RNA–Protein interactions for RNA: ENST00000337619.9

AP1S1-201, Transcript of adaptor related protein complex 1 subunit sigma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP1S1, Length 1,306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1-201ENST00000337619 NISCHQ9Y2I1 1504 aa53.07■■■■■ 6.09
AP1S1-201ENST00000337619 CCDC180Q9P1Z9 1646 aa47.44■■■■■ 5.18
AP1S1-201ENST00000337619 ABCC9O60706 1549 aa47■■■■■ 5.11
AP1S1-201ENST00000337619 RB1CC1Q8TDY2 1594 aa44.94■■■■■ 4.78
AP1S1-201ENST00000337619 NACADO15069 1562 aa44.74■■■■■ 4.75
AP1S1-201ENST00000337619 DCAF8L2P0C7V8 631 aa44.62■■■■■ 4.73
AP1S1-201ENST00000337619 MYO15BQ96JP2 1530 aa44.26■■■■■ 4.68
AP1S1-201ENST00000337619 ZCCHC6Q5VYS8 1495 aaKnown RBP44.08■■■■■ 4.65
AP1S1-201ENST00000337619 UNC13AQ9UPW8 1703 aa43.9■■■■■ 4.62
AP1S1-201ENST00000337619 DCAF1Q9Y4B6 1507 aa43.86■■■■■ 4.61
AP1S1-201ENST00000337619 PABPN1Q86U42 306 aaKnown RBP eCLIP43.82■■■■■ 4.61
AP1S1-201ENST00000337619 DNAJC5BQ9UF47 199 aa43.65■■■■■ 4.58
AP1S1-201ENST00000337619 BICRAQ9NZM4 1560 aa43.59■■■■■ 4.57
AP1S1-201ENST00000337619 SCRIBQ14160 1630 aa43.26■■■■■ 4.52
AP1S1-201ENST00000337619 SHROOM4Q9ULL8 1493 aa43.08■■■■■ 4.49
AP1S1-201ENST00000337619 EIF4G1Q04637 1599 aaKnown RBP42.5■■■■■ 4.39
AP1S1-201ENST00000337619 CC2D2AQ9P2K1 1620 aa42.48■■■■■ 4.39
AP1S1-201ENST00000337619 CECR2Q9BXF3 1484 aa42.3■■■■■ 4.36
AP1S1-201ENST00000337619 SMARCA4P51532 1647 aa41.31■■■■■ 4.2
AP1S1-201ENST00000337619 NCAPD3P42695 1498 aa41.28■■■■■ 4.2
AP1S1-201ENST00000337619 ATAD2BQ9ULI0 1458 aa41.23■■■■■ 4.19
AP1S1-201ENST00000337619 BAZ1AQ9NRL2 1556 aaPredicted RBP41.18■■■■■ 4.18
AP1S1-201ENST00000337619 SMARCA2P51531 1590 aa41.16■■■■■ 4.18
AP1S1-201ENST00000337619 HMGXB3Q12766 1538 aa41.04■■■■■ 4.16
AP1S1-201ENST00000337619 MROH2BQ7Z745 1585 aa40.9■■■■■ 4.14
AP1S1-201ENST00000337619 PEG3Q9GZU2 1588 aa40.9■■■■■ 4.14
AP1S1-201ENST00000337619 BAZ1BQ9UIG0 1483 aaKnown RBP40.87■■■■■ 4.13
AP1S1-201ENST00000337619 ERCC6Q03468 1493 aa40.57■■■■■ 4.09
AP1S1-201ENST00000337619 NESP48681 1621 aa40.5■■■■■ 4.07
AP1S1-201ENST00000337619 WIZO95785 1651 aa40.43■■■■■ 4.06
AP1S1-201ENST00000337619 CUX2O14529 1486 aa40.33■■■■■ 4.05
AP1S1-201ENST00000337619 LAMC3Q9Y6N6 1575 aa40.3■■■■■ 4.04
AP1S1-201ENST00000337619 RSF1Q96T23 1441 aaPredicted RBP40.22■■■■■ 4.03
AP1S1-201ENST00000337619 PDS5BQ9NTI5 1447 aa40.06■■■■■ 4
AP1S1-201ENST00000337619 CADPSQ9ULU8 1353 aa40.05■■■■■ 4
AP1S1-201ENST00000337619 THOC2Q8NI27 1593 aaKnown RBP40■■■■□ 3.99
AP1S1-201ENST00000337619 KIF21AQ7Z4S6 1674 aa40■■■■□ 3.99
AP1S1-201ENST00000337619 TOP2AP11388 1531 aaKnown RBP39.96■■■■□ 3.99
AP1S1-201ENST00000337619 DNAJC5Q9H3Z4 198 aa39.76■■■■□ 3.96
AP1S1-201ENST00000337619 CFTRP13569 1480 aa39.7■■■■□ 3.95
AP1S1-201ENST00000337619 MRC2Q9UBG0 1479 aa39.68■■■■□ 3.94
AP1S1-201ENST00000337619 CEP164Q9UPV0 1460 aa39.63■■■■□ 3.93
AP1S1-201ENST00000337619 FANCD2Q9BXW9 1451 aa39.61■■■■□ 3.93
AP1S1-201ENST00000337619 WDR62O43379 1518 aa39.57■■■■□ 3.92
AP1S1-201ENST00000337619 CCDC88BA6NC98 1476 aa39.5■■■■□ 3.91
AP1S1-201ENST00000337619 PRDM2Q13029 1718 aa39.35■■■■□ 3.89
AP1S1-201ENST00000337619 URB2Q14146 1524 aaKnown RBP39.25■■■■□ 3.87
AP1S1-201ENST00000337619 TOPBP1Q92547 1522 aa38.91■■■■□ 3.82
AP1S1-201ENST00000337619 ABCC8Q09428 1581 aa38.86■■■■□ 3.81
AP1S1-201ENST00000337619 DNMBPQ6XZF7 1577 aa38.82■■■■□ 3.8
AP1S1-201ENST00000337619 IFT140Q96RY7 1462 aa38.8■■■■□ 3.8
AP1S1-201ENST00000337619 SUPT5HO00267 1087 aaKnown RBP38.8■■■■□ 3.8
AP1S1-201ENST00000337619 ZNF608Q9ULD9 1512 aaPredicted RBP38.7■■■■□ 3.79
AP1S1-201ENST00000337619 POLA1P09884 1462 aaPredicted RBP38.55■■■■□ 3.76
AP1S1-201ENST00000337619 OSCARQ8IYS5 282 aa38.55■■■■□ 3.76
AP1S1-201ENST00000337619 TARBP1Q13395 1621 aaKnown RBP38.53■■■■□ 3.76
AP1S1-201ENST00000337619 EIF4G3O43432 1585 aaKnown RBP38.52■■■■□ 3.76
AP1S1-201ENST00000337619 CUX1P39880 1505 aa38.41■■■■□ 3.74
AP1S1-201ENST00000337619 AQRO60306 1485 aaKnown RBP eCLIP38.4■■■■□ 3.742e-7■■■■■ 26.8
AP1S1-201ENST00000337619 RAD54L2Q9Y4B4 1467 aa38.39■■■■□ 3.74
AP1S1-201ENST00000337619 SOGA1O94964 1423 aa38.38■■■■□ 3.73
AP1S1-201ENST00000337619 FGD5Q6ZNL6 1462 aa38.37■■■■□ 3.73
AP1S1-201ENST00000337619 TDRD9Q8NDG6 1382 aaKnown RBP38.24■■■■□ 3.71
AP1S1-201ENST00000337619 TRIM41Q8WV44 630 aa38.24■■■■□ 3.71
AP1S1-201ENST00000337619 WDR97A6NE52 1622 aa38.17■■■■□ 3.7
AP1S1-201ENST00000337619 CHD1O14646 1710 aa38.13■■■■□ 3.69
AP1S1-201ENST00000337619 FBLN2P98095 1184 aa38.09■■■■□ 3.69
AP1S1-201ENST00000337619 SNAPC4Q5SXM2 1469 aa38.04■■■■□ 3.68
AP1S1-201ENST00000337619 GRIN2BQ13224 1484 aa38■■■■□ 3.67
AP1S1-201ENST00000337619 RIMBP3CA6NJZ7 1639 aa38■■■■□ 3.67
AP1S1-201ENST00000337619 RIMBP3BA6NNM3 1639 aa38■■■■□ 3.67
AP1S1-201ENST00000337619 RIMBP3Q9UFD9 1639 aa38■■■■□ 3.67
AP1S1-201ENST00000337619 ABCA10Q8WWZ4 1543 aa37.97■■■■□ 3.67
AP1S1-201ENST00000337619 MAGI1Q96QZ7 1491 aaPredicted RBP37.95■■■■□ 3.67
AP1S1-201ENST00000337619 WRNQ14191 1432 aaPredicted RBP eCLIP37.94■■■■□ 3.66
AP1S1-201ENST00000337619 ARHGEF11O15085 1522 aa37.94■■■■□ 3.66
AP1S1-201ENST00000337619 GAPVD1Q14C86 1478 aa37.93■■■■□ 3.66
AP1S1-201ENST00000337619 TOP2BQ02880 1626 aa37.92■■■■□ 3.66
AP1S1-201ENST00000337619 BIVM-ERCC5R4GMW8 1640 aa37.92■■■■□ 3.66
AP1S1-201ENST00000337619 SYNJ1O43426 1573 aa37.88■■■■□ 3.65
AP1S1-201ENST00000337619 PBRM1Q86U86 1689 aa37.88■■■■□ 3.65
AP1S1-201ENST00000337619 CHMP7Q8WUX9 453 aaPredicted RBP37.87■■■■□ 3.65
AP1S1-201ENST00000337619 ABCA5Q8WWZ7 1642 aa37.86■■■■□ 3.65
AP1S1-201ENST00000337619 SYNJ2O15056 1496 aa37.82■■■■□ 3.65
AP1S1-201ENST00000337619 CLASP1Q7Z460 1538 aa37.7■■■■□ 3.63
AP1S1-201ENST00000337619 CYB5RLQ6IPT4 315 aa37.63■■■■□ 3.62
AP1S1-201ENST00000337619 ARAP1Q96P48 1450 aa37.59■■■■□ 3.61
AP1S1-201ENST00000337619 ADAMTS12P58397 1594 aa37.55■■■■□ 3.6
AP1S1-201ENST00000337619 GRIN2AQ12879 1464 aa37.51■■■■□ 3.6
AP1S1-201ENST00000337619 ERICH3Q5RHP9 1530 aa37.5■■■■□ 3.59
AP1S1-201ENST00000337619 FHAD1B1AJZ9 1412 aa37.46■■■■□ 3.59
AP1S1-201ENST00000337619 NUP160Q12769 1436 aa37.36■■■■□ 3.57
AP1S1-201ENST00000337619 CEP170Q5SW79 1584 aa37.35■■■■□ 3.57
AP1S1-201ENST00000337619 KIF27Q86VH2 1401 aa37.19■■■■□ 3.54
AP1S1-201ENST00000337619 ERCC6L2Q5T890 1561 aa37.15■■■■□ 3.54
AP1S1-201ENST00000337619 SHROOM2Q13796 1616 aa37.14■■■■□ 3.54
AP1S1-201ENST00000337619 IGF1RP08069 1367 aa37.11■■■■□ 3.53
AP1S1-201ENST00000337619 TRHP20396 242 aaPredicted RBP37.08■■■■□ 3.53
AP1S1-201ENST00000337619 CUL7Q14999 1698 aa37.05■■■■□ 3.52
AP1S1-201ENST00000337619 RUSC2Q8N2Y8 1516 aa37.02■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms