RNA–Protein interactions for RNA: ENST00000394998.5

STX4-202, Transcript of syntaxin 4, humanhuman

TSL 2 BASIC

Gene STX4, Length 1,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX4-202ENST00000394998 NISCHQ9Y2I1 1504 aa52.42■■■■■ 5.98
STX4-202ENST00000394998 CCDC180Q9P1Z9 1646 aa46.22■■■■■ 4.99
STX4-202ENST00000394998 ABCC9O60706 1549 aa44.8■■■■■ 4.76
STX4-202ENST00000394998 ZCCHC6Q5VYS8 1495 aaKnown RBP43.76■■■■■ 4.6
STX4-202ENST00000394998 DCAF8L2P0C7V8 631 aa43.64■■■■■ 4.58
STX4-202ENST00000394998 NACADO15069 1562 aa43.41■■■■■ 4.54
STX4-202ENST00000394998 DCAF1Q9Y4B6 1507 aa43.38■■■■■ 4.54
STX4-202ENST00000394998 MYO15BQ96JP2 1530 aa43.35■■■■■ 4.53
STX4-202ENST00000394998 RB1CC1Q8TDY2 1594 aa43.29■■■■■ 4.52
STX4-202ENST00000394998 SCRIBQ14160 1630 aa42.28■■■■■ 4.36
STX4-202ENST00000394998 UNC13AQ9UPW8 1703 aa42.23■■■■■ 4.35
STX4-202ENST00000394998 PABPN1Q86U42 306 aaKnown RBP eCLIP42.05■■■■■ 4.32
STX4-202ENST00000394998 BICRAQ9NZM4 1560 aa41.99■■■■■ 4.31
STX4-202ENST00000394998 SHROOM4Q9ULL8 1493 aa41.8■■■■■ 4.28
STX4-202ENST00000394998 EIF4G1Q04637 1599 aaKnown RBP40.82■■■■■ 4.13
STX4-202ENST00000394998 CECR2Q9BXF3 1484 aa40.81■■■■■ 4.12
STX4-202ENST00000394998 DNAJC5BQ9UF47 199 aa40.72■■■■■ 4.11
STX4-202ENST00000394998 BAZ1AQ9NRL2 1556 aaPredicted RBP40.55■■■■■ 4.08
STX4-202ENST00000394998 CC2D2AQ9P2K1 1620 aa40.51■■■■■ 4.08
STX4-202ENST00000394998 SMARCA4P51532 1647 aa40.5■■■■■ 4.07
STX4-202ENST00000394998 MROH2BQ7Z745 1585 aa40.42■■■■■ 4.06
STX4-202ENST00000394998 ATAD2BQ9ULI0 1458 aa40.21■■■■■ 4.03
STX4-202ENST00000394998 RSF1Q96T23 1441 aaPredicted RBP40.2■■■■■ 4.03
STX4-202ENST00000394998 SMARCA2P51531 1590 aa40.13■■■■■ 4.01
STX4-202ENST00000394998 PEG3Q9GZU2 1588 aa40.11■■■■■ 4.01
STX4-202ENST00000394998 NCAPD3P42695 1498 aa40.11■■■■■ 4.01
STX4-202ENST00000394998 WIZO95785 1651 aa39.96■■■■□ 3.99
STX4-202ENST00000394998 HMGXB3Q12766 1538 aa39.89■■■■□ 3.98
STX4-202ENST00000394998 BAZ1BQ9UIG0 1483 aaKnown RBP39.87■■■■□ 3.97
STX4-202ENST00000394998 SUPT5HO00267 1087 aaKnown RBP39.65■■■■□ 3.94
STX4-202ENST00000394998 TOP2AP11388 1531 aaKnown RBP39.58■■■■□ 3.93
STX4-202ENST00000394998 CCDC88BA6NC98 1476 aa39.18■■■■□ 3.86
STX4-202ENST00000394998 CADPSQ9ULU8 1353 aa38.99■■■■□ 3.83
STX4-202ENST00000394998 NESP48681 1621 aa38.95■■■■□ 3.83
STX4-202ENST00000394998 LAMC3Q9Y6N6 1575 aa38.87■■■■□ 3.81
STX4-202ENST00000394998 CFTRP13569 1480 aa38.85■■■■□ 3.81
STX4-202ENST00000394998 PDS5BQ9NTI5 1447 aa38.66■■■■□ 3.78
STX4-202ENST00000394998 ERCC6Q03468 1493 aa38.55■■■■□ 3.76
STX4-202ENST00000394998 FANCD2Q9BXW9 1451 aa38.5■■■■□ 3.75
STX4-202ENST00000394998 PRDM2Q13029 1718 aa38.4■■■■□ 3.74
STX4-202ENST00000394998 KIF21AQ7Z4S6 1674 aa38.39■■■■□ 3.74
STX4-202ENST00000394998 CEP164Q9UPV0 1460 aa38.36■■■■□ 3.73
STX4-202ENST00000394998 MRC2Q9UBG0 1479 aa38.2■■■■□ 3.71
STX4-202ENST00000394998 THOC2Q8NI27 1593 aaKnown RBP38.15■■■■□ 3.7
STX4-202ENST00000394998 URB2Q14146 1524 aaKnown RBP38.08■■■■□ 3.69
STX4-202ENST00000394998 WDR62O43379 1518 aa38.04■■■■□ 3.68
STX4-202ENST00000394998 ABCC8Q09428 1581 aa37.96■■■■□ 3.67
STX4-202ENST00000394998 TOPBP1Q92547 1522 aa37.94■■■■□ 3.66
STX4-202ENST00000394998 CUX2O14529 1486 aa37.93■■■■□ 3.66
STX4-202ENST00000394998 DNMBPQ6XZF7 1577 aa37.91■■■■□ 3.66
STX4-202ENST00000394998 CUX1P39880 1505 aa37.87■■■■□ 3.65
STX4-202ENST00000394998 WRNQ14191 1432 aaPredicted RBP eCLIP37.86■■■■□ 3.65
STX4-202ENST00000394998 SYNJ1O43426 1573 aa37.69■■■■□ 3.62
STX4-202ENST00000394998 TOP2BQ02880 1626 aa37.66■■■■□ 3.62
STX4-202ENST00000394998 POLA1P09884 1462 aaPredicted RBP37.66■■■■□ 3.62
STX4-202ENST00000394998 FGD5Q6ZNL6 1462 aa37.64■■■■□ 3.62
STX4-202ENST00000394998 BIVM-ERCC5R4GMW8 1640 aa37.61■■■■□ 3.61
STX4-202ENST00000394998 IFT140Q96RY7 1462 aa37.56■■■■□ 3.6
STX4-202ENST00000394998 SOGA1O94964 1423 aa37.56■■■■□ 3.6
STX4-202ENST00000394998 RAD54L2Q9Y4B4 1467 aa37.52■■■■□ 3.6
STX4-202ENST00000394998 TARBP1Q13395 1621 aaKnown RBP37.45■■■■□ 3.59
STX4-202ENST00000394998 TRIM41Q8WV44 630 aa37.41■■■■□ 3.58
STX4-202ENST00000394998 CHIC1Q5VXU3 224 aa37.38■■■■□ 3.57
STX4-202ENST00000394998 ZNF608Q9ULD9 1512 aaPredicted RBP37.36■■■■□ 3.57
STX4-202ENST00000394998 ABCA10Q8WWZ4 1543 aa37.33■■■■□ 3.57
STX4-202ENST00000394998 TDRD9Q8NDG6 1382 aaKnown RBP37.29■■■■□ 3.56
STX4-202ENST00000394998 AQRO60306 1485 aaKnown RBP eCLIP37.26■■■■□ 3.55
STX4-202ENST00000394998 WDR97A6NE52 1622 aa37.21■■■■□ 3.55
STX4-202ENST00000394998 EIF4G3O43432 1585 aaKnown RBP37.14■■■■□ 3.54
STX4-202ENST00000394998 GAPVD1Q14C86 1478 aa37.11■■■■□ 3.53
STX4-202ENST00000394998 ABCA5Q8WWZ7 1642 aa37.06■■■■□ 3.52
STX4-202ENST00000394998 KIF27Q86VH2 1401 aa37.03■■■■□ 3.52
STX4-202ENST00000394998 GRIN2BQ13224 1484 aa37.01■■■■□ 3.52
STX4-202ENST00000394998 RUSC2Q8N2Y8 1516 aa36.89■■■■□ 3.5
STX4-202ENST00000394998 IGF1RP08069 1367 aa36.87■■■■□ 3.49
STX4-202ENST00000394998 SNAPC4Q5SXM2 1469 aa36.87■■■■□ 3.49
STX4-202ENST00000394998 ERICH3Q5RHP9 1530 aa36.86■■■■□ 3.49
STX4-202ENST00000394998 PBRM1Q86U86 1689 aa36.85■■■■□ 3.49
STX4-202ENST00000394998 MAGI1Q96QZ7 1491 aaPredicted RBP36.84■■■■□ 3.49
STX4-202ENST00000394998 DNAJC5Q9H3Z4 198 aa36.78■■■■□ 3.48
STX4-202ENST00000394998 FHAD1B1AJZ9 1412 aa36.71■■■■□ 3.47
STX4-202ENST00000394998 FBLN2P98095 1184 aa36.7■■■■□ 3.47
STX4-202ENST00000394998 CHMP7Q8WUX9 453 aaPredicted RBP36.7■■■■□ 3.47
STX4-202ENST00000394998 SYNJ2O15056 1496 aa36.69■■■■□ 3.46
STX4-202ENST00000394998 EEA1Q15075 1411 aa36.69■■■■□ 3.46
STX4-202ENST00000394998 ADAMTS12P58397 1594 aa36.66■■■■□ 3.46
STX4-202ENST00000394998 CSRNP3Q8WYN3 585 aa36.64■■■■□ 3.46
STX4-202ENST00000394998 CARMIL1Q5VZK9 1371 aa36.64■■■■□ 3.46
STX4-202ENST00000394998 FAM9AQ8IZU1 332 aaPredicted RBP36.63■■■■□ 3.45
STX4-202ENST00000394998 CUL7Q14999 1698 aa36.57■■■■□ 3.44
STX4-202ENST00000394998 OSCARQ8IYS5 282 aa36.56■■■■□ 3.44
STX4-202ENST00000394998 CHD1O14646 1710 aa36.53■■■■□ 3.44
STX4-202ENST00000394998 GRIN2AQ12879 1464 aa36.52■■■■□ 3.44
STX4-202ENST00000394998 PRXQ9BXM0 1461 aa36.48■■■■□ 3.43
STX4-202ENST00000394998 RAPGEF2Q9Y4G8 1499 aa36.44■■■■□ 3.42
STX4-202ENST00000394998 NUP160Q12769 1436 aa36.37■■■■□ 3.41
STX4-202ENST00000394998 CEP170Q5SW79 1584 aa36.3■■■■□ 3.4
STX4-202ENST00000394998 CLASP1Q7Z460 1538 aa36.23■■■■□ 3.39
STX4-202ENST00000394998 KIF21BO75037 1637 aa36.2■■■■□ 3.39
STX4-202ENST00000394998 KIAA0586Q9BVV6 1533 aa36.16■■■■□ 3.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms