RNA–Protein interactions for RNA: ENST00000373991.3

SCAND1-202, Transcript of SCAN domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAND1, Length 1,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAND1-202ENST00000373991 NISCHQ9Y2I1 1504 aa52.13■■■■■ 5.93
SCAND1-202ENST00000373991 CCDC180Q9P1Z9 1646 aa45.88■■■■■ 4.93
SCAND1-202ENST00000373991 ABCC9O60706 1549 aa44.31■■■■■ 4.68
SCAND1-202ENST00000373991 ZCCHC6Q5VYS8 1495 aaKnown RBP43.56■■■■■ 4.56
SCAND1-202ENST00000373991 DCAF8L2P0C7V8 631 aa43.45■■■■■ 4.55
SCAND1-202ENST00000373991 DCAF1Q9Y4B6 1507 aa43.09■■■■■ 4.49
SCAND1-202ENST00000373991 NACADO15069 1562 aa43■■■■■ 4.47
SCAND1-202ENST00000373991 MYO15BQ96JP2 1530 aa42.97■■■■■ 4.47
SCAND1-202ENST00000373991 RB1CC1Q8TDY2 1594 aa42.87■■■■■ 4.45
SCAND1-202ENST00000373991 SCRIBQ14160 1630 aa42.05■■■■■ 4.32
SCAND1-202ENST00000373991 UNC13AQ9UPW8 1703 aa41.86■■■■■ 4.29
SCAND1-202ENST00000373991 SHROOM4Q9ULL8 1493 aa41.83■■■■■ 4.29
SCAND1-202ENST00000373991 PABPN1Q86U42 306 aaKnown RBP eCLIP41.62■■■■■ 4.25
SCAND1-202ENST00000373991 BICRAQ9NZM4 1560 aa41.56■■■■■ 4.24
SCAND1-202ENST00000373991 CECR2Q9BXF3 1484 aa40.58■■■■■ 4.09
SCAND1-202ENST00000373991 EIF4G1Q04637 1599 aaKnown RBP40.4■■■■■ 4.06
SCAND1-202ENST00000373991 BAZ1AQ9NRL2 1556 aaPredicted RBP40.33■■■■■ 4.05
SCAND1-202ENST00000373991 SMARCA4P51532 1647 aa40.25■■■■■ 4.03
SCAND1-202ENST00000373991 MROH2BQ7Z745 1585 aa40.22■■■■■ 4.03
SCAND1-202ENST00000373991 RSF1Q96T23 1441 aaPredicted RBP40.06■■■■■ 4
SCAND1-202ENST00000373991 CC2D2AQ9P2K1 1620 aa40.05■■■■■ 4
SCAND1-202ENST00000373991 DNAJC5BQ9UF47 199 aa40.01■■■■■ 4
SCAND1-202ENST00000373991 ATAD2BQ9ULI0 1458 aa39.87■■■■□ 3.97
SCAND1-202ENST00000373991 SMARCA2P51531 1590 aa39.82■■■■□ 3.97
SCAND1-202ENST00000373991 WIZO95785 1651 aa39.81■■■■□ 3.96
SCAND1-202ENST00000373991 PEG3Q9GZU2 1588 aa39.8■■■■□ 3.96
SCAND1-202ENST00000373991 SUPT5HO00267 1087 aaKnown RBP39.79■■■■□ 3.96
SCAND1-202ENST00000373991 NCAPD3P42695 1498 aa39.71■■■■□ 3.95
SCAND1-202ENST00000373991 BAZ1BQ9UIG0 1483 aaKnown RBP39.59■■■■□ 3.93
SCAND1-202ENST00000373991 HMGXB3Q12766 1538 aa39.54■■■■□ 3.92
SCAND1-202ENST00000373991 TOP2AP11388 1531 aaKnown RBP39.4■■■■□ 3.9
SCAND1-202ENST00000373991 CCDC88BA6NC98 1476 aa39■■■■□ 3.83
SCAND1-202ENST00000373991 CADPSQ9ULU8 1353 aa38.64■■■■□ 3.78
SCAND1-202ENST00000373991 NESP48681 1621 aa38.57■■■■□ 3.77
SCAND1-202ENST00000373991 CFTRP13569 1480 aa38.55■■■■□ 3.76
SCAND1-202ENST00000373991 LAMC3Q9Y6N6 1575 aa38.5■■■■□ 3.75
SCAND1-202ENST00000373991 PDS5BQ9NTI5 1447 aa38.28■■■■□ 3.72
SCAND1-202ENST00000373991 PRDM2Q13029 1718 aa38.19■■■■□ 3.7
SCAND1-202ENST00000373991 FANCD2Q9BXW9 1451 aa38.18■■■■□ 3.7
SCAND1-202ENST00000373991 ERCC6Q03468 1493 aa38.11■■■■□ 3.69
SCAND1-202ENST00000373991 KIF21AQ7Z4S6 1674 aa38.05■■■■□ 3.68
SCAND1-202ENST00000373991 CEP164Q9UPV0 1460 aa38.04■■■■□ 3.68
SCAND1-202ENST00000373991 ABCC8Q09428 1581 aa37.83■■■■□ 3.65
SCAND1-202ENST00000373991 MRC2Q9UBG0 1479 aa37.81■■■■□ 3.64
SCAND1-202ENST00000373991 WRNQ14191 1432 aaPredicted RBP eCLIP37.75■■■■□ 3.63
SCAND1-202ENST00000373991 URB2Q14146 1524 aaKnown RBP37.75■■■■□ 3.63
SCAND1-202ENST00000373991 THOC2Q8NI27 1593 aaKnown RBP37.71■■■■□ 3.63
SCAND1-202ENST00000373991 CUX1P39880 1505 aa37.66■■■■□ 3.62
SCAND1-202ENST00000373991 TOPBP1Q92547 1522 aa37.65■■■■□ 3.62
SCAND1-202ENST00000373991 DNMBPQ6XZF7 1577 aa37.64■■■■□ 3.62
SCAND1-202ENST00000373991 WDR62O43379 1518 aa37.62■■■■□ 3.61
SCAND1-202ENST00000373991 SYNJ1O43426 1573 aa37.58■■■■□ 3.61
SCAND1-202ENST00000373991 CHIC1Q5VXU3 224 aa37.56■■■■□ 3.6
SCAND1-202ENST00000373991 TOP2BQ02880 1626 aa37.52■■■■□ 3.6
SCAND1-202ENST00000373991 TRIM41Q8WV44 630 aa37.51■■■■□ 3.6
SCAND1-202ENST00000373991 BIVM-ERCC5R4GMW8 1640 aa37.48■■■■□ 3.59
SCAND1-202ENST00000373991 FGD5Q6ZNL6 1462 aa37.42■■■■□ 3.58
SCAND1-202ENST00000373991 POLA1P09884 1462 aaPredicted RBP37.39■■■■□ 3.58
SCAND1-202ENST00000373991 CUX2O14529 1486 aa37.33■■■■□ 3.57
SCAND1-202ENST00000373991 SOGA1O94964 1423 aa37.3■■■■□ 3.56
SCAND1-202ENST00000373991 RAD54L2Q9Y4B4 1467 aa37.27■■■■□ 3.56
SCAND1-202ENST00000373991 IFT140Q96RY7 1462 aa37.2■■■■□ 3.55
SCAND1-202ENST00000373991 TARBP1Q13395 1621 aaKnown RBP37.14■■■■□ 3.54
SCAND1-202ENST00000373991 ABCA10Q8WWZ4 1543 aa37.07■■■■□ 3.53
SCAND1-202ENST00000373991 TDRD9Q8NDG6 1382 aaKnown RBP37.02■■■■□ 3.52
SCAND1-202ENST00000373991 ZNF608Q9ULD9 1512 aaPredicted RBP37.02■■■■□ 3.52
SCAND1-202ENST00000373991 WDR97A6NE52 1622 aa36.97■■■■□ 3.51
SCAND1-202ENST00000373991 AQRO60306 1485 aaKnown RBP eCLIP36.94■■■■□ 3.5
SCAND1-202ENST00000373991 KIF27Q86VH2 1401 aa36.9■■■■□ 3.5
SCAND1-202ENST00000373991 RUSC2Q8N2Y8 1516 aa36.86■■■■□ 3.49
SCAND1-202ENST00000373991 GAPVD1Q14C86 1478 aa36.85■■■■□ 3.49
SCAND1-202ENST00000373991 EIF4G3O43432 1585 aaKnown RBP36.84■■■■□ 3.49
SCAND1-202ENST00000373991 ABCA5Q8WWZ7 1642 aa36.81■■■■□ 3.48
SCAND1-202ENST00000373991 FAM9AQ8IZU1 332 aaPredicted RBP36.78■■■■□ 3.48
SCAND1-202ENST00000373991 GRIN2BQ13224 1484 aa36.72■■■■□ 3.47
SCAND1-202ENST00000373991 EEA1Q15075 1411 aa36.68■■■■□ 3.46
SCAND1-202ENST00000373991 IGF1RP08069 1367 aa36.67■■■■□ 3.46
SCAND1-202ENST00000373991 PBRM1Q86U86 1689 aa36.63■■■■□ 3.45
SCAND1-202ENST00000373991 ERICH3Q5RHP9 1530 aa36.63■■■■□ 3.45
SCAND1-202ENST00000373991 CSRNP3Q8WYN3 585 aa36.62■■■■□ 3.45
SCAND1-202ENST00000373991 SNAPC4Q5SXM2 1469 aa36.57■■■■□ 3.44
SCAND1-202ENST00000373991 MAGI1Q96QZ7 1491 aaPredicted RBP36.51■■■■□ 3.43
SCAND1-202ENST00000373991 CARMIL1Q5VZK9 1371 aa36.48■■■■□ 3.43
SCAND1-202ENST00000373991 FHAD1B1AJZ9 1412 aa36.44■■■■□ 3.42
SCAND1-202ENST00000373991 FBLN2P98095 1184 aa36.43■■■■□ 3.42
SCAND1-202ENST00000373991 CUL7Q14999 1698 aa36.42■■■■□ 3.42
SCAND1-202ENST00000373991 CHMP7Q8WUX9 453 aaPredicted RBP36.41■■■■□ 3.42
SCAND1-202ENST00000373991 ADAMTS12P58397 1594 aa36.41■■■■□ 3.42
SCAND1-202ENST00000373991 SYNJ2O15056 1496 aa36.38■■■■□ 3.41
SCAND1-202ENST00000373991 PRXQ9BXM0 1461 aa36.37■■■■□ 3.41
SCAND1-202ENST00000373991 RAPGEF2Q9Y4G8 1499 aa36.32■■■■□ 3.4
SCAND1-202ENST00000373991 EHMT2Q96KQ7 1210 aa36.29■■■■□ 3.4
SCAND1-202ENST00000373991 GRIN2AQ12879 1464 aa36.25■■■■□ 3.39
SCAND1-202ENST00000373991 KIF21BO75037 1637 aa36.21■■■■□ 3.39
SCAND1-202ENST00000373991 CHD1O14646 1710 aa36.2■■■■□ 3.39
SCAND1-202ENST00000373991 GOLGA3Q08378 1498 aa36.12■■■■□ 3.37
SCAND1-202ENST00000373991 LOC105371045A0A1W2PR82 267 aa36.1■■■■□ 3.37
SCAND1-202ENST00000373991 UBTFP17480 764 aaKnown RBP36.08■■■■□ 3.37
SCAND1-202ENST00000373991 OSCARQ8IYS5 282 aa36.07■■■■□ 3.36
SCAND1-202ENST00000373991 NUP160Q12769 1436 aa36.03■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms