3Q9Y6M4 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CSNK1G3Q9Y6M4 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.7■■□□□ 1.06
CSNK1G3Q9Y6M4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.7■■□□□ 1.06
CSNK1G3Q9Y6M4 AC022517.1-201ENST00000592429 346 ntBASIC21.7■■□□□ 1.06
CSNK1G3Q9Y6M4 MIR6084-201ENST00000622012 110 ntBASIC21.7■■□□□ 1.06
CSNK1G3Q9Y6M4 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CSNK1G3Q9Y6M4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CSNK1G3Q9Y6M4 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CSNK1G3Q9Y6M4 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CSNK1G3Q9Y6M4 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CSNK1G3Q9Y6M4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.7■■□□□ 1.06
CSNK1G3Q9Y6M4 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CSNK1G3Q9Y6M4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CSNK1G3Q9Y6M4 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CSNK1G3Q9Y6M4 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CSNK1G3Q9Y6M4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CSNK1G3Q9Y6M4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.69■■□□□ 1.06
CSNK1G3Q9Y6M4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CSNK1G3Q9Y6M4 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CSNK1G3Q9Y6M4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.69■■□□□ 1.06
CSNK1G3Q9Y6M4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.69■■□□□ 1.06
CSNK1G3Q9Y6M4 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CSNK1G3Q9Y6M4 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CSNK1G3Q9Y6M4 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.68■■□□□ 1.06
CSNK1G3Q9Y6M4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CSNK1G3Q9Y6M4 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CSNK1G3Q9Y6M4 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CSNK1G3Q9Y6M4 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CSNK1G3Q9Y6M4 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CSNK1G3Q9Y6M4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.67■■□□□ 1.06
CSNK1G3Q9Y6M4 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CSNK1G3Q9Y6M4 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
CSNK1G3Q9Y6M4 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CSNK1G3Q9Y6M4 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CSNK1G3Q9Y6M4 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CSNK1G3Q9Y6M4 LINC02228-203ENST00000641970 1355 ntBASIC21.67■■□□□ 1.06
CSNK1G3Q9Y6M4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.67■■□□□ 1.06
CSNK1G3Q9Y6M4 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.67■■□□□ 1.06
CSNK1G3Q9Y6M4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CSNK1G3Q9Y6M4 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CSNK1G3Q9Y6M4 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CSNK1G3Q9Y6M4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CSNK1G3Q9Y6M4 AL139125.2-201ENST00000623134 1869 ntBASIC21.66■■□□□ 1.06
CSNK1G3Q9Y6M4 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.66■■□□□ 1.06
CSNK1G3Q9Y6M4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CSNK1G3Q9Y6M4 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
CSNK1G3Q9Y6M4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CSNK1G3Q9Y6M4 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CSNK1G3Q9Y6M4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CSNK1G3Q9Y6M4 CCDC92B-201ENST00000575506 885 ntBASIC21.66■■□□□ 1.06
CSNK1G3Q9Y6M4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.66■■□□□ 1.06
CSNK1G3Q9Y6M4 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.66■■□□□ 1.06
CSNK1G3Q9Y6M4 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CSNK1G3Q9Y6M4 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.66■■□□□ 1.06
CSNK1G3Q9Y6M4 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.66■■□□□ 1.06
CSNK1G3Q9Y6M4 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CSNK1G3Q9Y6M4 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CSNK1G3Q9Y6M4 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CSNK1G3Q9Y6M4 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CSNK1G3Q9Y6M4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CSNK1G3Q9Y6M4 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CSNK1G3Q9Y6M4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CSNK1G3Q9Y6M4 TERF1P2-201ENST00000583350 1212 ntBASIC21.65■■□□□ 1.06
CSNK1G3Q9Y6M4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.65■■□□□ 1.06
CSNK1G3Q9Y6M4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.65■■□□□ 1.06
CSNK1G3Q9Y6M4 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CSNK1G3Q9Y6M4 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CSNK1G3Q9Y6M4 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
CSNK1G3Q9Y6M4 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CSNK1G3Q9Y6M4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CSNK1G3Q9Y6M4 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CSNK1G3Q9Y6M4 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.65■■□□□ 1.06
CSNK1G3Q9Y6M4 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CSNK1G3Q9Y6M4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
CSNK1G3Q9Y6M4 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CSNK1G3Q9Y6M4 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
CSNK1G3Q9Y6M4 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.64■■□□□ 1.06
CSNK1G3Q9Y6M4 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.64■■□□□ 1.06
CSNK1G3Q9Y6M4 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CSNK1G3Q9Y6M4 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CSNK1G3Q9Y6M4 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.64■■□□□ 1.05
CSNK1G3Q9Y6M4 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CSNK1G3Q9Y6M4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
CSNK1G3Q9Y6M4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.64■■□□□ 1.05
CSNK1G3Q9Y6M4 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CSNK1G3Q9Y6M4 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CSNK1G3Q9Y6M4 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CSNK1G3Q9Y6M4 LINC00543-201ENST00000567234 1845 ntBASIC21.64■■□□□ 1.05
CSNK1G3Q9Y6M4 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.63■■□□□ 1.05
CSNK1G3Q9Y6M4 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CSNK1G3Q9Y6M4 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 193.7 ms