RNA–Protein interactions for RNA: ENST00000553716.5

PGF-203, Transcript of placental growth factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PGF, Length 1,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGF-203ENST00000553716 NISCHQ9Y2I1 1504 aa51.82■■■■■ 5.89
PGF-203ENST00000553716 CCDC180Q9P1Z9 1646 aa45■■■■■ 4.79
PGF-203ENST00000553716 ZCCHC6Q5VYS8 1495 aaKnown RBP43.63■■■■■ 4.58
PGF-203ENST00000553716 DCAF1Q9Y4B6 1507 aa42.89■■■■■ 4.46
PGF-203ENST00000553716 DCAF8L2P0C7V8 631 aa42.44■■■■■ 4.39
PGF-203ENST00000553716 SHROOM4Q9ULL8 1493 aa42.41■■■■■ 4.38
PGF-203ENST00000553716 MYO15BQ96JP2 1530 aa42.24■■■■■ 4.35
PGF-203ENST00000553716 ABCC9O60706 1549 aa42.13■■■■■ 4.33
PGF-203ENST00000553716 NACADO15069 1562 aa41.8■■■■■ 4.28
PGF-203ENST00000553716 SCRIBQ14160 1630 aa41.38■■■■■ 4.22
PGF-203ENST00000553716 RB1CC1Q8TDY2 1594 aa41.32■■■■■ 4.2
PGF-203ENST00000553716 SUPT5HO00267 1087 aaKnown RBP40.98■■■■■ 4.15
PGF-203ENST00000553716 UNC13AQ9UPW8 1703 aa40.61■■■■■ 4.09
PGF-203ENST00000553716 RSF1Q96T23 1441 aaPredicted RBP40.36■■■■■ 4.05
PGF-203ENST00000553716 CECR2Q9BXF3 1484 aa40.25■■■■■ 4.03
PGF-203ENST00000553716 BICRAQ9NZM4 1560 aa40.19■■■■■ 4.02
PGF-203ENST00000553716 MROH2BQ7Z745 1585 aa40.06■■■■■ 4
PGF-203ENST00000553716 BAZ1AQ9NRL2 1556 aaPredicted RBP39.94■■■■□ 3.98
PGF-203ENST00000553716 PABPN1Q86U42 306 aaKnown RBP eCLIP39.8■■■■□ 3.96
PGF-203ENST00000553716 SMARCA4P51532 1647 aa39.75■■■■□ 3.95
PGF-203ENST00000553716 WIZO95785 1651 aa39.74■■■■□ 3.95
PGF-203ENST00000553716 CHIC1Q5VXU3 224 aa39.55■■■■□ 3.92
PGF-203ENST00000553716 TOP2AP11388 1531 aaKnown RBP39.33■■■■□ 3.89
PGF-203ENST00000553716 PEG3Q9GZU2 1588 aa39.3■■■■□ 3.88
PGF-203ENST00000553716 SMARCA2P51531 1590 aa39■■■■□ 3.83
PGF-203ENST00000553716 ATAD2BQ9ULI0 1458 aa39■■■■□ 3.83
PGF-203ENST00000553716 CCDC88BA6NC98 1476 aa38.95■■■■□ 3.83
PGF-203ENST00000553716 EIF4G1Q04637 1599 aaKnown RBP38.91■■■■□ 3.82
PGF-203ENST00000553716 BAZ1BQ9UIG0 1483 aaKnown RBP38.74■■■■□ 3.79
PGF-203ENST00000553716 NCAPD3P42695 1498 aa38.61■■■■□ 3.77
PGF-203ENST00000553716 HMGXB3Q12766 1538 aa38.58■■■■□ 3.77
PGF-203ENST00000553716 TRIM41Q8WV44 630 aa38.5■■■■□ 3.75
PGF-203ENST00000553716 ABCC8Q09428 1581 aa38.22■■■■□ 3.71
PGF-203ENST00000553716 CC2D2AQ9P2K1 1620 aa38.19■■■■□ 3.7
PGF-203ENST00000553716 LOC105371045A0A1W2PR82 267 aa38.01■■■■□ 3.68
PGF-203ENST00000553716 WRNQ14191 1432 aaPredicted RBP eCLIP37.91■■■■□ 3.66
PGF-203ENST00000553716 CFTRP13569 1480 aa37.86■■■■□ 3.65
PGF-203ENST00000553716 SYNJ1O43426 1573 aa37.8■■■■□ 3.64
PGF-203ENST00000553716 FAM9AQ8IZU1 332 aaPredicted RBP37.78■■■■□ 3.64
PGF-203ENST00000553716 PRDM2Q13029 1718 aa37.7■■■■□ 3.63
PGF-203ENST00000553716 TOP2BQ02880 1626 aa37.61■■■■□ 3.61
PGF-203ENST00000553716 CADPSQ9ULU8 1353 aa37.61■■■■□ 3.61
PGF-203ENST00000553716 SOGA1O94964 1423 aa37.6■■■■□ 3.61
PGF-203ENST00000553716 BIVM-ERCC5R4GMW8 1640 aa37.58■■■■□ 3.61
PGF-203ENST00000553716 EEA1Q15075 1411 aa37.58■■■■□ 3.61
PGF-203ENST00000553716 RUSC2Q8N2Y8 1516 aa37.47■■■■□ 3.59
PGF-203ENST00000553716 CUX1P39880 1505 aa37.43■■■■□ 3.58
PGF-203ENST00000553716 CSRNP3Q8WYN3 585 aa37.31■■■■□ 3.56
PGF-203ENST00000553716 LAMC3Q9Y6N6 1575 aa37.19■■■■□ 3.54
PGF-203ENST00000553716 FANCD2Q9BXW9 1451 aa37.18■■■■□ 3.54
PGF-203ENST00000553716 EHMT2Q96KQ7 1210 aa37.18■■■■□ 3.54
PGF-203ENST00000553716 NESP48681 1621 aa37.17■■■■□ 3.54
PGF-203ENST00000553716 DNAJC5BQ9UF47 199 aa37.16■■■■□ 3.54
PGF-203ENST00000553716 KIF21BO75037 1637 aa37.11■■■■□ 3.53
PGF-203ENST00000553716 TNIKQ9UKE5 1360 aa37.06■■■■□ 3.52
PGF-203ENST00000553716 GOLGA3Q08378 1498 aa37.06■■■■□ 3.52
PGF-203ENST00000553716 CEP164Q9UPV0 1460 aa37.03■■■■□ 3.52
PGF-203ENST00000553716 DNMBPQ6XZF7 1577 aa36.94■■■■□ 3.5
PGF-203ENST00000553716 FGD5Q6ZNL6 1462 aa36.91■■■■□ 3.5
PGF-203ENST00000553716 KIF27Q86VH2 1401 aa36.9■■■■□ 3.5
PGF-203ENST00000553716 CEP162Q5TB80 1403 aa36.86■■■■□ 3.49
PGF-203ENST00000553716 TOPBP1Q92547 1522 aa36.85■■■■□ 3.49
PGF-203ENST00000553716 PDS5BQ9NTI5 1447 aa36.85■■■■□ 3.49
PGF-203ENST00000553716 PRXQ9BXM0 1461 aa36.84■■■■□ 3.49
PGF-203ENST00000553716 RAPGEF2Q9Y4G8 1499 aa36.81■■■■□ 3.48
PGF-203ENST00000553716 ERICH3Q5RHP9 1530 aa36.79■■■■□ 3.48
PGF-203ENST00000553716 UBTFP17480 764 aaKnown RBP36.77■■■■□ 3.48
PGF-203ENST00000553716 URB2Q14146 1524 aaKnown RBP36.75■■■■□ 3.47
PGF-203ENST00000553716 KIF21AQ7Z4S6 1674 aa36.72■■■■□ 3.47
PGF-203ENST00000553716 CUX2O14529 1486 aa36.72■■■■□ 3.47
PGF-203ENST00000553716 POLA1P09884 1462 aaPredicted RBP36.7■■■■□ 3.47
PGF-203ENST00000553716 ABCA10Q8WWZ4 1543 aa36.64■■■■□ 3.46
PGF-203ENST00000553716 IGF1RP08069 1367 aa36.6■■■■□ 3.45
PGF-203ENST00000553716 PCGF6Q9BYE7 350 aa36.6■■■■□ 3.45
PGF-203ENST00000553716 RAD54L2Q9Y4B4 1467 aa36.57■■■■□ 3.44
PGF-203ENST00000553716 TRIM26Q12899 539 aaPredicted RBP36.55■■■■□ 3.44
PGF-203ENST00000553716 WDR97A6NE52 1622 aa36.52■■■■□ 3.44
PGF-203ENST00000553716 CLIP1P30622 1438 aa36.47■■■■□ 3.43
PGF-203ENST00000553716 MRC2Q9UBG0 1479 aa36.38■■■■□ 3.41
PGF-203ENST00000553716 CARMIL1Q5VZK9 1371 aa36.37■■■■□ 3.41
PGF-203ENST00000553716 ABCA5Q8WWZ7 1642 aa36.32■■■■□ 3.41
PGF-203ENST00000553716 TARBP1Q13395 1621 aaKnown RBP36.32■■■■□ 3.4
PGF-203ENST00000553716 CUL7Q14999 1698 aa36.25■■■■□ 3.39
PGF-203ENST00000553716 VPS8Q8N3P4 1428 aa36.24■■■■□ 3.39
PGF-203ENST00000553716 WDR62O43379 1518 aa36.22■■■■□ 3.39
PGF-203ENST00000553716 GAPVD1Q14C86 1478 aa36.16■■■■□ 3.38
PGF-203ENST00000553716 TDRD9Q8NDG6 1382 aaKnown RBP36.15■■■■□ 3.38
PGF-203ENST00000553716 ARAP1Q96P48 1450 aa36.14■■■■□ 3.38
PGF-203ENST00000553716 PPARGC1BQ86YN6 1023 aaKnown RBP36.11■■■■□ 3.37
PGF-203ENST00000553716 ARHGAP35Q9NRY4 1499 aa36.06■■■■□ 3.36
PGF-203ENST00000553716 THOC2Q8NI27 1593 aaKnown RBP36.04■■■■□ 3.36
PGF-203ENST00000553716 ERCC6Q03468 1493 aa36■■■■□ 3.35
PGF-203ENST00000553716 RANGAP1P46060 587 aaPredicted RBP36■■■■□ 3.35
PGF-203ENST00000553716 IFT140Q96RY7 1462 aa36■■■■□ 3.35
PGF-203ENST00000553716 PBRM1Q86U86 1689 aa35.95■■■■□ 3.35
PGF-203ENST00000553716 HRCP23327 699 aa35.94■■■■□ 3.34
PGF-203ENST00000553716 CTTNBP2Q8WZ74 1663 aa35.91■■■■□ 3.34
PGF-203ENST00000553716 AQRO60306 1485 aaKnown RBP eCLIP35.87■■■■□ 3.336e-7■■■■□ 24.6
PGF-203ENST00000553716 ZNF608Q9ULD9 1512 aaPredicted RBP35.82■■■■□ 3.33
PGF-203ENST00000553716 GRIN2BQ13224 1484 aa35.82■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms