RNA–Protein interactions for RNA: ENST00000615853.1

H2AFB3-201, Transcript of H2A histone family member B3, humanhuman

APPRIS P1 BASIC

Gene H2AFB3, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFB3-201ENST00000615853 NISCHQ9Y2I1 1504 aa53.26■■■■■ 6.12
H2AFB3-201ENST00000615853 CCDC180Q9P1Z9 1646 aa47.59■■■■■ 5.21
H2AFB3-201ENST00000615853 ABCC9O60706 1549 aa47.36■■■■■ 5.17
H2AFB3-201ENST00000615853 RB1CC1Q8TDY2 1594 aa45.2■■■■■ 4.83
H2AFB3-201ENST00000615853 NACADO15069 1562 aa44.99■■■■■ 4.79
H2AFB3-201ENST00000615853 DCAF8L2P0C7V8 631 aa44.81■■■■■ 4.76
H2AFB3-201ENST00000615853 MYO15BQ96JP2 1530 aa44.5■■■■■ 4.71
H2AFB3-201ENST00000615853 DNAJC5BQ9UF47 199 aa44.24■■■■■ 4.67
H2AFB3-201ENST00000615853 ZCCHC6Q5VYS8 1495 aaKnown RBP44.19■■■■■ 4.66
H2AFB3-201ENST00000615853 PABPN1Q86U42 306 aaKnown RBP eCLIP44.18■■■■■ 4.66
H2AFB3-201ENST00000615853 UNC13AQ9UPW8 1703 aa44.06■■■■■ 4.64
H2AFB3-201ENST00000615853 DCAF1Q9Y4B6 1507 aa44.03■■■■■ 4.64
H2AFB3-201ENST00000615853 BICRAQ9NZM4 1560 aa43.88■■■■■ 4.62
H2AFB3-201ENST00000615853 SCRIBQ14160 1630 aa43.38■■■■■ 4.54
H2AFB3-201ENST00000615853 SHROOM4Q9ULL8 1493 aa43.37■■■■■ 4.53
H2AFB3-201ENST00000615853 CC2D2AQ9P2K1 1620 aa42.78■■■■■ 4.44
H2AFB3-201ENST00000615853 EIF4G1Q04637 1599 aaKnown RBP42.78■■■■■ 4.44
H2AFB3-201ENST00000615853 CECR2Q9BXF3 1484 aa42.66■■■■■ 4.42
H2AFB3-201ENST00000615853 NCAPD3P42695 1498 aa41.57■■■■■ 4.25
H2AFB3-201ENST00000615853 ATAD2BQ9ULI0 1458 aa41.47■■■■■ 4.23
H2AFB3-201ENST00000615853 SMARCA4P51532 1647 aa41.44■■■■■ 4.22
H2AFB3-201ENST00000615853 SMARCA2P51531 1590 aa41.33■■■■■ 4.21
H2AFB3-201ENST00000615853 BAZ1AQ9NRL2 1556 aaPredicted RBP41.29■■■■■ 4.2
H2AFB3-201ENST00000615853 HMGXB3Q12766 1538 aa41.23■■■■■ 4.19
H2AFB3-201ENST00000615853 PEG3Q9GZU2 1588 aa41.07■■■■■ 4.16
H2AFB3-201ENST00000615853 BAZ1BQ9UIG0 1483 aaKnown RBP41.04■■■■■ 4.16
H2AFB3-201ENST00000615853 MROH2BQ7Z745 1585 aa41.03■■■■■ 4.16
H2AFB3-201ENST00000615853 ERCC6Q03468 1493 aa40.87■■■■■ 4.13
H2AFB3-201ENST00000615853 NESP48681 1621 aa40.77■■■■■ 4.12
H2AFB3-201ENST00000615853 CUX2O14529 1486 aa40.73■■■■■ 4.11
H2AFB3-201ENST00000615853 LAMC3Q9Y6N6 1575 aa40.52■■■■■ 4.08
H2AFB3-201ENST00000615853 WIZO95785 1651 aa40.49■■■■■ 4.07
H2AFB3-201ENST00000615853 DNAJC5Q9H3Z4 198 aa40.43■■■■■ 4.06
H2AFB3-201ENST00000615853 CADPSQ9ULU8 1353 aa40.33■■■■■ 4.05
H2AFB3-201ENST00000615853 PDS5BQ9NTI5 1447 aa40.33■■■■■ 4.05
H2AFB3-201ENST00000615853 RSF1Q96T23 1441 aaPredicted RBP40.32■■■■■ 4.04
H2AFB3-201ENST00000615853 THOC2Q8NI27 1593 aaKnown RBP40.27■■■■■ 4.04
H2AFB3-201ENST00000615853 KIF21AQ7Z4S6 1674 aa40.17■■■■■ 4.02
H2AFB3-201ENST00000615853 TOP2AP11388 1531 aaKnown RBP40.05■■■■■ 4
H2AFB3-201ENST00000615853 MRC2Q9UBG0 1479 aa39.94■■■■□ 3.98
H2AFB3-201ENST00000615853 CFTRP13569 1480 aa39.91■■■■□ 3.98
H2AFB3-201ENST00000615853 FANCD2Q9BXW9 1451 aa39.82■■■■□ 3.97
H2AFB3-201ENST00000615853 CEP164Q9UPV0 1460 aa39.82■■■■□ 3.97
H2AFB3-201ENST00000615853 WDR62O43379 1518 aa39.82■■■■□ 3.97
H2AFB3-201ENST00000615853 CCDC88BA6NC98 1476 aa39.62■■■■□ 3.93
H2AFB3-201ENST00000615853 URB2Q14146 1524 aaKnown RBP39.47■■■■□ 3.91
H2AFB3-201ENST00000615853 PRDM2Q13029 1718 aa39.37■■■■□ 3.89
H2AFB3-201ENST00000615853 TOPBP1Q92547 1522 aa39.09■■■■□ 3.85
H2AFB3-201ENST00000615853 ABCC8Q09428 1581 aa39.06■■■■□ 3.84
H2AFB3-201ENST00000615853 IFT140Q96RY7 1462 aa39.05■■■■□ 3.84
H2AFB3-201ENST00000615853 DNMBPQ6XZF7 1577 aa38.96■■■■□ 3.83
H2AFB3-201ENST00000615853 OSCARQ8IYS5 282 aa38.95■■■■□ 3.83
H2AFB3-201ENST00000615853 ZNF608Q9ULD9 1512 aaPredicted RBP38.94■■■■□ 3.82
H2AFB3-201ENST00000615853 POLA1P09884 1462 aaPredicted RBP38.73■■■■□ 3.79
H2AFB3-201ENST00000615853 TARBP1Q13395 1621 aaKnown RBP38.71■■■■□ 3.79
H2AFB3-201ENST00000615853 SUPT5HO00267 1087 aaKnown RBP38.71■■■■□ 3.79
H2AFB3-201ENST00000615853 TRIM41Q8WV44 630 aa38.71■■■■□ 3.79
H2AFB3-201ENST00000615853 EIF4G3O43432 1585 aaKnown RBP38.69■■■■□ 3.78
H2AFB3-201ENST00000615853 AQRO60306 1485 aaKnown RBP eCLIP38.64■■■■□ 3.78
H2AFB3-201ENST00000615853 SOGA1O94964 1423 aa38.57■■■■□ 3.77
H2AFB3-201ENST00000615853 RAD54L2Q9Y4B4 1467 aa38.57■■■■□ 3.76
H2AFB3-201ENST00000615853 CUX1P39880 1505 aa38.53■■■■□ 3.76
H2AFB3-201ENST00000615853 FGD5Q6ZNL6 1462 aa38.51■■■■□ 3.76
H2AFB3-201ENST00000615853 TDRD9Q8NDG6 1382 aaKnown RBP38.45■■■■□ 3.75
H2AFB3-201ENST00000615853 WDR97A6NE52 1622 aa38.35■■■■□ 3.73
H2AFB3-201ENST00000615853 RIMBP3CA6NJZ7 1639 aa38.33■■■■□ 3.73
H2AFB3-201ENST00000615853 RIMBP3BA6NNM3 1639 aa38.33■■■■□ 3.73
H2AFB3-201ENST00000615853 RIMBP3Q9UFD9 1639 aa38.33■■■■□ 3.73
H2AFB3-201ENST00000615853 FBLN2P98095 1184 aa38.31■■■■□ 3.72
H2AFB3-201ENST00000615853 CHD1O14646 1710 aa38.29■■■■□ 3.72
H2AFB3-201ENST00000615853 ARHGEF11O15085 1522 aa38.27■■■■□ 3.72
H2AFB3-201ENST00000615853 SNAPC4Q5SXM2 1469 aa38.23■■■■□ 3.71
H2AFB3-201ENST00000615853 GRIN2BQ13224 1484 aa38.2■■■■□ 3.71
H2AFB3-201ENST00000615853 MAGI1Q96QZ7 1491 aaPredicted RBP38.16■■■■□ 3.7
H2AFB3-201ENST00000615853 ABCA10Q8WWZ4 1543 aa38.12■■■■□ 3.69
H2AFB3-201ENST00000615853 CHMP7Q8WUX9 453 aaPredicted RBP38.11■■■■□ 3.69
H2AFB3-201ENST00000615853 GAPVD1Q14C86 1478 aa38.09■■■■□ 3.69
H2AFB3-201ENST00000615853 SYNJ2O15056 1496 aa38.03■■■■□ 3.68
H2AFB3-201ENST00000615853 WRNQ14191 1432 aaPredicted RBP eCLIP38.03■■■■□ 3.68
H2AFB3-201ENST00000615853 CYB5RLQ6IPT4 315 aa38■■■■□ 3.67
H2AFB3-201ENST00000615853 ABCA5Q8WWZ7 1642 aa37.98■■■■□ 3.67
H2AFB3-201ENST00000615853 TOP2BQ02880 1626 aa37.97■■■■□ 3.67
H2AFB3-201ENST00000615853 CLASP1Q7Z460 1538 aa37.97■■■■□ 3.67
H2AFB3-201ENST00000615853 PBRM1Q86U86 1689 aa37.95■■■■□ 3.67
H2AFB3-201ENST00000615853 BIVM-ERCC5R4GMW8 1640 aa37.94■■■■□ 3.66
H2AFB3-201ENST00000615853 SYNJ1O43426 1573 aa37.94■■■■□ 3.66
H2AFB3-201ENST00000615853 ARAP1Q96P48 1450 aa37.92■■■■□ 3.66
H2AFB3-201ENST00000615853 GRIN2AQ12879 1464 aa37.69■■■■□ 3.62
H2AFB3-201ENST00000615853 ADAMTS12P58397 1594 aa37.68■■■■□ 3.62
H2AFB3-201ENST00000615853 FHAD1B1AJZ9 1412 aa37.64■■■■□ 3.62
H2AFB3-201ENST00000615853 ERICH3Q5RHP9 1530 aa37.62■■■■□ 3.61
H2AFB3-201ENST00000615853 NUP160Q12769 1436 aa37.58■■■■□ 3.61
H2AFB3-201ENST00000615853 CEP170Q5SW79 1584 aa37.51■■■■□ 3.6
H2AFB3-201ENST00000615853 TRHP20396 242 aaPredicted RBP37.46■■■■□ 3.59
H2AFB3-201ENST00000615853 ERCC6L2Q5T890 1561 aa37.38■■■■□ 3.57
H2AFB3-201ENST00000615853 SHROOM2Q13796 1616 aa37.32■■■■□ 3.57
H2AFB3-201ENST00000615853 KIF27Q86VH2 1401 aa37.27■■■■□ 3.56
H2AFB3-201ENST00000615853 IGF1RP08069 1367 aa37.27■■■■□ 3.56
H2AFB3-201ENST00000615853 JPH4Q96JJ6 628 aa37.22■■■■□ 3.55
H2AFB3-201ENST00000615853 PRG4Q92954 1404 aaPredicted RBP37.19■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms