RNA–Protein interactions for RNA: ENST00000621835.4

HDGFL2-210, Transcript of HDGF like 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HDGFL2, Length 2,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL2-210ENST00000621835 NISCHQ9Y2I1 1504 aa51.71■■■■■ 5.87
HDGFL2-210ENST00000621835 CCDC180Q9P1Z9 1646 aa44.62■■■■■ 4.73
HDGFL2-210ENST00000621835 ZCCHC6Q5VYS8 1495 aaKnown RBP43.54■■■■■ 4.56
HDGFL2-210ENST00000621835 SHROOM4Q9ULL8 1493 aa43.01■■■■■ 4.48
HDGFL2-210ENST00000621835 DCAF8L2P0C7V8 631 aa42.86■■■■■ 4.45
HDGFL2-210ENST00000621835 DCAF1Q9Y4B6 1507 aa42.54■■■■■ 4.4
HDGFL2-210ENST00000621835 ABCC9O60706 1549 aa42.04■■■■■ 4.32
HDGFL2-210ENST00000621835 MYO15BQ96JP2 1530 aa41.75■■■■■ 4.27
HDGFL2-210ENST00000621835 SUPT5HO00267 1087 aaKnown RBP41.62■■■■■ 4.25
HDGFL2-210ENST00000621835 SCRIBQ14160 1630 aa41.45■■■■■ 4.23
HDGFL2-210ENST00000621835 NACADO15069 1562 aa41.45■■■■■ 4.23
HDGFL2-210ENST00000621835 RB1CC1Q8TDY2 1594 aa41■■■■■ 4.15
HDGFL2-210ENST00000621835 RSF1Q96T23 1441 aaPredicted RBP40.43■■■■■ 4.06
HDGFL2-210ENST00000621835 UNC13AQ9UPW8 1703 aa40.39■■■■■ 4.06
HDGFL2-210ENST00000621835 CECR2Q9BXF3 1484 aa40.34■■■■■ 4.05
HDGFL2-210ENST00000621835 MROH2BQ7Z745 1585 aa40.11■■■■■ 4.01
HDGFL2-210ENST00000621835 CHIC1Q5VXU3 224 aa40.04■■■■■ 4
HDGFL2-210ENST00000621835 BICRAQ9NZM4 1560 aa39.92■■■■□ 3.98
HDGFL2-210ENST00000621835 PABPN1Q86U42 306 aaKnown RBP eCLIP39.89■■■■□ 3.983e-6■■□□□ 13.3
HDGFL2-210ENST00000621835 WIZO95785 1651 aa39.84■■■■□ 3.97
HDGFL2-210ENST00000621835 BAZ1AQ9NRL2 1556 aaPredicted RBP39.81■■■■□ 3.96
HDGFL2-210ENST00000621835 SMARCA4P51532 1647 aa39.63■■■■□ 3.94
HDGFL2-210ENST00000621835 TOP2AP11388 1531 aaKnown RBP39.25■■■■□ 3.87
HDGFL2-210ENST00000621835 CCDC88BA6NC98 1476 aa38.99■■■■□ 3.83
HDGFL2-210ENST00000621835 SMARCA2P51531 1590 aa38.99■■■■□ 3.83
HDGFL2-210ENST00000621835 PEG3Q9GZU2 1588 aa38.99■■■■□ 3.83
HDGFL2-210ENST00000621835 TRIM41Q8WV44 630 aa38.92■■■■□ 3.82
HDGFL2-210ENST00000621835 EIF4G1Q04637 1599 aaKnown RBP38.91■■■■□ 3.82
HDGFL2-210ENST00000621835 ATAD2BQ9ULI0 1458 aa38.85■■■■□ 3.81
HDGFL2-210ENST00000621835 LOC105371045A0A1W2PR82 267 aa38.72■■■■□ 3.79
HDGFL2-210ENST00000621835 BAZ1BQ9UIG0 1483 aaKnown RBP38.65■■■■□ 3.78
HDGFL2-210ENST00000621835 ABCC8Q09428 1581 aa38.49■■■■□ 3.75
HDGFL2-210ENST00000621835 FAM9AQ8IZU1 332 aaPredicted RBP38.47■■■■□ 3.75
HDGFL2-210ENST00000621835 NCAPD3P42695 1498 aa38.32■■■■□ 3.72
HDGFL2-210ENST00000621835 HMGXB3Q12766 1538 aa38.27■■■■□ 3.72
HDGFL2-210ENST00000621835 EHMT2Q96KQ7 1210 aa38.09■■■■□ 3.69
HDGFL2-210ENST00000621835 WRNQ14191 1432 aaPredicted RBP eCLIP38■■■■□ 3.67
HDGFL2-210ENST00000621835 CC2D2AQ9P2K1 1620 aa37.95■■■■□ 3.67
HDGFL2-210ENST00000621835 SYNJ1O43426 1573 aa37.9■■■■□ 3.66
HDGFL2-210ENST00000621835 SOGA1O94964 1423 aa37.88■■■■□ 3.66
HDGFL2-210ENST00000621835 RUSC2Q8N2Y8 1516 aa37.77■■■■□ 3.64
HDGFL2-210ENST00000621835 CFTRP13569 1480 aa37.69■■■■□ 3.62
HDGFL2-210ENST00000621835 EEA1Q15075 1411 aa37.58■■■■□ 3.61
HDGFL2-210ENST00000621835 TOP2BQ02880 1626 aa37.57■■■■□ 3.6
HDGFL2-210ENST00000621835 CSRNP3Q8WYN3 585 aa37.54■■■■□ 3.6
HDGFL2-210ENST00000621835 PCGF6Q9BYE7 350 aa37.53■■■■□ 3.6
HDGFL2-210ENST00000621835 BIVM-ERCC5R4GMW8 1640 aa37.49■■■■□ 3.59
HDGFL2-210ENST00000621835 CADPSQ9ULU8 1353 aa37.45■■■■□ 3.59
HDGFL2-210ENST00000621835 PRDM2Q13029 1718 aa37.44■■■■□ 3.58
HDGFL2-210ENST00000621835 CUX1P39880 1505 aa37.43■■■■□ 3.58
HDGFL2-210ENST00000621835 TNIKQ9UKE5 1360 aa37.24■■■■□ 3.55
HDGFL2-210ENST00000621835 GOLGA3Q08378 1498 aa37.24■■■■□ 3.55
HDGFL2-210ENST00000621835 UBTFP17480 764 aaKnown RBP37.21■■■■□ 3.55
HDGFL2-210ENST00000621835 CEP162Q5TB80 1403 aa37.18■■■■□ 3.54
HDGFL2-210ENST00000621835 DNAJC5BQ9UF47 199 aa37.17■■■■□ 3.54
HDGFL2-210ENST00000621835 KIF21BO75037 1637 aa37.17■■■■□ 3.54
HDGFL2-210ENST00000621835 TRIM26Q12899 539 aaPredicted RBP37.16■■■■□ 3.54
HDGFL2-210ENST00000621835 CEP164Q9UPV0 1460 aa37.15■■■■□ 3.54
HDGFL2-210ENST00000621835 NESP48681 1621 aa37.14■■■■□ 3.54
HDGFL2-210ENST00000621835 FANCD2Q9BXW9 1451 aa37.08■■■■□ 3.53
HDGFL2-210ENST00000621835 RAPGEF2Q9Y4G8 1499 aa37.04■■■■□ 3.52
HDGFL2-210ENST00000621835 PPARGC1BQ86YN6 1023 aaKnown RBP36.98■■■■□ 3.51
HDGFL2-210ENST00000621835 KIF27Q86VH2 1401 aa36.92■■■■□ 3.5
HDGFL2-210ENST00000621835 FGD5Q6ZNL6 1462 aa36.91■■■■□ 3.5
HDGFL2-210ENST00000621835 LAMC3Q9Y6N6 1575 aa36.88■■■■□ 3.49
HDGFL2-210ENST00000621835 PRXQ9BXM0 1461 aa36.86■■■■□ 3.49
HDGFL2-210ENST00000621835 HRCP23327 699 aa36.81■■■■□ 3.48
HDGFL2-210ENST00000621835 CUX2O14529 1486 aa36.8■■■■□ 3.48
HDGFL2-210ENST00000621835 DNMBPQ6XZF7 1577 aa36.78■■■■□ 3.48
HDGFL2-210ENST00000621835 ERICH3Q5RHP9 1530 aa36.76■■■■□ 3.48
HDGFL2-210ENST00000621835 TOPBP1Q92547 1522 aa36.74■■■■□ 3.47
HDGFL2-210ENST00000621835 CLIP1P30622 1438 aa36.73■■■■□ 3.47
HDGFL2-210ENST00000621835 RANGAP1P46060 587 aaPredicted RBP36.68■■■■□ 3.46
HDGFL2-210ENST00000621835 RAD54L2Q9Y4B4 1467 aa36.64■■■■□ 3.46
HDGFL2-210ENST00000621835 POLA1P09884 1462 aaPredicted RBP36.64■■■■□ 3.46
HDGFL2-210ENST00000621835 URB2Q14146 1524 aaKnown RBP36.63■■■■□ 3.45
HDGFL2-210ENST00000621835 IGF1RP08069 1367 aa36.63■■■■□ 3.45
HDGFL2-210ENST00000621835 PDS5BQ9NTI5 1447 aa36.61■■■■□ 3.45
HDGFL2-210ENST00000621835 KIF21AQ7Z4S6 1674 aa36.59■■■■□ 3.45
HDGFL2-210ENST00000621835 TTBK1Q5TCY1 1321 aaPredicted RBP36.57■■■■□ 3.45
HDGFL2-210ENST00000621835 ABCA10Q8WWZ4 1543 aa36.5■■■■□ 3.43
HDGFL2-210ENST00000621835 VPS8Q8N3P4 1428 aa36.45■■■■□ 3.43
HDGFL2-210ENST00000621835 CARMIL1Q5VZK9 1371 aa36.43■■■■□ 3.42
HDGFL2-210ENST00000621835 WDR97A6NE52 1622 aa36.34■■■■□ 3.41
HDGFL2-210ENST00000621835 ARAP1Q96P48 1450 aa36.34■■■■□ 3.41
HDGFL2-210ENST00000621835 TDRD9Q8NDG6 1382 aaKnown RBP36.23■■■■□ 3.39
HDGFL2-210ENST00000621835 ARHGAP35Q9NRY4 1499 aa36.21■■■■□ 3.39
HDGFL2-210ENST00000621835 ABCA5Q8WWZ7 1642 aa36.17■■■■□ 3.38
HDGFL2-210ENST00000621835 MRC2Q9UBG0 1479 aa36.15■■■■□ 3.38
HDGFL2-210ENST00000621835 CUL7Q14999 1698 aa36.13■■■■□ 3.37
HDGFL2-210ENST00000621835 TARBP1Q13395 1621 aaKnown RBP36.13■■■■□ 3.37
HDGFL2-210ENST00000621835 GAPVD1Q14C86 1478 aa36.1■■■■□ 3.37
HDGFL2-210ENST00000621835 APLP2Q06481 763 aa36.1■■■■□ 3.37
HDGFL2-210ENST00000621835 WDR62O43379 1518 aa35.92■■■■□ 3.34
HDGFL2-210ENST00000621835 CTTNBP2Q8WZ74 1663 aa35.89■■■■□ 3.34
HDGFL2-210ENST00000621835 AQRO60306 1485 aaKnown RBP eCLIP35.89■■■■□ 3.345e-7■■■□□ 17.2
HDGFL2-210ENST00000621835 KANK4Q5T7N3 995 aaPredicted RBP35.89■■■■□ 3.34
HDGFL2-210ENST00000621835 ERCC6Q03468 1493 aa35.87■■■■□ 3.33
HDGFL2-210ENST00000621835 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.87■■■■□ 3.33
HDGFL2-210ENST00000621835 P3H3Q8IVL6 736 aa35.86■■■■□ 3.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms