RNA–Protein interactions for RNA: ENST00000394121.8

THRA-202, Transcript of thyroid hormone receptor alpha, humanhuman

TSL 2 BASIC

Gene THRA, Length 2,260 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THRA-202ENST00000394121 NISCHQ9Y2I1 1504 aa50.11■■■■■ 5.61
THRA-202ENST00000394121 CCDC180Q9P1Z9 1646 aa43.58■■■■■ 4.57
THRA-202ENST00000394121 ZCCHC6Q5VYS8 1495 aaKnown RBP42.02■■■■■ 4.32
THRA-202ENST00000394121 ABCC9O60706 1549 aa41.88■■■■■ 4.29
THRA-202ENST00000394121 DCAF8L2P0C7V8 631 aa41.84■■■■■ 4.29
THRA-202ENST00000394121 DCAF1Q9Y4B6 1507 aa41.23■■■■■ 4.19
THRA-202ENST00000394121 SHROOM4Q9ULL8 1493 aa41.06■■■■■ 4.16
THRA-202ENST00000394121 MYO15BQ96JP2 1530 aa40.81■■■■■ 4.12
THRA-202ENST00000394121 NACADO15069 1562 aa40.74■■■■■ 4.11
THRA-202ENST00000394121 RB1CC1Q8TDY2 1594 aa40.48■■■■■ 4.07
THRA-202ENST00000394121 SCRIBQ14160 1630 aa40.36■■■■■ 4.05
THRA-202ENST00000394121 SUPT5HO00267 1087 aaKnown RBP39.95■■■■□ 3.99
THRA-202ENST00000394121 UNC13AQ9UPW8 1703 aa39.71■■■■□ 3.95
THRA-202ENST00000394121 PABPN1Q86U42 306 aaKnown RBP eCLIP39.58■■■■□ 3.93
THRA-202ENST00000394121 BICRAQ9NZM4 1560 aa39.41■■■■□ 3.9
THRA-202ENST00000394121 CECR2Q9BXF3 1484 aa39.15■■■■□ 3.86
THRA-202ENST00000394121 CHIC1Q5VXU3 224 aa39.05■■■■□ 3.84
THRA-202ENST00000394121 RSF1Q96T23 1441 aaPredicted RBP38.87■■■■□ 3.81
THRA-202ENST00000394121 MROH2BQ7Z745 1585 aa38.81■■■■□ 3.8
THRA-202ENST00000394121 BAZ1AQ9NRL2 1556 aaPredicted RBP38.64■■■■□ 3.78
THRA-202ENST00000394121 SMARCA4P51532 1647 aa38.55■■■■□ 3.76
THRA-202ENST00000394121 WIZO95785 1651 aa38.46■■■■□ 3.75
THRA-202ENST00000394121 EIF4G1Q04637 1599 aaKnown RBP38.22■■■■□ 3.71
THRA-202ENST00000394121 HRCP23327 699 aa38.19■■■■□ 3.7
THRA-202ENST00000394121 ATAD2BQ9ULI0 1458 aa38.05■■■■□ 3.68
THRA-202ENST00000394121 PEG3Q9GZU2 1588 aa37.99■■■■□ 3.67
THRA-202ENST00000394121 PCGF6Q9BYE7 350 aa37.95■■■■□ 3.67
THRA-202ENST00000394121 TOP2AP11388 1531 aaKnown RBP37.92■■■■□ 3.66
THRA-202ENST00000394121 SMARCA2P51531 1590 aa37.88■■■■□ 3.65
THRA-202ENST00000394121 BAZ1BQ9UIG0 1483 aaKnown RBP37.8■■■■□ 3.64
THRA-202ENST00000394121 LOC105371045A0A1W2PR82 267 aa37.8■■■■□ 3.64
THRA-202ENST00000394121 CC2D2AQ9P2K1 1620 aa37.75■■■■□ 3.63
THRA-202ENST00000394121 NCAPD3P42695 1498 aa37.7■■■■□ 3.63
THRA-202ENST00000394121 CCDC88BA6NC98 1476 aa37.67■■■■□ 3.62
THRA-202ENST00000394121 HMGXB3Q12766 1538 aa37.54■■■■□ 3.6
THRA-202ENST00000394121 DNAJC5BQ9UF47 199 aa37.36■■■■□ 3.57
THRA-202ENST00000394121 TRIM26Q12899 539 aaPredicted RBP37.31■■■■□ 3.56
THRA-202ENST00000394121 TRIM41Q8WV44 630 aa37.29■■■■□ 3.56
THRA-202ENST00000394121 PPARGC1BQ86YN6 1023 aaKnown RBP37.2■■■■□ 3.55
THRA-202ENST00000394121 ABCC8Q09428 1581 aa36.87■■■■□ 3.49
THRA-202ENST00000394121 FAM9AQ8IZU1 332 aaPredicted RBP36.87■■■■□ 3.49
THRA-202ENST00000394121 CFTRP13569 1480 aa36.82■■■■□ 3.49
THRA-202ENST00000394121 CADPSQ9ULU8 1353 aa36.78■■■■□ 3.48
THRA-202ENST00000394121 NESP48681 1621 aa36.71■■■■□ 3.47
THRA-202ENST00000394121 ZEB1P37275 1124 aaPredicted RBP36.65■■■■□ 3.46
THRA-202ENST00000394121 WRNQ14191 1432 aaPredicted RBP eCLIP36.56■■■■□ 3.44
THRA-202ENST00000394121 EHMT2Q96KQ7 1210 aa36.44■■■■□ 3.42
THRA-202ENST00000394121 SYNJ1O43426 1573 aa36.44■■■■□ 3.42
THRA-202ENST00000394121 FANCD2Q9BXW9 1451 aa36.39■■■■□ 3.42
THRA-202ENST00000394121 LAMC3Q9Y6N6 1575 aa36.39■■■■□ 3.42
THRA-202ENST00000394121 PRDM2Q13029 1718 aa36.37■■■■□ 3.41
THRA-202ENST00000394121 CUX1P39880 1505 aa36.28■■■■□ 3.4
THRA-202ENST00000394121 TOP2BQ02880 1626 aa36.19■■■■□ 3.38
THRA-202ENST00000394121 PDS5BQ9NTI5 1447 aa36.19■■■■□ 3.38
THRA-202ENST00000394121 SOGA1O94964 1423 aa36.15■■■■□ 3.38
THRA-202ENST00000394121 CEP164Q9UPV0 1460 aa36.14■■■■□ 3.38
THRA-202ENST00000394121 BIVM-ERCC5R4GMW8 1640 aa36.1■■■■□ 3.37
THRA-202ENST00000394121 KIF21AQ7Z4S6 1674 aa36.08■■■■□ 3.37
THRA-202ENST00000394121 RUSC2Q8N2Y8 1516 aa36.07■■■■□ 3.37
THRA-202ENST00000394121 URB2Q14146 1524 aaKnown RBP35.99■■■■□ 3.35
THRA-202ENST00000394121 TOPBP1Q92547 1522 aa35.95■■■■□ 3.35
THRA-202ENST00000394121 FGD5Q6ZNL6 1462 aa35.92■■■■□ 3.34
THRA-202ENST00000394121 DNMBPQ6XZF7 1577 aa35.91■■■■□ 3.34
THRA-202ENST00000394121 ERCC6Q03468 1493 aa35.84■■■■□ 3.33
THRA-202ENST00000394121 EEA1Q15075 1411 aa35.83■■■■□ 3.33
THRA-202ENST00000394121 POLA1P09884 1462 aaPredicted RBP35.79■■■■□ 3.32
THRA-202ENST00000394121 CEP162Q5TB80 1403 aa35.78■■■■□ 3.32
THRA-202ENST00000394121 RAD54L2Q9Y4B4 1467 aa35.78■■■■□ 3.32
THRA-202ENST00000394121 TNIKQ9UKE5 1360 aa35.77■■■■□ 3.32
THRA-202ENST00000394121 CSRNP3Q8WYN3 585 aa35.77■■■■□ 3.32
THRA-202ENST00000394121 MRC2Q9UBG0 1479 aa35.75■■■■□ 3.31
THRA-202ENST00000394121 CUX2O14529 1486 aa35.66■■■■□ 3.3
THRA-202ENST00000394121 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.66■■■■□ 3.3
THRA-202ENST00000394121 CCER1Q8TC90 406 aaPredicted RBP35.63■■■■□ 3.29
THRA-202ENST00000394121 KIF27Q86VH2 1401 aa35.6■■■■□ 3.29
THRA-202ENST00000394121 WDR62O43379 1518 aa35.55■■■■□ 3.28
THRA-202ENST00000394121 GOLGA3Q08378 1498 aa35.52■■■■□ 3.28
THRA-202ENST00000394121 THOC2Q8NI27 1593 aaKnown RBP35.52■■■■□ 3.28
THRA-202ENST00000394121 ABCA10Q8WWZ4 1543 aa35.51■■■■□ 3.27
THRA-202ENST00000394121 TDRD9Q8NDG6 1382 aaKnown RBP35.48■■■■□ 3.27
THRA-202ENST00000394121 UBTFP17480 764 aaKnown RBP35.47■■■■□ 3.27
THRA-202ENST00000394121 IGF1RP08069 1367 aa35.42■■■■□ 3.26
THRA-202ENST00000394121 TARBP1Q13395 1621 aaKnown RBP35.39■■■■□ 3.26
THRA-202ENST00000394121 RAPGEF2Q9Y4G8 1499 aa35.37■■■■□ 3.25
THRA-202ENST00000394121 WDR97A6NE52 1622 aa35.35■■■■□ 3.25
THRA-202ENST00000394121 TTBK1Q5TCY1 1321 aaPredicted RBP35.35■■■■□ 3.25
THRA-202ENST00000394121 KIF21BO75037 1637 aa35.32■■■■□ 3.24
THRA-202ENST00000394121 PRXQ9BXM0 1461 aa35.32■■■■□ 3.24
THRA-202ENST00000394121 ZNF608Q9ULD9 1512 aaPredicted RBP35.28■■■■□ 3.24
THRA-202ENST00000394121 AQRO60306 1485 aaKnown RBP eCLIP35.28■■■■□ 3.242e-6■■■■□ 25.7
THRA-202ENST00000394121 IFT140Q96RY7 1462 aa35.25■■■■□ 3.23
THRA-202ENST00000394121 GAPVD1Q14C86 1478 aa35.24■■■■□ 3.23
THRA-202ENST00000394121 ABCA5Q8WWZ7 1642 aa35.22■■■■□ 3.23
THRA-202ENST00000394121 SCAF1Q9H7N4 1312 aaKnown RBP35.22■■■■□ 3.23
THRA-202ENST00000394121 CARMIL1Q5VZK9 1371 aa35.21■■■■□ 3.23
THRA-202ENST00000394121 RANGAP1P46060 587 aaPredicted RBP35.11■■■■□ 3.21
THRA-202ENST00000394121 ERICH3Q5RHP9 1530 aa35.1■■■■□ 3.21
THRA-202ENST00000394121 CLIP1P30622 1438 aa35.08■■■■□ 3.21
THRA-202ENST00000394121 DIEXFQ68CQ4 756 aaKnown RBP35.06■■■■□ 3.2
THRA-202ENST00000394121 EIF4G3O43432 1585 aaKnown RBP34.99■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms