RNA–Protein interactions for RNA: ENST00000619559.4

LCK-214, Transcript of LCK proto-oncogene, Src family tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCK, Length 2,099 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCK-214ENST00000619559 NISCHQ9Y2I1 1504 aa45.47■■■■■ 4.87
LCK-214ENST00000619559 CCDC180Q9P1Z9 1646 aa39.13■■■■□ 3.86
LCK-214ENST00000619559 ZCCHC6Q5VYS8 1495 aaKnown RBP38.42■■■■□ 3.74
LCK-214ENST00000619559 SHROOM4Q9ULL8 1493 aa38■■■■□ 3.67
LCK-214ENST00000619559 DCAF1Q9Y4B6 1507 aa37.53■■■■□ 3.6
LCK-214ENST00000619559 DCAF8L2P0C7V8 631 aa37.27■■■■□ 3.56
LCK-214ENST00000619559 SUPT5HO00267 1087 aaKnown RBP37.07■■■■□ 3.52
LCK-214ENST00000619559 MYO15BQ96JP2 1530 aa36.64■■■■□ 3.46
LCK-214ENST00000619559 SCRIBQ14160 1630 aa36.24■■■■□ 3.39
LCK-214ENST00000619559 ABCC9O60706 1549 aa36.21■■■■□ 3.39
LCK-214ENST00000619559 NACADO15069 1562 aa36.15■■■■□ 3.38
LCK-214ENST00000619559 CHIC1Q5VXU3 224 aa36.04■■■■□ 3.36
LCK-214ENST00000619559 RSF1Q96T23 1441 aaPredicted RBP35.71■■■■□ 3.31
LCK-214ENST00000619559 RB1CC1Q8TDY2 1594 aa35.61■■■■□ 3.29
LCK-214ENST00000619559 CECR2Q9BXF3 1484 aa35.3■■■■□ 3.24
LCK-214ENST00000619559 MROH2BQ7Z745 1585 aa35.22■■■■□ 3.23
LCK-214ENST00000619559 UNC13AQ9UPW8 1703 aa35.09■■■■□ 3.21
LCK-214ENST00000619559 WIZO95785 1651 aa35.05■■■■□ 3.2
LCK-214ENST00000619559 BAZ1AQ9NRL2 1556 aaPredicted RBP35.01■■■■□ 3.19
LCK-214ENST00000619559 SMARCA4P51532 1647 aa34.76■■■■□ 3.16
LCK-214ENST00000619559 LOC105371045A0A1W2PR82 267 aa34.75■■■■□ 3.15
LCK-214ENST00000619559 TRIM41Q8WV44 630 aa34.72■■■■□ 3.15
LCK-214ENST00000619559 TOP2AP11388 1531 aaKnown RBP34.63■■■■□ 3.13
LCK-214ENST00000619559 BICRAQ9NZM4 1560 aa34.58■■■■□ 3.13
LCK-214ENST00000619559 EIF4G1Q04637 1599 aaKnown RBP34.56■■■■□ 3.12
LCK-214ENST00000619559 SMARCA2P51531 1590 aa34.37■■■■□ 3.09
LCK-214ENST00000619559 PCGF6Q9BYE7 350 aa34.33■■■■□ 3.09
LCK-214ENST00000619559 CCDC88BA6NC98 1476 aa34.32■■■■□ 3.08
LCK-214ENST00000619559 PABPN1Q86U42 306 aaKnown RBP eCLIP34.26■■■■□ 3.08
LCK-214ENST00000619559 HRCP23327 699 aa34.24■■■■□ 3.07
LCK-214ENST00000619559 PEG3Q9GZU2 1588 aa34.23■■■■□ 3.07
LCK-214ENST00000619559 FAM9AQ8IZU1 332 aaPredicted RBP34.2■■■■□ 3.07
LCK-214ENST00000619559 ABCC8Q09428 1581 aa34.01■■■■□ 3.03
LCK-214ENST00000619559 TRIM26Q12899 539 aaPredicted RBP34■■■■□ 3.03
LCK-214ENST00000619559 ATAD2BQ9ULI0 1458 aa33.88■■■■□ 3.01
LCK-214ENST00000619559 BAZ1BQ9UIG0 1483 aaKnown RBP33.76■■■□□ 2.99
LCK-214ENST00000619559 EHMT2Q96KQ7 1210 aa33.73■■■□□ 2.99
LCK-214ENST00000619559 EEA1Q15075 1411 aa33.64■■■□□ 2.98
LCK-214ENST00000619559 WRNQ14191 1432 aaPredicted RBP eCLIP33.57■■■□□ 2.97
LCK-214ENST00000619559 SOGA1O94964 1423 aa33.56■■■□□ 2.96
LCK-214ENST00000619559 SYNJ1O43426 1573 aa33.46■■■□□ 2.95
LCK-214ENST00000619559 HMGXB3Q12766 1538 aa33.42■■■□□ 2.94
LCK-214ENST00000619559 RUSC2Q8N2Y8 1516 aa33.41■■■□□ 2.94
LCK-214ENST00000619559 CSRNP3Q8WYN3 585 aa33.38■■■□□ 2.93
LCK-214ENST00000619559 TNIKQ9UKE5 1360 aa33.37■■■□□ 2.93
LCK-214ENST00000619559 NCAPD3P42695 1498 aa33.35■■■□□ 2.93
LCK-214ENST00000619559 PPARGC1BQ86YN6 1023 aaKnown RBP33.33■■■□□ 2.93
LCK-214ENST00000619559 CEP162Q5TB80 1403 aa33.31■■■□□ 2.92
LCK-214ENST00000619559 GOLGA3Q08378 1498 aa33.28■■■□□ 2.92
LCK-214ENST00000619559 KIF21BO75037 1637 aa33.21■■■□□ 2.91
LCK-214ENST00000619559 ZEB1P37275 1124 aaPredicted RBP33.2■■■□□ 2.91
LCK-214ENST00000619559 TOP2BQ02880 1626 aa33.2■■■□□ 2.91
LCK-214ENST00000619559 BIVM-ERCC5R4GMW8 1640 aa33.16■■■□□ 2.9
LCK-214ENST00000619559 CEP164Q9UPV0 1460 aa33.15■■■□□ 2.9
LCK-214ENST00000619559 UBTFP17480 764 aaKnown RBP33.09■■■□□ 2.89
LCK-214ENST00000619559 PRDM2Q13029 1718 aa32.95■■■□□ 2.87
LCK-214ENST00000619559 CFTRP13569 1480 aa32.94■■■□□ 2.86
LCK-214ENST00000619559 CUX1P39880 1505 aa32.86■■■□□ 2.85
LCK-214ENST00000619559 RAPGEF2Q9Y4G8 1499 aa32.82■■■□□ 2.84
LCK-214ENST00000619559 CLIP1P30622 1438 aa32.79■■■□□ 2.84
LCK-214ENST00000619559 ERICH3Q5RHP9 1530 aa32.75■■■□□ 2.83
LCK-214ENST00000619559 PRXQ9BXM0 1461 aa32.68■■■□□ 2.82
LCK-214ENST00000619559 CC2D2AQ9P2K1 1620 aa32.68■■■□□ 2.82
LCK-214ENST00000619559 VPS8Q8N3P4 1428 aa32.65■■■□□ 2.82
LCK-214ENST00000619559 KIF27Q86VH2 1401 aa32.61■■■□□ 2.81
LCK-214ENST00000619559 CADPSQ9ULU8 1353 aa32.6■■■□□ 2.81
LCK-214ENST00000619559 TTBK1Q5TCY1 1321 aaPredicted RBP32.59■■■□□ 2.81
LCK-214ENST00000619559 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.52■■■□□ 2.8
LCK-214ENST00000619559 CCER1Q8TC90 406 aaPredicted RBP32.5■■■□□ 2.79
LCK-214ENST00000619559 ARAP1Q96P48 1450 aa32.36■■■□□ 2.77
LCK-214ENST00000619559 APLP2Q06481 763 aa32.35■■■□□ 2.77
LCK-214ENST00000619559 CUX2O14529 1486 aa32.32■■■□□ 2.76
LCK-214ENST00000619559 FGD5Q6ZNL6 1462 aa32.31■■■□□ 2.76
LCK-214ENST00000619559 RANGAP1P46060 587 aaPredicted RBP32.29■■■□□ 2.76
LCK-214ENST00000619559 FANCD2Q9BXW9 1451 aa32.28■■■□□ 2.76
LCK-214ENST00000619559 IGF1RP08069 1367 aa32.21■■■□□ 2.75
LCK-214ENST00000619559 DNMBPQ6XZF7 1577 aa32.2■■■□□ 2.74
LCK-214ENST00000619559 ARHGAP35Q9NRY4 1499 aa32.13■■■□□ 2.73
LCK-214ENST00000619559 CARMIL1Q5VZK9 1371 aa32.08■■■□□ 2.73
LCK-214ENST00000619559 LAMC3Q9Y6N6 1575 aa32.07■■■□□ 2.72
LCK-214ENST00000619559 TOPBP1Q92547 1522 aa32.07■■■□□ 2.72
LCK-214ENST00000619559 NESP48681 1621 aa32.05■■■□□ 2.72
LCK-214ENST00000619559 HNRNPUL2Q1KMD3 747 aaKnown RBP32.04■■■□□ 2.72
LCK-214ENST00000619559 ABCA10Q8WWZ4 1543 aa32.03■■■□□ 2.72
LCK-214ENST00000619559 POLA1P09884 1462 aaPredicted RBP31.99■■■□□ 2.71
LCK-214ENST00000619559 RAD54L2Q9Y4B4 1467 aa31.93■■■□□ 2.7
LCK-214ENST00000619559 CUL7Q14999 1698 aa31.9■■■□□ 2.7
LCK-214ENST00000619559 KANK4Q5T7N3 995 aaPredicted RBP31.9■■■□□ 2.7
LCK-214ENST00000619559 WDR97A6NE52 1622 aa31.89■■■□□ 2.7
LCK-214ENST00000619559 MAP3K1Q13233 1512 aa31.86■■■□□ 2.69
LCK-214ENST00000619559 RRBP1Q9P2E9 1410 aaKnown RBP31.85■■■□□ 2.69
LCK-214ENST00000619559 URB2Q14146 1524 aaKnown RBP31.84■■■□□ 2.69
LCK-214ENST00000619559 TIAM1Q13009 1591 aa31.8■■■□□ 2.68
LCK-214ENST00000619559 CTTNBP2Q8WZ74 1663 aa31.77■■■□□ 2.68
LCK-214ENST00000619559 PDS5BQ9NTI5 1447 aa31.77■■■□□ 2.68
LCK-214ENST00000619559 FHAD1B1AJZ9 1412 aa31.72■■■□□ 2.67
LCK-214ENST00000619559 ABCA5Q8WWZ7 1642 aa31.71■■■□□ 2.67
LCK-214ENST00000619559 EFCAB5A4FU69 1503 aa31.71■■■□□ 2.67
LCK-214ENST00000619559 KIF21AQ7Z4S6 1674 aa31.71■■■□□ 2.67
LCK-214ENST00000619559 CFAP43Q8NDM7 1665 aa31.7■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms