RNA–Protein interactions for RNA: ENST00000406567.7

PREB-202, Transcript of prolactin regulatory element binding, humanhuman

TSL 5 BASIC

Gene PREB, Length 1,910 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREB-202ENST00000406567 NISCHQ9Y2I1 1504 aa50.39■■■■■ 5.66
PREB-202ENST00000406567 CCDC180Q9P1Z9 1646 aa43.38■■■■■ 4.54
PREB-202ENST00000406567 ZCCHC6Q5VYS8 1495 aaKnown RBP42.58■■■■■ 4.41
PREB-202ENST00000406567 SHROOM4Q9ULL8 1493 aa42■■■■■ 4.31
PREB-202ENST00000406567 DCAF1Q9Y4B6 1507 aa41.6■■■■■ 4.25
PREB-202ENST00000406567 DCAF8L2P0C7V8 631 aa41.18■■■■■ 4.18
PREB-202ENST00000406567 SUPT5HO00267 1087 aaKnown RBP40.89■■■■■ 4.14
PREB-202ENST00000406567 MYO15BQ96JP2 1530 aa40.64■■■■■ 4.1
PREB-202ENST00000406567 SCRIBQ14160 1630 aa40.17■■■■■ 4.02
PREB-202ENST00000406567 ABCC9O60706 1549 aa40.13■■■■■ 4.01
PREB-202ENST00000406567 NACADO15069 1562 aa40.08■■■■■ 4.01
PREB-202ENST00000406567 CHIC1Q5VXU3 224 aa39.76■■■■□ 3.96
PREB-202ENST00000406567 RSF1Q96T23 1441 aaPredicted RBP39.55■■■■□ 3.92
PREB-202ENST00000406567 RB1CC1Q8TDY2 1594 aa39.48■■■■□ 3.91
PREB-202ENST00000406567 CECR2Q9BXF3 1484 aa39.15■■■■□ 3.86
PREB-202ENST00000406567 MROH2BQ7Z745 1585 aa39.05■■■■□ 3.84
PREB-202ENST00000406567 UNC13AQ9UPW8 1703 aa38.97■■■■□ 3.83
PREB-202ENST00000406567 WIZO95785 1651 aa38.83■■■■□ 3.81
PREB-202ENST00000406567 BAZ1AQ9NRL2 1556 aaPredicted RBP38.77■■■■□ 3.8
PREB-202ENST00000406567 SMARCA4P51532 1647 aa38.54■■■■□ 3.76
PREB-202ENST00000406567 BICRAQ9NZM4 1560 aa38.44■■■■□ 3.74
PREB-202ENST00000406567 TOP2AP11388 1531 aaKnown RBP38.35■■■■□ 3.73
PREB-202ENST00000406567 LOC105371045A0A1W2PR82 267 aa38.34■■■■□ 3.73
PREB-202ENST00000406567 EIF4G1Q04637 1599 aaKnown RBP38.33■■■■□ 3.73
PREB-202ENST00000406567 TRIM41Q8WV44 630 aa38.28■■■■□ 3.72
PREB-202ENST00000406567 SMARCA2P51531 1590 aa38.09■■■■□ 3.69
PREB-202ENST00000406567 PABPN1Q86U42 306 aaKnown RBP eCLIP38.01■■■■□ 3.68
PREB-202ENST00000406567 CCDC88BA6NC98 1476 aa38■■■■□ 3.67
PREB-202ENST00000406567 PEG3Q9GZU2 1588 aa37.98■■■■□ 3.67
PREB-202ENST00000406567 PCGF6Q9BYE7 350 aa37.74■■■■□ 3.63
PREB-202ENST00000406567 FAM9AQ8IZU1 332 aaPredicted RBP37.72■■■■□ 3.63
PREB-202ENST00000406567 ABCC8Q09428 1581 aa37.66■■■■□ 3.62
PREB-202ENST00000406567 HRCP23327 699 aa37.59■■■■□ 3.61
PREB-202ENST00000406567 ATAD2BQ9ULI0 1458 aa37.58■■■■□ 3.61
PREB-202ENST00000406567 BAZ1BQ9UIG0 1483 aaKnown RBP37.4■■■■□ 3.58
PREB-202ENST00000406567 TRIM26Q12899 539 aaPredicted RBP37.37■■■■□ 3.57
PREB-202ENST00000406567 EHMT2Q96KQ7 1210 aa37.2■■■■□ 3.55
PREB-202ENST00000406567 SOGA1O94964 1423 aa37.15■■■■□ 3.54
PREB-202ENST00000406567 WRNQ14191 1432 aaPredicted RBP eCLIP37.15■■■■□ 3.54
PREB-202ENST00000406567 EEA1Q15075 1411 aa37.13■■■■□ 3.53
PREB-202ENST00000406567 HMGXB3Q12766 1538 aa37.08■■■■□ 3.53
PREB-202ENST00000406567 SYNJ1O43426 1573 aa37.08■■■■□ 3.53
PREB-202ENST00000406567 NCAPD3P42695 1498 aa37.01■■■■□ 3.51
PREB-202ENST00000406567 RUSC2Q8N2Y8 1516 aa36.99■■■■□ 3.51
PREB-202ENST00000406567 CSRNP3Q8WYN3 585 aa36.85■■■■□ 3.49
PREB-202ENST00000406567 TNIKQ9UKE5 1360 aa36.84■■■■□ 3.49
PREB-202ENST00000406567 CEP162Q5TB80 1403 aa36.78■■■■□ 3.48
PREB-202ENST00000406567 TOP2BQ02880 1626 aa36.76■■■■□ 3.48
PREB-202ENST00000406567 GOLGA3Q08378 1498 aa36.75■■■■□ 3.47
PREB-202ENST00000406567 BIVM-ERCC5R4GMW8 1640 aa36.73■■■■□ 3.47
PREB-202ENST00000406567 KIF21BO75037 1637 aa36.72■■■■□ 3.47
PREB-202ENST00000406567 PPARGC1BQ86YN6 1023 aaKnown RBP36.65■■■■□ 3.46
PREB-202ENST00000406567 CEP164Q9UPV0 1460 aa36.61■■■■□ 3.45
PREB-202ENST00000406567 CFTRP13569 1480 aa36.54■■■■□ 3.44
PREB-202ENST00000406567 PRDM2Q13029 1718 aa36.51■■■■□ 3.44
PREB-202ENST00000406567 UBTFP17480 764 aaKnown RBP36.47■■■■□ 3.43
PREB-202ENST00000406567 CUX1P39880 1505 aa36.43■■■■□ 3.42
PREB-202ENST00000406567 ZEB1P37275 1124 aaPredicted RBP36.37■■■■□ 3.41
PREB-202ENST00000406567 RAPGEF2Q9Y4G8 1499 aa36.33■■■■□ 3.41
PREB-202ENST00000406567 CC2D2AQ9P2K1 1620 aa36.3■■■■□ 3.4
PREB-202ENST00000406567 ERICH3Q5RHP9 1530 aa36.22■■■■□ 3.39
PREB-202ENST00000406567 CLIP1P30622 1438 aa36.21■■■■□ 3.39
PREB-202ENST00000406567 PRXQ9BXM0 1461 aa36.18■■■■□ 3.38
PREB-202ENST00000406567 CADPSQ9ULU8 1353 aa36.13■■■■□ 3.37
PREB-202ENST00000406567 VPS8Q8N3P4 1428 aa36.06■■■■□ 3.36
PREB-202ENST00000406567 KIF27Q86VH2 1401 aa36.05■■■■□ 3.36
PREB-202ENST00000406567 TTBK1Q5TCY1 1321 aaPredicted RBP35.93■■■■□ 3.34
PREB-202ENST00000406567 FGD5Q6ZNL6 1462 aa35.81■■■■□ 3.32
PREB-202ENST00000406567 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.81■■■■□ 3.32
PREB-202ENST00000406567 ARAP1Q96P48 1450 aa35.8■■■■□ 3.32
PREB-202ENST00000406567 FANCD2Q9BXW9 1451 aa35.79■■■■□ 3.32
PREB-202ENST00000406567 CUX2O14529 1486 aa35.77■■■■□ 3.32
PREB-202ENST00000406567 CCER1Q8TC90 406 aaPredicted RBP35.7■■■■□ 3.31
PREB-202ENST00000406567 DNMBPQ6XZF7 1577 aa35.69■■■■□ 3.3
PREB-202ENST00000406567 IGF1RP08069 1367 aa35.68■■■■□ 3.3
PREB-202ENST00000406567 RANGAP1P46060 587 aaPredicted RBP35.63■■■■□ 3.29
PREB-202ENST00000406567 NESP48681 1621 aa35.6■■■■□ 3.29
PREB-202ENST00000406567 LAMC3Q9Y6N6 1575 aa35.56■■■■□ 3.28
PREB-202ENST00000406567 ARHGAP35Q9NRY4 1499 aa35.56■■■■□ 3.28
PREB-202ENST00000406567 TOPBP1Q92547 1522 aa35.56■■■■□ 3.28
PREB-202ENST00000406567 APLP2Q06481 763 aa35.55■■■■□ 3.28
PREB-202ENST00000406567 ABCA10Q8WWZ4 1543 aa35.49■■■■□ 3.27
PREB-202ENST00000406567 CARMIL1Q5VZK9 1371 aa35.48■■■■□ 3.27
PREB-202ENST00000406567 POLA1P09884 1462 aaPredicted RBP35.48■■■■□ 3.27
PREB-202ENST00000406567 RAD54L2Q9Y4B4 1467 aa35.41■■■■□ 3.26
PREB-202ENST00000406567 WDR97A6NE52 1622 aa35.39■■■■□ 3.26
PREB-202ENST00000406567 URB2Q14146 1524 aaKnown RBP35.34■■■■□ 3.25
PREB-202ENST00000406567 CUL7Q14999 1698 aa35.31■■■■□ 3.24
PREB-202ENST00000406567 HNRNPUL2Q1KMD3 747 aaKnown RBP35.28■■■■□ 3.24
PREB-202ENST00000406567 KANK4Q5T7N3 995 aaPredicted RBP35.27■■■■□ 3.24
PREB-202ENST00000406567 KIF21AQ7Z4S6 1674 aa35.21■■■■□ 3.23
PREB-202ENST00000406567 MAP3K1Q13233 1512 aa35.2■■■■□ 3.23
PREB-202ENST00000406567 PDS5BQ9NTI5 1447 aa35.2■■■■□ 3.22
PREB-202ENST00000406567 RRBP1Q9P2E9 1410 aaKnown RBP35.2■■■■□ 3.22
PREB-202ENST00000406567 ABCA5Q8WWZ7 1642 aa35.18■■■■□ 3.22
PREB-202ENST00000406567 CTTNBP2Q8WZ74 1663 aa35.16■■■■□ 3.22
PREB-202ENST00000406567 TIAM1Q13009 1591 aa35.15■■■■□ 3.22
PREB-202ENST00000406567 DNAJC5BQ9UF47 199 aa35.15■■■■□ 3.22
PREB-202ENST00000406567 EFCAB5A4FU69 1503 aa35.07■■■■□ 3.2
PREB-202ENST00000406567 CFAP43Q8NDM7 1665 aa35.05■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms