RNA–Protein interactions for RNA: ENST00000256367.2

TTC9-201, Transcript of tetratricopeptide repeat domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC9, Length 5,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9-201ENST00000256367 DCAF8L2P0C7V8 631 aa38.85■■■■□ 3.81
TTC9-201ENST00000256367 NISCHQ9Y2I1 1504 aa38.27■■■■□ 3.72
TTC9-201ENST00000256367 SUPT5HO00267 1087 aaKnown RBP36.85■■■■□ 3.49
TTC9-201ENST00000256367 SHROOM4Q9ULL8 1493 aa36.45■■■■□ 3.43
TTC9-201ENST00000256367 EHMT2Q96KQ7 1210 aa35.35■■■■□ 3.25
TTC9-201ENST00000256367 FAM9AQ8IZU1 332 aaPredicted RBP34.67■■■■□ 3.14
TTC9-201ENST00000256367 APLP2Q06481 763 aa34.67■■■■□ 3.14
TTC9-201ENST00000256367 TRIM41Q8WV44 630 aa34.21■■■■□ 3.07
TTC9-201ENST00000256367 TTBK1Q5TCY1 1321 aaPredicted RBP34.11■■■■□ 3.05
TTC9-201ENST00000256367 PCGF6Q9BYE7 350 aa34.03■■■■□ 3.04
TTC9-201ENST00000256367 RANGAP1P46060 587 aaPredicted RBP33.94■■■■□ 3.02
TTC9-201ENST00000256367 UBTFP17480 764 aaKnown RBP33.69■■■□□ 2.98
TTC9-201ENST00000256367 PELP1Q8IZL8 1130 aaKnown RBP33.62■■■□□ 2.97
TTC9-201ENST00000256367 ATP1B4Q9UN42 357 aaPredicted RBP33.58■■■□□ 2.97
TTC9-201ENST00000256367 CCER1Q8TC90 406 aaPredicted RBP33.41■■■□□ 2.94
TTC9-201ENST00000256367 ZEB1P37275 1124 aaPredicted RBP33.39■■■□□ 2.94
TTC9-201ENST00000256367 PPARGC1BQ86YN6 1023 aaKnown RBP33.01■■■□□ 2.88
TTC9-201ENST00000256367 CHIC1Q5VXU3 224 aa32.94■■■□□ 2.86
TTC9-201ENST00000256367 CENPBP07199 599 aaPredicted RBP32.9■■■□□ 2.86
TTC9-201ENST00000256367 ABCC9O60706 1549 aa32.89■■■□□ 2.86
TTC9-201ENST00000256367 TRIM26Q12899 539 aaPredicted RBP32.8■■■□□ 2.84
TTC9-201ENST00000256367 LOC105371045A0A1W2PR82 267 aa32.77■■■□□ 2.84
TTC9-201ENST00000256367 PABPN1Q86U42 306 aaKnown RBP eCLIP32.62■■■□□ 2.81
TTC9-201ENST00000256367 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.51■■■□□ 2.79
TTC9-201ENST00000256367 HNRNPUL2Q1KMD3 747 aaKnown RBP32.51■■■□□ 2.79
TTC9-201ENST00000256367 ITGAEP38570 1179 aa32.48■■■□□ 2.79
TTC9-201ENST00000256367 YTHDC1Q96MU7 727 aaKnown RBP32.34■■■□□ 2.77
TTC9-201ENST00000256367 HRCP23327 699 aa32.23■■■□□ 2.75
TTC9-201ENST00000256367 MYT1LQ9UL68 1186 aa32.22■■■□□ 2.75
TTC9-201ENST00000256367 NEFLP07196 543 aa32.21■■■□□ 2.75
TTC9-201ENST00000256367 ERICH6Q7L0X2 663 aa32.12■■■□□ 2.73
TTC9-201ENST00000256367 MYT1Q01538 1121 aa31.91■■■□□ 2.7
TTC9-201ENST00000256367 POLR3GLQ9BT43 218 aa31.91■■■□□ 2.7
TTC9-201ENST00000256367 FAM50AQ14320 339 aaKnown RBP31.77■■■□□ 2.68
TTC9-201ENST00000256367 ZCCHC6Q5VYS8 1495 aaKnown RBP31.69■■■□□ 2.66
TTC9-201ENST00000256367 SCRIBQ14160 1630 aa31.58■■■□□ 2.65
TTC9-201ENST00000256367 CNGB1Q14028 1251 aaPredicted RBP31.55■■■□□ 2.64
TTC9-201ENST00000256367 TRIM52Q96A61 297 aa31.52■■■□□ 2.64
TTC9-201ENST00000256367 FBLN2P98095 1184 aa31.5■■■□□ 2.63
TTC9-201ENST00000256367 CSRNP3Q8WYN3 585 aa31.5■■■□□ 2.63
TTC9-201ENST00000256367 CCDC180Q9P1Z9 1646 aa31.41■■■□□ 2.62
TTC9-201ENST00000256367 DIEXFQ68CQ4 756 aaKnown RBP31.4■■■□□ 2.62
TTC9-201ENST00000256367 NEUROD1Q13562 356 aa31.35■■■□□ 2.61
TTC9-201ENST00000256367 SLC4A1APQ9BWU0 796 aaKnown RBP31.29■■■□□ 2.6
TTC9-201ENST00000256367 P3H3Q8IVL6 736 aa31.28■■■□□ 2.6
TTC9-201ENST00000256367 ARID3CA6NKF2 412 aa31.11■■■□□ 2.57
TTC9-201ENST00000256367 ZNF326Q5BKZ1 582 aaKnown RBP31.06■■■□□ 2.56
TTC9-201ENST00000256367 DAXXQ9UER7 740 aaPredicted RBP31.05■■■□□ 2.56
TTC9-201ENST00000256367 CDK11AQ9UQ88 783 aaPredicted RBP30.9■■■□□ 2.54
TTC9-201ENST00000256367 ANP32CO43423 234 aa30.87■■■□□ 2.53
TTC9-201ENST00000256367 ZNF777Q9ULD5 760 aaPredicted RBP30.86■■■□□ 2.53
TTC9-201ENST00000256367 RB1CC1Q8TDY2 1594 aa30.86■■■□□ 2.53
TTC9-201ENST00000256367 ZNF316A6NFI3 1004 aaPredicted RBP30.85■■■□□ 2.53
TTC9-201ENST00000256367 DCAF1Q9Y4B6 1507 aa30.65■■■□□ 2.5
TTC9-201ENST00000256367 CLSPNQ9HAW4 1339 aa30.65■■■□□ 2.5
TTC9-201ENST00000256367 RSF1Q96T23 1441 aaPredicted RBP30.64■■■□□ 2.5
TTC9-201ENST00000256367 NACADO15069 1562 aa30.6■■■□□ 2.49
TTC9-201ENST00000256367 BCANQ96GW7 911 aa30.48■■■□□ 2.47
TTC9-201ENST00000256367 GTF3C3Q9Y5Q9 886 aa30.47■■■□□ 2.47
TTC9-201ENST00000256367 TONSLQ96HA7 1378 aa30.43■■■□□ 2.46
TTC9-201ENST00000256367 NPM1P06748 294 aaKnown RBP eCLIP30.4■■■□□ 2.46
TTC9-201ENST00000256367 CLIP1P30622 1438 aa30.38■■■□□ 2.45
TTC9-201ENST00000256367 CHMP7Q8WUX9 453 aaPredicted RBP30.36■■■□□ 2.45
TTC9-201ENST00000256367 CHIC2Q9UKJ5 165 aa30.35■■■□□ 2.45
TTC9-201ENST00000256367 BAZ1BQ9UIG0 1483 aaKnown RBP30.33■■■□□ 2.45
TTC9-201ENST00000256367 MTUS2Q5JR59 1369 aa30.31■■■□□ 2.44
TTC9-201ENST00000256367 EEA1Q15075 1411 aa30.3■■■□□ 2.44
TTC9-201ENST00000256367 ESF1Q9H501 851 aaKnown RBP30.28■■■□□ 2.44
TTC9-201ENST00000256367 WRNQ14191 1432 aaPredicted RBP eCLIP30.27■■■□□ 2.44
TTC9-201ENST00000256367 NEFMP07197 916 aa30.24■■■□□ 2.43
TTC9-201ENST00000256367 RTL5Q5HYW3 569 aaPredicted RBP30.24■■■□□ 2.43
TTC9-201ENST00000256367 CHGAP10645 457 aaKnown RBP30.24■■■□□ 2.43
TTC9-201ENST00000256367 GOLGA3Q08378 1498 aa30.21■■■□□ 2.43
TTC9-201ENST00000256367 CANXP27824 592 aaKnown RBP30.19■■■□□ 2.42
TTC9-201ENST00000256367 TSPY4P0CV99 314 aa30.19■■■□□ 2.42
TTC9-201ENST00000256367 TSPY10P0CW01 314 aa30.19■■■□□ 2.42
TTC9-201ENST00000256367 ZBTB47Q9UFB7 747 aaPredicted RBP30.17■■■□□ 2.42
TTC9-201ENST00000256367 MYO15BQ96JP2 1530 aa30.16■■■□□ 2.42
TTC9-201ENST00000256367 ACIN1Q9UKV3 1341 aaKnown RBP30.15■■■□□ 2.42
TTC9-201ENST00000256367 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.15■■■□□ 2.42
TTC9-201ENST00000256367 STAG3Q9UJ98 1225 aa30.14■■■□□ 2.42
TTC9-201ENST00000256367 CEP162Q5TB80 1403 aa30.13■■■□□ 2.41
TTC9-201ENST00000256367 SLC24A1O60721 1099 aa30.11■■■□□ 2.41
TTC9-201ENST00000256367 BAZ1AQ9NRL2 1556 aaPredicted RBP30.11■■■□□ 2.41
TTC9-201ENST00000256367 DDX10Q13206 875 aaKnown RBP30.09■■■□□ 2.41
TTC9-201ENST00000256367 KIF27Q86VH2 1401 aa30.06■■■□□ 2.4
TTC9-201ENST00000256367 CECR2Q9BXF3 1484 aa30.04■■■□□ 2.4
TTC9-201ENST00000256367 TNIKQ9UKE5 1360 aa29.95■■■□□ 2.39
TTC9-201ENST00000256367 CEP164Q9UPV0 1460 aa29.94■■■□□ 2.38
TTC9-201ENST00000256367 RRP7BPQ9NSQ0 103 aa29.94■■■□□ 2.38
TTC9-201ENST00000256367 PLEKHD1A6NEE1 506 aa29.92■■■□□ 2.38
TTC9-201ENST00000256367 PLPPR3Q6T4P5 718 aa29.92■■■□□ 2.38
TTC9-201ENST00000256367 KDM2AQ9Y2K7 1162 aa29.91■■■□□ 2.38
TTC9-201ENST00000256367 HNRNPUQ00839 825 aaKnown RBP eCLIP29.91■■■□□ 2.38
TTC9-201ENST00000256367 BCL11AQ9H165 835 aa29.91■■■□□ 2.38
TTC9-201ENST00000256367 FAM9BQ8IZU0 186 aa29.89■■■□□ 2.38
TTC9-201ENST00000256367 KCNH8Q96L42 1107 aa29.87■■■□□ 2.37
TTC9-201ENST00000256367 TMC1Q8TDI8 760 aa29.78■■■□□ 2.36
TTC9-201ENST00000256367 FKBP8Q14318 412 aa29.77■■■□□ 2.36
TTC9-201ENST00000256367 HIRIP3Q9BW71 556 aaPredicted RBP29.71■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms