Protein–RNA interactions for Protein: O60869

EDF1, Endothelial differentiation-related factor 1, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1O60869 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
EDF1O60869 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
EDF1O60869 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
EDF1O60869 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
EDF1O60869 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC22.12■■□□□ 1.13
EDF1O60869 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
EDF1O60869 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
EDF1O60869 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
EDF1O60869 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
EDF1O60869 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
EDF1O60869 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
EDF1O60869 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.11■■□□□ 1.13
EDF1O60869 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
EDF1O60869 TPT1-202ENST00000379055 948 ntTSL 2 BASIC22.11■■□□□ 1.13
EDF1O60869 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
EDF1O60869 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC22.11■■□□□ 1.13
EDF1O60869 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
EDF1O60869 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
EDF1O60869 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
EDF1O60869 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC22.1■■□□□ 1.13
EDF1O60869 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
EDF1O60869 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC22.1■■□□□ 1.13
EDF1O60869 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.1■■□□□ 1.13
EDF1O60869 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
EDF1O60869 AC080038.3-201ENST00000623346 1952 ntBASIC22.1■■□□□ 1.13
EDF1O60869 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
EDF1O60869 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
EDF1O60869 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
EDF1O60869 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
EDF1O60869 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
EDF1O60869 AC131274.2-201ENST00000580697 1507 ntBASIC22.09■■□□□ 1.13
EDF1O60869 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.09■■□□□ 1.13
EDF1O60869 SLC25A24-204ENST00000569674 2357 ntBASIC22.09■■□□□ 1.13
EDF1O60869 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
EDF1O60869 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
EDF1O60869 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
EDF1O60869 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
EDF1O60869 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC22.08■■□□□ 1.13
EDF1O60869 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
EDF1O60869 AL592295.1-201ENST00000400984 884 ntBASIC22.08■■□□□ 1.13
EDF1O60869 AC022413.1-201ENST00000624602 984 ntBASIC22.08■■□□□ 1.13
EDF1O60869 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
EDF1O60869 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
EDF1O60869 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
EDF1O60869 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC22.07■■□□□ 1.12
EDF1O60869 RPS2P7-201ENST00000447334 885 ntBASIC22.07■■□□□ 1.12
EDF1O60869 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC22.07■■□□□ 1.12
EDF1O60869 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC22.07■■□□□ 1.12
EDF1O60869 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
EDF1O60869 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
EDF1O60869 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
EDF1O60869 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
EDF1O60869 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
EDF1O60869 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
EDF1O60869 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
EDF1O60869 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
EDF1O60869 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC22.06■■□□□ 1.12
EDF1O60869 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
EDF1O60869 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
EDF1O60869 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC22.06■■□□□ 1.12
EDF1O60869 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
EDF1O60869 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
EDF1O60869 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
EDF1O60869 AC026310.3-201ENST00000625186 2373 ntBASIC22.05■■□□□ 1.12
EDF1O60869 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
EDF1O60869 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
EDF1O60869 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC22.05■■□□□ 1.12
EDF1O60869 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC22.05■■□□□ 1.12
EDF1O60869 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
EDF1O60869 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC22.05■■□□□ 1.12
EDF1O60869 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
EDF1O60869 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
EDF1O60869 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
EDF1O60869 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.04■■□□□ 1.12
EDF1O60869 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC22.04■■□□□ 1.12
EDF1O60869 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
EDF1O60869 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
EDF1O60869 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
EDF1O60869 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
EDF1O60869 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.04■■□□□ 1.12
EDF1O60869 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
EDF1O60869 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC22.03■■□□□ 1.12
EDF1O60869 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
EDF1O60869 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.03■■□□□ 1.12
EDF1O60869 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
EDF1O60869 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22.03■■□□□ 1.12
EDF1O60869 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
EDF1O60869 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC22.03■■□□□ 1.12
EDF1O60869 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC22.03■■□□□ 1.12
EDF1O60869 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
EDF1O60869 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC22.03■■□□□ 1.12
EDF1O60869 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
EDF1O60869 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
EDF1O60869 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
EDF1O60869 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC22.02■■□□□ 1.12
EDF1O60869 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
EDF1O60869 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC22.02■■□□□ 1.12
EDF1O60869 ABHD17AP4-201ENST00000411545 909 ntBASIC22.02■■□□□ 1.12
EDF1O60869 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
EDF1O60869 HES4-204ENST00000484667 667 ntTSL 3 BASIC22.02■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 479.1 ms