RNA–Protein interactions for RNA: ENST00000553372.1

PTGDR-202, Transcript of prostaglandin D2 receptor, humanhuman

TSL 3 BASIC

Gene PTGDR, Length 1,216 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTGDR-202ENST00000553372 NISCHQ9Y2I1 1504 aa53.68■■■■■ 6.18
PTGDR-202ENST00000553372 ABCC9O60706 1549 aa48.64■■■■■ 5.38
PTGDR-202ENST00000553372 CCDC180Q9P1Z9 1646 aa48.39■■■■■ 5.34
PTGDR-202ENST00000553372 RB1CC1Q8TDY2 1594 aa46.23■■■■■ 4.99
PTGDR-202ENST00000553372 DNAJC5BQ9UF47 199 aa45.93■■■■■ 4.94
PTGDR-202ENST00000553372 NACADO15069 1562 aa45.84■■■■■ 4.93
PTGDR-202ENST00000553372 DCAF8L2P0C7V8 631 aa45.42■■■■■ 4.86
PTGDR-202ENST00000553372 PABPN1Q86U42 306 aaKnown RBP eCLIP45.21■■■■■ 4.83
PTGDR-202ENST00000553372 UNC13AQ9UPW8 1703 aa45.14■■■■■ 4.82
PTGDR-202ENST00000553372 MYO15BQ96JP2 1530 aa45.12■■■■■ 4.81
PTGDR-202ENST00000553372 BICRAQ9NZM4 1560 aa44.83■■■■■ 4.77
PTGDR-202ENST00000553372 ZCCHC6Q5VYS8 1495 aaKnown RBP44.39■■■■■ 4.7
PTGDR-202ENST00000553372 DCAF1Q9Y4B6 1507 aa44.38■■■■■ 4.69
PTGDR-202ENST00000553372 SHROOM4Q9ULL8 1493 aa44.33■■■■■ 4.69
PTGDR-202ENST00000553372 CC2D2AQ9P2K1 1620 aa43.96■■■■■ 4.63
PTGDR-202ENST00000553372 SCRIBQ14160 1630 aa43.95■■■■■ 4.63
PTGDR-202ENST00000553372 CECR2Q9BXF3 1484 aa43.9■■■■■ 4.62
PTGDR-202ENST00000553372 EIF4G1Q04637 1599 aaKnown RBP43.79■■■■■ 4.6
PTGDR-202ENST00000553372 DNAJC5Q9H3Z4 198 aa42.57■■■■■ 4.41
PTGDR-202ENST00000553372 NCAPD3P42695 1498 aa42.31■■■■■ 4.36
PTGDR-202ENST00000553372 CUX2O14529 1486 aa42.19■■■■■ 4.34
PTGDR-202ENST00000553372 ERCC6Q03468 1493 aa42.09■■■■■ 4.33
PTGDR-202ENST00000553372 ATAD2BQ9ULI0 1458 aa42.08■■■■■ 4.33
PTGDR-202ENST00000553372 SMARCA2P51531 1590 aa42■■■■■ 4.31
PTGDR-202ENST00000553372 HMGXB3Q12766 1538 aa41.95■■■■■ 4.31
PTGDR-202ENST00000553372 SMARCA4P51532 1647 aa41.95■■■■■ 4.31
PTGDR-202ENST00000553372 BAZ1AQ9NRL2 1556 aaPredicted RBP41.71■■■■■ 4.27
PTGDR-202ENST00000553372 BAZ1BQ9UIG0 1483 aaKnown RBP41.66■■■■■ 4.26
PTGDR-202ENST00000553372 NESP48681 1621 aa41.66■■■■■ 4.26
PTGDR-202ENST00000553372 PEG3Q9GZU2 1588 aa41.59■■■■■ 4.25
PTGDR-202ENST00000553372 LAMC3Q9Y6N6 1575 aa41.42■■■■■ 4.22
PTGDR-202ENST00000553372 THOC2Q8NI27 1593 aaKnown RBP41.36■■■■■ 4.21
PTGDR-202ENST00000553372 MROH2BQ7Z745 1585 aa41.3■■■■■ 4.2
PTGDR-202ENST00000553372 PDS5BQ9NTI5 1447 aa41.21■■■■■ 4.19
PTGDR-202ENST00000553372 KIF21AQ7Z4S6 1674 aa41.15■■■■■ 4.18
PTGDR-202ENST00000553372 CADPSQ9ULU8 1353 aa40.99■■■■■ 4.15
PTGDR-202ENST00000553372 MRC2Q9UBG0 1479 aa40.83■■■■■ 4.13
PTGDR-202ENST00000553372 WIZO95785 1651 aa40.79■■■■■ 4.12
PTGDR-202ENST00000553372 WDR62O43379 1518 aa40.74■■■■■ 4.11
PTGDR-202ENST00000553372 CEP164Q9UPV0 1460 aa40.6■■■■■ 4.09
PTGDR-202ENST00000553372 FANCD2Q9BXW9 1451 aa40.5■■■■■ 4.07
PTGDR-202ENST00000553372 TRIM41Q8WV44 630 aa40.47■■■■■ 4.07
PTGDR-202ENST00000553372 CFTRP13569 1480 aa40.44■■■■■ 4.06
PTGDR-202ENST00000553372 RSF1Q96T23 1441 aaPredicted RBP40.33■■■■■ 4.05
PTGDR-202ENST00000553372 TOP2AP11388 1531 aaKnown RBP40.3■■■■■ 4.04
PTGDR-202ENST00000553372 OSCARQ8IYS5 282 aa40.2■■■■■ 4.03
PTGDR-202ENST00000553372 URB2Q14146 1524 aaKnown RBP40.16■■■■■ 4.02
PTGDR-202ENST00000553372 PRDM2Q13029 1718 aa40.04■■■■■ 4
PTGDR-202ENST00000553372 CCDC88BA6NC98 1476 aa39.81■■■■□ 3.96
PTGDR-202ENST00000553372 IFT140Q96RY7 1462 aa39.81■■■■□ 3.96
PTGDR-202ENST00000553372 ZNF608Q9ULD9 1512 aaPredicted RBP39.7■■■■□ 3.95
PTGDR-202ENST00000553372 ABCC8Q09428 1581 aa39.68■■■■□ 3.94
PTGDR-202ENST00000553372 TOPBP1Q92547 1522 aa39.68■■■■□ 3.94
PTGDR-202ENST00000553372 RIMBP3CA6NJZ7 1639 aa39.65■■■■□ 3.94
PTGDR-202ENST00000553372 RIMBP3BA6NNM3 1639 aa39.65■■■■□ 3.94
PTGDR-202ENST00000553372 RIMBP3Q9UFD9 1639 aa39.65■■■■□ 3.94
PTGDR-202ENST00000553372 DNMBPQ6XZF7 1577 aa39.53■■■■□ 3.92
PTGDR-202ENST00000553372 EIF4G3O43432 1585 aaKnown RBP39.5■■■■□ 3.91
PTGDR-202ENST00000553372 ARHGEF11O15085 1522 aa39.49■■■■□ 3.91
PTGDR-202ENST00000553372 TARBP1Q13395 1621 aaKnown RBP39.36■■■■□ 3.89
PTGDR-202ENST00000553372 AQRO60306 1485 aaKnown RBP eCLIP39.31■■■■□ 3.88
PTGDR-202ENST00000553372 CHD1O14646 1710 aa39.29■■■■□ 3.88
PTGDR-202ENST00000553372 POLA1P09884 1462 aaPredicted RBP39.25■■■■□ 3.87
PTGDR-202ENST00000553372 CYB5RLQ6IPT4 315 aa39.23■■■■□ 3.87
PTGDR-202ENST00000553372 FBLN2P98095 1184 aa39.15■■■■□ 3.86
PTGDR-202ENST00000553372 SOGA1O94964 1423 aa39.09■■■■□ 3.85
PTGDR-202ENST00000553372 SUPT5HO00267 1087 aaKnown RBP39.08■■■■□ 3.85
PTGDR-202ENST00000553372 RAD54L2Q9Y4B4 1467 aa39.07■■■■□ 3.85
PTGDR-202ENST00000553372 ARAP1Q96P48 1450 aa39.05■■■■□ 3.84
PTGDR-202ENST00000553372 WDR97A6NE52 1622 aa39.04■■■■□ 3.84
PTGDR-202ENST00000553372 TDRD9Q8NDG6 1382 aaKnown RBP39.01■■■■□ 3.84
PTGDR-202ENST00000553372 FGD5Q6ZNL6 1462 aa38.94■■■■□ 3.82
PTGDR-202ENST00000553372 TRHP20396 242 aaPredicted RBP38.93■■■■□ 3.82
PTGDR-202ENST00000553372 SNAPC4Q5SXM2 1469 aa38.92■■■■□ 3.82
PTGDR-202ENST00000553372 MAGI1Q96QZ7 1491 aaPredicted RBP38.86■■■■□ 3.81
PTGDR-202ENST00000553372 CHMP7Q8WUX9 453 aaPredicted RBP38.85■■■■□ 3.81
PTGDR-202ENST00000553372 CUX1P39880 1505 aa38.84■■■■□ 3.81
PTGDR-202ENST00000553372 CLASP1Q7Z460 1538 aa38.84■■■■□ 3.81
PTGDR-202ENST00000553372 SYNJ1O43426 1573 aa38.82■■■■□ 3.81
PTGDR-202ENST00000553372 GRIN2BQ13224 1484 aa38.81■■■■□ 3.8
PTGDR-202ENST00000553372 SYNJ2O15056 1496 aa38.73■■■■□ 3.79
PTGDR-202ENST00000553372 GAPVD1Q14C86 1478 aa38.61■■■■□ 3.77
PTGDR-202ENST00000553372 PBRM1Q86U86 1689 aa38.61■■■■□ 3.77
PTGDR-202ENST00000553372 ABCA10Q8WWZ4 1543 aa38.52■■■■□ 3.76
PTGDR-202ENST00000553372 ABCA5Q8WWZ7 1642 aa38.47■■■■□ 3.75
PTGDR-202ENST00000553372 WRNQ14191 1432 aaPredicted RBP eCLIP38.3■■■■□ 3.72
PTGDR-202ENST00000553372 GRIN2AQ12879 1464 aa38.28■■■■□ 3.72
PTGDR-202ENST00000553372 ADAMTS12P58397 1594 aa38.21■■■■□ 3.71
PTGDR-202ENST00000553372 NUP160Q12769 1436 aa38.19■■■■□ 3.7
PTGDR-202ENST00000553372 TOP2BQ02880 1626 aa38.16■■■■□ 3.7
PTGDR-202ENST00000553372 BIVM-ERCC5R4GMW8 1640 aa38.16■■■■□ 3.7
PTGDR-202ENST00000553372 CEP170Q5SW79 1584 aa38.14■■■■□ 3.7
PTGDR-202ENST00000553372 ERCC6L2Q5T890 1561 aa38.13■■■■□ 3.69
PTGDR-202ENST00000553372 FHAD1B1AJZ9 1412 aa38.12■■■■□ 3.69
PTGDR-202ENST00000553372 AEBP2Q6ZN18 517 aaPredicted RBP38.11■■■■□ 3.69
PTGDR-202ENST00000553372 SHROOM2Q13796 1616 aa38.06■■■■□ 3.68
PTGDR-202ENST00000553372 ERICH3Q5RHP9 1530 aa38.05■■■■□ 3.68
PTGDR-202ENST00000553372 PRG4Q92954 1404 aaPredicted RBP37.83■■■■□ 3.65
PTGDR-202ENST00000553372 JPH4Q96JJ6 628 aa37.81■■■■□ 3.64
PTGDR-202ENST00000553372 KIF13AQ9H1H9 1805 aa37.75■■■■□ 3.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms