RNA–Protein interactions for RNA: ENST00000307395.4

GP9-201, Transcript of glycoprotein IX platelet, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GP9, Length 889 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GP9-201ENST00000307395 NISCHQ9Y2I1 1504 aa53.52■■■■■ 6.16
GP9-201ENST00000307395 CCDC180Q9P1Z9 1646 aa47.91■■■■■ 5.26
GP9-201ENST00000307395 ABCC9O60706 1549 aa47.67■■■■■ 5.22
GP9-201ENST00000307395 RB1CC1Q8TDY2 1594 aa45.46■■■■■ 4.87
GP9-201ENST00000307395 NACADO15069 1562 aa45.23■■■■■ 4.83
GP9-201ENST00000307395 DCAF8L2P0C7V8 631 aa44.95■■■■■ 4.79
GP9-201ENST00000307395 MYO15BQ96JP2 1530 aa44.7■■■■■ 4.75
GP9-201ENST00000307395 DNAJC5BQ9UF47 199 aa44.53■■■■■ 4.72
GP9-201ENST00000307395 UNC13AQ9UPW8 1703 aa44.48■■■■■ 4.71
GP9-201ENST00000307395 ZCCHC6Q5VYS8 1495 aaKnown RBP44.43■■■■■ 4.7
GP9-201ENST00000307395 PABPN1Q86U42 306 aaKnown RBP eCLIP44.41■■■■■ 4.7
GP9-201ENST00000307395 DCAF1Q9Y4B6 1507 aa44.23■■■■■ 4.67
GP9-201ENST00000307395 BICRAQ9NZM4 1560 aa44.2■■■■■ 4.67
GP9-201ENST00000307395 SCRIBQ14160 1630 aa43.67■■■■■ 4.58
GP9-201ENST00000307395 SHROOM4Q9ULL8 1493 aa43.58■■■■■ 4.57
GP9-201ENST00000307395 CC2D2AQ9P2K1 1620 aa43.08■■■■■ 4.49
GP9-201ENST00000307395 EIF4G1Q04637 1599 aaKnown RBP43.07■■■■■ 4.48
GP9-201ENST00000307395 CECR2Q9BXF3 1484 aa42.91■■■■■ 4.46
GP9-201ENST00000307395 NCAPD3P42695 1498 aa41.76■■■■■ 4.28
GP9-201ENST00000307395 SMARCA4P51532 1647 aa41.69■■■■■ 4.27
GP9-201ENST00000307395 ATAD2BQ9ULI0 1458 aa41.68■■■■■ 4.26
GP9-201ENST00000307395 SMARCA2P51531 1590 aa41.54■■■■■ 4.24
GP9-201ENST00000307395 BAZ1AQ9NRL2 1556 aaPredicted RBP41.5■■■■■ 4.23
GP9-201ENST00000307395 HMGXB3Q12766 1538 aa41.49■■■■■ 4.23
GP9-201ENST00000307395 PEG3Q9GZU2 1588 aa41.31■■■■■ 4.2
GP9-201ENST00000307395 MROH2BQ7Z745 1585 aa41.26■■■■■ 4.2
GP9-201ENST00000307395 BAZ1BQ9UIG0 1483 aaKnown RBP41.26■■■■■ 4.2
GP9-201ENST00000307395 ERCC6Q03468 1493 aa41.1■■■■■ 4.17
GP9-201ENST00000307395 NESP48681 1621 aa41.04■■■■■ 4.16
GP9-201ENST00000307395 CUX2O14529 1486 aa40.97■■■■■ 4.15
GP9-201ENST00000307395 LAMC3Q9Y6N6 1575 aa40.77■■■■■ 4.12
GP9-201ENST00000307395 WIZO95785 1651 aa40.75■■■■■ 4.11
GP9-201ENST00000307395 DNAJC5Q9H3Z4 198 aa40.66■■■■■ 4.1
GP9-201ENST00000307395 THOC2Q8NI27 1593 aaKnown RBP40.6■■■■■ 4.09
GP9-201ENST00000307395 KIF21AQ7Z4S6 1674 aa40.51■■■■■ 4.08
GP9-201ENST00000307395 RSF1Q96T23 1441 aaPredicted RBP40.49■■■■■ 4.07
GP9-201ENST00000307395 PDS5BQ9NTI5 1447 aa40.49■■■■■ 4.07
GP9-201ENST00000307395 CADPSQ9ULU8 1353 aa40.48■■■■■ 4.07
GP9-201ENST00000307395 TOP2AP11388 1531 aaKnown RBP40.26■■■■■ 4.04
GP9-201ENST00000307395 MRC2Q9UBG0 1479 aa40.17■■■■■ 4.02
GP9-201ENST00000307395 CFTRP13569 1480 aa40.1■■■■■ 4.01
GP9-201ENST00000307395 WDR62O43379 1518 aa40.09■■■■■ 4.01
GP9-201ENST00000307395 CEP164Q9UPV0 1460 aa40.05■■■■■ 4
GP9-201ENST00000307395 FANCD2Q9BXW9 1451 aa40.04■■■■■ 4
GP9-201ENST00000307395 CCDC88BA6NC98 1476 aa39.8■■■■□ 3.96
GP9-201ENST00000307395 URB2Q14146 1524 aaKnown RBP39.72■■■■□ 3.95
GP9-201ENST00000307395 PRDM2Q13029 1718 aa39.7■■■■□ 3.95
GP9-201ENST00000307395 TOPBP1Q92547 1522 aa39.32■■■■□ 3.89
GP9-201ENST00000307395 IFT140Q96RY7 1462 aa39.24■■■■□ 3.87
GP9-201ENST00000307395 ABCC8Q09428 1581 aa39.2■■■■□ 3.87
GP9-201ENST00000307395 ZNF608Q9ULD9 1512 aaPredicted RBP39.19■■■■□ 3.86
GP9-201ENST00000307395 DNMBPQ6XZF7 1577 aa39.19■■■■□ 3.86
GP9-201ENST00000307395 OSCARQ8IYS5 282 aa39.1■■■■□ 3.85
GP9-201ENST00000307395 EIF4G3O43432 1585 aaKnown RBP38.98■■■■□ 3.83
GP9-201ENST00000307395 TARBP1Q13395 1621 aaKnown RBP38.97■■■■□ 3.83
GP9-201ENST00000307395 TRIM41Q8WV44 630 aa38.95■■■■□ 3.83
GP9-201ENST00000307395 POLA1P09884 1462 aaPredicted RBP38.94■■■■□ 3.82
GP9-201ENST00000307395 AQRO60306 1485 aaKnown RBP eCLIP38.84■■■■□ 3.81
GP9-201ENST00000307395 SUPT5HO00267 1087 aaKnown RBP38.79■■■■□ 3.8
GP9-201ENST00000307395 RAD54L2Q9Y4B4 1467 aa38.79■■■■□ 3.8
GP9-201ENST00000307395 CUX1P39880 1505 aa38.74■■■■□ 3.79
GP9-201ENST00000307395 FGD5Q6ZNL6 1462 aa38.73■■■■□ 3.79
GP9-201ENST00000307395 SOGA1O94964 1423 aa38.72■■■■□ 3.79
GP9-201ENST00000307395 TDRD9Q8NDG6 1382 aaKnown RBP38.63■■■■□ 3.77
GP9-201ENST00000307395 CHD1O14646 1710 aa38.63■■■■□ 3.77
GP9-201ENST00000307395 RIMBP3CA6NJZ7 1639 aa38.63■■■■□ 3.77
GP9-201ENST00000307395 RIMBP3BA6NNM3 1639 aa38.63■■■■□ 3.77
GP9-201ENST00000307395 RIMBP3Q9UFD9 1639 aa38.63■■■■□ 3.77
GP9-201ENST00000307395 WDR97A6NE52 1622 aa38.56■■■■□ 3.76
GP9-201ENST00000307395 ARHGEF11O15085 1522 aa38.53■■■■□ 3.76
GP9-201ENST00000307395 SNAPC4Q5SXM2 1469 aa38.47■■■■□ 3.75
GP9-201ENST00000307395 FBLN2P98095 1184 aa38.46■■■■□ 3.75
GP9-201ENST00000307395 GRIN2BQ13224 1484 aa38.37■■■■□ 3.73
GP9-201ENST00000307395 MAGI1Q96QZ7 1491 aaPredicted RBP38.36■■■■□ 3.73
GP9-201ENST00000307395 ABCA10Q8WWZ4 1543 aa38.3■■■■□ 3.72
GP9-201ENST00000307395 GAPVD1Q14C86 1478 aa38.27■■■■□ 3.72
GP9-201ENST00000307395 PBRM1Q86U86 1689 aa38.25■■■■□ 3.71
GP9-201ENST00000307395 ABCA5Q8WWZ7 1642 aa38.24■■■■□ 3.71
GP9-201ENST00000307395 CHMP7Q8WUX9 453 aaPredicted RBP38.23■■■■□ 3.71
GP9-201ENST00000307395 CLASP1Q7Z460 1538 aa38.22■■■■□ 3.71
GP9-201ENST00000307395 SYNJ2O15056 1496 aa38.22■■■■□ 3.71
GP9-201ENST00000307395 ARAP1Q96P48 1450 aa38.19■■■■□ 3.7
GP9-201ENST00000307395 CYB5RLQ6IPT4 315 aa38.18■■■■□ 3.7
GP9-201ENST00000307395 BIVM-ERCC5R4GMW8 1640 aa38.18■■■■□ 3.7
GP9-201ENST00000307395 TOP2BQ02880 1626 aa38.17■■■■□ 3.7
GP9-201ENST00000307395 SYNJ1O43426 1573 aa38.17■■■■□ 3.7
GP9-201ENST00000307395 WRNQ14191 1432 aaPredicted RBP eCLIP38.16■■■■□ 3.7
GP9-201ENST00000307395 ADAMTS12P58397 1594 aa37.93■■■■□ 3.66
GP9-201ENST00000307395 GRIN2AQ12879 1464 aa37.9■■■■□ 3.66
GP9-201ENST00000307395 ERICH3Q5RHP9 1530 aa37.81■■■■□ 3.64
GP9-201ENST00000307395 FHAD1B1AJZ9 1412 aa37.8■■■■□ 3.64
GP9-201ENST00000307395 NUP160Q12769 1436 aa37.78■■■■□ 3.64
GP9-201ENST00000307395 CEP170Q5SW79 1584 aa37.78■■■■□ 3.64
GP9-201ENST00000307395 ERCC6L2Q5T890 1561 aa37.66■■■■□ 3.62
GP9-201ENST00000307395 TRHP20396 242 aaPredicted RBP37.63■■■■□ 3.61
GP9-201ENST00000307395 SHROOM2Q13796 1616 aa37.59■■■■□ 3.61
GP9-201ENST00000307395 KIF27Q86VH2 1401 aa37.4■■■■□ 3.58
GP9-201ENST00000307395 RUSC2Q8N2Y8 1516 aa37.4■■■■□ 3.58
GP9-201ENST00000307395 IGF1RP08069 1367 aa37.38■■■■□ 3.57
GP9-201ENST00000307395 PRG4Q92954 1404 aaPredicted RBP37.36■■■■□ 3.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms