RNA–Protein interactions for RNA: ENST00000359926.7

PHACTR3-202, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 2 BASIC

Gene PHACTR3, Length 2,252 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-202ENST00000359926 NISCHQ9Y2I1 1504 aa46.3■■■■■ 5
PHACTR3-202ENST00000359926 CCDC180Q9P1Z9 1646 aa39.7■■■■□ 3.95
PHACTR3-202ENST00000359926 ZCCHC6Q5VYS8 1495 aaKnown RBP39.04■■■■□ 3.84
PHACTR3-202ENST00000359926 SHROOM4Q9ULL8 1493 aa38.89■■■■□ 3.82
PHACTR3-202ENST00000359926 DCAF8L2P0C7V8 631 aa38.5■■■■□ 3.75
PHACTR3-202ENST00000359926 DCAF1Q9Y4B6 1507 aa38.02■■■■□ 3.68
PHACTR3-202ENST00000359926 SUPT5HO00267 1087 aaKnown RBP37.8■■■■□ 3.64
PHACTR3-202ENST00000359926 ABCC9O60706 1549 aa37.33■■■■□ 3.57
PHACTR3-202ENST00000359926 MYO15BQ96JP2 1530 aa37.19■■■■□ 3.54
PHACTR3-202ENST00000359926 SCRIBQ14160 1630 aa37.06■■■■□ 3.52
PHACTR3-202ENST00000359926 NACADO15069 1562 aa36.86■■■■□ 3.49
PHACTR3-202ENST00000359926 CHIC1Q5VXU3 224 aa36.45■■■■□ 3.42
PHACTR3-202ENST00000359926 RB1CC1Q8TDY2 1594 aa36.4■■■■□ 3.42
PHACTR3-202ENST00000359926 RSF1Q96T23 1441 aaPredicted RBP36.36■■■■□ 3.41
PHACTR3-202ENST00000359926 CECR2Q9BXF3 1484 aa36.15■■■■□ 3.38
PHACTR3-202ENST00000359926 MROH2BQ7Z745 1585 aa35.95■■■■□ 3.35
PHACTR3-202ENST00000359926 UNC13AQ9UPW8 1703 aa35.83■■■■□ 3.33
PHACTR3-202ENST00000359926 WIZO95785 1651 aa35.71■■■■□ 3.31
PHACTR3-202ENST00000359926 BAZ1AQ9NRL2 1556 aaPredicted RBP35.61■■■■□ 3.29
PHACTR3-202ENST00000359926 PABPN1Q86U42 306 aaKnown RBP eCLIP35.55■■■■□ 3.28
PHACTR3-202ENST00000359926 BICRAQ9NZM4 1560 aa35.46■■■■□ 3.27
PHACTR3-202ENST00000359926 SMARCA4P51532 1647 aa35.4■■■■□ 3.26
PHACTR3-202ENST00000359926 LOC105371045A0A1W2PR82 267 aa35.32■■■■□ 3.24
PHACTR3-202ENST00000359926 TRIM41Q8WV44 630 aa35.27■■■■□ 3.24
PHACTR3-202ENST00000359926 TOP2AP11388 1531 aaKnown RBP35.16■■■■□ 3.22
PHACTR3-202ENST00000359926 CCDC88BA6NC98 1476 aa34.99■■■■□ 3.19
PHACTR3-202ENST00000359926 EIF4G1Q04637 1599 aaKnown RBP34.95■■■■□ 3.19
PHACTR3-202ENST00000359926 FAM9AQ8IZU1 332 aaPredicted RBP34.94■■■■□ 3.18
PHACTR3-202ENST00000359926 SMARCA2P51531 1590 aa34.94■■■■□ 3.18
PHACTR3-202ENST00000359926 PEG3Q9GZU2 1588 aa34.78■■■■□ 3.16
PHACTR3-202ENST00000359926 ATAD2BQ9ULI0 1458 aa34.67■■■■□ 3.14
PHACTR3-202ENST00000359926 ABCC8Q09428 1581 aa34.66■■■■□ 3.14
PHACTR3-202ENST00000359926 EHMT2Q96KQ7 1210 aa34.65■■■■□ 3.14
PHACTR3-202ENST00000359926 PCGF6Q9BYE7 350 aa34.55■■■■□ 3.12
PHACTR3-202ENST00000359926 BAZ1BQ9UIG0 1483 aaKnown RBP34.52■■■■□ 3.12
PHACTR3-202ENST00000359926 SOGA1O94964 1423 aa34.2■■■■□ 3.07
PHACTR3-202ENST00000359926 WRNQ14191 1432 aaPredicted RBP eCLIP34.17■■■■□ 3.06
PHACTR3-202ENST00000359926 NCAPD3P42695 1498 aa34.12■■■■□ 3.05
PHACTR3-202ENST00000359926 TRIM26Q12899 539 aaPredicted RBP34.07■■■■□ 3.05
PHACTR3-202ENST00000359926 RUSC2Q8N2Y8 1516 aa34.07■■■■□ 3.04
PHACTR3-202ENST00000359926 HMGXB3Q12766 1538 aa34.06■■■■□ 3.04
PHACTR3-202ENST00000359926 HRCP23327 699 aa34.06■■■■□ 3.04
PHACTR3-202ENST00000359926 SYNJ1O43426 1573 aa34.04■■■■□ 3.04
PHACTR3-202ENST00000359926 CSRNP3Q8WYN3 585 aa33.92■■■■□ 3.02
PHACTR3-202ENST00000359926 EEA1Q15075 1411 aa33.89■■■■□ 3.02
PHACTR3-202ENST00000359926 PPARGC1BQ86YN6 1023 aaKnown RBP33.75■■■□□ 2.99
PHACTR3-202ENST00000359926 UBTFP17480 764 aaKnown RBP33.7■■■□□ 2.99
PHACTR3-202ENST00000359926 TNIKQ9UKE5 1360 aa33.7■■■□□ 2.98
PHACTR3-202ENST00000359926 CEP162Q5TB80 1403 aa33.69■■■□□ 2.98
PHACTR3-202ENST00000359926 TOP2BQ02880 1626 aa33.68■■■□□ 2.98
PHACTR3-202ENST00000359926 CFTRP13569 1480 aa33.65■■■□□ 2.98
PHACTR3-202ENST00000359926 CC2D2AQ9P2K1 1620 aa33.63■■■□□ 2.97
PHACTR3-202ENST00000359926 GOLGA3Q08378 1498 aa33.63■■■□□ 2.97
PHACTR3-202ENST00000359926 BIVM-ERCC5R4GMW8 1640 aa33.57■■■□□ 2.96
PHACTR3-202ENST00000359926 CUX1P39880 1505 aa33.52■■■□□ 2.96
PHACTR3-202ENST00000359926 CEP164Q9UPV0 1460 aa33.52■■■□□ 2.96
PHACTR3-202ENST00000359926 KIF21BO75037 1637 aa33.47■■■□□ 2.95
PHACTR3-202ENST00000359926 CADPSQ9ULU8 1353 aa33.41■■■□□ 2.94
PHACTR3-202ENST00000359926 RAPGEF2Q9Y4G8 1499 aa33.4■■■□□ 2.94
PHACTR3-202ENST00000359926 TTBK1Q5TCY1 1321 aaPredicted RBP33.34■■■□□ 2.93
PHACTR3-202ENST00000359926 PRDM2Q13029 1718 aa33.3■■■□□ 2.92
PHACTR3-202ENST00000359926 CLIP1P30622 1438 aa33.22■■■□□ 2.91
PHACTR3-202ENST00000359926 RANGAP1P46060 587 aaPredicted RBP33.2■■■□□ 2.91
PHACTR3-202ENST00000359926 KIF27Q86VH2 1401 aa33.17■■■□□ 2.9
PHACTR3-202ENST00000359926 PRXQ9BXM0 1461 aa33.17■■■□□ 2.9
PHACTR3-202ENST00000359926 FANCD2Q9BXW9 1451 aa33.08■■■□□ 2.89
PHACTR3-202ENST00000359926 NESP48681 1621 aa33.07■■■□□ 2.88
PHACTR3-202ENST00000359926 ERICH3Q5RHP9 1530 aa33.07■■■□□ 2.88
PHACTR3-202ENST00000359926 FGD5Q6ZNL6 1462 aa33.02■■■□□ 2.88
PHACTR3-202ENST00000359926 CUX2O14529 1486 aa33.01■■■□□ 2.87
PHACTR3-202ENST00000359926 DNAJC5BQ9UF47 199 aa33■■■□□ 2.87
PHACTR3-202ENST00000359926 VPS8Q8N3P4 1428 aa32.99■■■□□ 2.87
PHACTR3-202ENST00000359926 ZEB1P37275 1124 aaPredicted RBP32.96■■■□□ 2.87
PHACTR3-202ENST00000359926 IGF1RP08069 1367 aa32.9■■■□□ 2.86
PHACTR3-202ENST00000359926 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.88■■■□□ 2.85
PHACTR3-202ENST00000359926 DNMBPQ6XZF7 1577 aa32.81■■■□□ 2.84
PHACTR3-202ENST00000359926 TOPBP1Q92547 1522 aa32.79■■■□□ 2.84
PHACTR3-202ENST00000359926 ARAP1Q96P48 1450 aa32.79■■■□□ 2.84
PHACTR3-202ENST00000359926 RAD54L2Q9Y4B4 1467 aa32.78■■■□□ 2.84
PHACTR3-202ENST00000359926 LAMC3Q9Y6N6 1575 aa32.77■■■□□ 2.84
PHACTR3-202ENST00000359926 APLP2Q06481 763 aa32.76■■■□□ 2.83
PHACTR3-202ENST00000359926 POLA1P09884 1462 aaPredicted RBP32.74■■■□□ 2.83
PHACTR3-202ENST00000359926 CARMIL1Q5VZK9 1371 aa32.73■■■□□ 2.83
PHACTR3-202ENST00000359926 CCER1Q8TC90 406 aaPredicted RBP32.71■■■□□ 2.83
PHACTR3-202ENST00000359926 URB2Q14146 1524 aaKnown RBP32.65■■■□□ 2.82
PHACTR3-202ENST00000359926 ARHGAP35Q9NRY4 1499 aa32.63■■■□□ 2.81
PHACTR3-202ENST00000359926 ABCA10Q8WWZ4 1543 aa32.63■■■□□ 2.81
PHACTR3-202ENST00000359926 PDS5BQ9NTI5 1447 aa32.57■■■□□ 2.81
PHACTR3-202ENST00000359926 HNRNPUL2Q1KMD3 747 aaKnown RBP32.52■■■□□ 2.8
PHACTR3-202ENST00000359926 KANK4Q5T7N3 995 aaPredicted RBP32.51■■■□□ 2.8
PHACTR3-202ENST00000359926 KIF21AQ7Z4S6 1674 aa32.48■■■□□ 2.79
PHACTR3-202ENST00000359926 TDRD9Q8NDG6 1382 aaKnown RBP32.42■■■□□ 2.78
PHACTR3-202ENST00000359926 WDR97A6NE52 1622 aa32.39■■■□□ 2.78
PHACTR3-202ENST00000359926 P3H3Q8IVL6 736 aa32.33■■■□□ 2.77
PHACTR3-202ENST00000359926 CUL7Q14999 1698 aa32.31■■■□□ 2.76
PHACTR3-202ENST00000359926 ABCA5Q8WWZ7 1642 aa32.28■■■□□ 2.76
PHACTR3-202ENST00000359926 GAPVD1Q14C86 1478 aa32.27■■■□□ 2.76
PHACTR3-202ENST00000359926 TARBP1Q13395 1621 aaKnown RBP32.18■■■□□ 2.74
PHACTR3-202ENST00000359926 FHOD3Q2V2M9 1422 aa32.18■■■□□ 2.74
PHACTR3-202ENST00000359926 CTTNBP2Q8WZ74 1663 aa32.13■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms