RNA–Protein interactions for RNA: ENST00000587013.5

SPRED3-204, Transcript of sprouty related EVH1 domain containing 3, humanhuman

TSL 5 BASIC

Gene SPRED3, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED3-204ENST00000587013 NISCHQ9Y2I1 1504 aa52.15■■■■■ 5.94
SPRED3-204ENST00000587013 CCDC180Q9P1Z9 1646 aa45.97■■■■■ 4.95
SPRED3-204ENST00000587013 ABCC9O60706 1549 aa44.4■■■■■ 4.7
SPRED3-204ENST00000587013 ZCCHC6Q5VYS8 1495 aaKnown RBP43.63■■■■■ 4.57
SPRED3-204ENST00000587013 DCAF8L2P0C7V8 631 aa43.46■■■■■ 4.55
SPRED3-204ENST00000587013 DCAF1Q9Y4B6 1507 aa43.13■■■■■ 4.49
SPRED3-204ENST00000587013 NACADO15069 1562 aa43.02■■■■■ 4.48
SPRED3-204ENST00000587013 RB1CC1Q8TDY2 1594 aa42.92■■■■■ 4.46
SPRED3-204ENST00000587013 MYO15BQ96JP2 1530 aa42.91■■■■■ 4.46
SPRED3-204ENST00000587013 SCRIBQ14160 1630 aa42.19■■■■■ 4.34
SPRED3-204ENST00000587013 UNC13AQ9UPW8 1703 aa42.1■■■■■ 4.33
SPRED3-204ENST00000587013 SHROOM4Q9ULL8 1493 aa41.9■■■■■ 4.3
SPRED3-204ENST00000587013 PABPN1Q86U42 306 aaKnown RBP eCLIP41.66■■■■■ 4.26
SPRED3-204ENST00000587013 BICRAQ9NZM4 1560 aa41.65■■■■■ 4.26
SPRED3-204ENST00000587013 CECR2Q9BXF3 1484 aa40.63■■■■■ 4.09
SPRED3-204ENST00000587013 EIF4G1Q04637 1599 aaKnown RBP40.47■■■■■ 4.07
SPRED3-204ENST00000587013 BAZ1AQ9NRL2 1556 aaPredicted RBP40.34■■■■■ 4.05
SPRED3-204ENST00000587013 SMARCA4P51532 1647 aa40.33■■■■■ 4.05
SPRED3-204ENST00000587013 MROH2BQ7Z745 1585 aa40.27■■■■■ 4.04
SPRED3-204ENST00000587013 DNAJC5BQ9UF47 199 aa40.17■■■■■ 4.02
SPRED3-204ENST00000587013 CC2D2AQ9P2K1 1620 aa40.15■■■■■ 4.02
SPRED3-204ENST00000587013 RSF1Q96T23 1441 aaPredicted RBP40.07■■■■■ 4
SPRED3-204ENST00000587013 SUPT5HO00267 1087 aaKnown RBP40.05■■■■■ 4
SPRED3-204ENST00000587013 WIZO95785 1651 aa39.93■■■■□ 3.98
SPRED3-204ENST00000587013 ATAD2BQ9ULI0 1458 aa39.89■■■■□ 3.98
SPRED3-204ENST00000587013 SMARCA2P51531 1590 aa39.84■■■■□ 3.97
SPRED3-204ENST00000587013 PEG3Q9GZU2 1588 aa39.82■■■■□ 3.97
SPRED3-204ENST00000587013 NCAPD3P42695 1498 aa39.68■■■■□ 3.94
SPRED3-204ENST00000587013 BAZ1BQ9UIG0 1483 aaKnown RBP39.62■■■■□ 3.93
SPRED3-204ENST00000587013 HMGXB3Q12766 1538 aa39.56■■■■□ 3.92
SPRED3-204ENST00000587013 TOP2AP11388 1531 aaKnown RBP39.46■■■■□ 3.91
SPRED3-204ENST00000587013 CCDC88BA6NC98 1476 aa39.02■■■■□ 3.84
SPRED3-204ENST00000587013 NESP48681 1621 aa38.66■■■■□ 3.78
SPRED3-204ENST00000587013 CADPSQ9ULU8 1353 aa38.6■■■■□ 3.77
SPRED3-204ENST00000587013 LAMC3Q9Y6N6 1575 aa38.54■■■■□ 3.76
SPRED3-204ENST00000587013 CFTRP13569 1480 aa38.53■■■■□ 3.76
SPRED3-204ENST00000587013 PRDM2Q13029 1718 aa38.38■■■■□ 3.73
SPRED3-204ENST00000587013 PDS5BQ9NTI5 1447 aa38.24■■■■□ 3.71
SPRED3-204ENST00000587013 KIF21AQ7Z4S6 1674 aa38.24■■■■□ 3.71
SPRED3-204ENST00000587013 FANCD2Q9BXW9 1451 aa38.21■■■■□ 3.71
SPRED3-204ENST00000587013 ERCC6Q03468 1493 aa38.16■■■■□ 3.7
SPRED3-204ENST00000587013 CHIC1Q5VXU3 224 aa38.12■■■■□ 3.69
SPRED3-204ENST00000587013 CEP164Q9UPV0 1460 aa38.08■■■■□ 3.69
SPRED3-204ENST00000587013 ABCC8Q09428 1581 aa37.95■■■■□ 3.67
SPRED3-204ENST00000587013 MRC2Q9UBG0 1479 aa37.84■■■■□ 3.65
SPRED3-204ENST00000587013 THOC2Q8NI27 1593 aaKnown RBP37.83■■■■□ 3.65
SPRED3-204ENST00000587013 URB2Q14146 1524 aaKnown RBP37.8■■■■□ 3.64
SPRED3-204ENST00000587013 WRNQ14191 1432 aaPredicted RBP eCLIP37.8■■■■□ 3.64
SPRED3-204ENST00000587013 TRIM41Q8WV44 630 aa37.78■■■■□ 3.64
SPRED3-204ENST00000587013 CUX1P39880 1505 aa37.73■■■■□ 3.63
SPRED3-204ENST00000587013 DNMBPQ6XZF7 1577 aa37.69■■■■□ 3.62
SPRED3-204ENST00000587013 TOPBP1Q92547 1522 aa37.69■■■■□ 3.62
SPRED3-204ENST00000587013 BIVM-ERCC5R4GMW8 1640 aa37.69■■■■□ 3.62
SPRED3-204ENST00000587013 WDR62O43379 1518 aa37.68■■■■□ 3.62
SPRED3-204ENST00000587013 SYNJ1O43426 1573 aa37.68■■■■□ 3.62
SPRED3-204ENST00000587013 TOP2BQ02880 1626 aa37.65■■■■□ 3.62
SPRED3-204ENST00000587013 FGD5Q6ZNL6 1462 aa37.47■■■■□ 3.59
SPRED3-204ENST00000587013 CUX2O14529 1486 aa37.43■■■■□ 3.58
SPRED3-204ENST00000587013 POLA1P09884 1462 aaPredicted RBP37.42■■■■□ 3.58
SPRED3-204ENST00000587013 RAD54L2Q9Y4B4 1467 aa37.33■■■■□ 3.57
SPRED3-204ENST00000587013 SOGA1O94964 1423 aa37.28■■■■□ 3.56
SPRED3-204ENST00000587013 TARBP1Q13395 1621 aaKnown RBP37.21■■■■□ 3.55
SPRED3-204ENST00000587013 IFT140Q96RY7 1462 aa37.2■■■■□ 3.55
SPRED3-204ENST00000587013 EEA1Q15075 1411 aa37.14■■■■□ 3.54
SPRED3-204ENST00000587013 WDR97A6NE52 1622 aa37.12■■■■□ 3.53
SPRED3-204ENST00000587013 ZNF608Q9ULD9 1512 aaPredicted RBP37.08■■■■□ 3.53
SPRED3-204ENST00000587013 ABCA10Q8WWZ4 1543 aa37.08■■■■□ 3.53
SPRED3-204ENST00000587013 TDRD9Q8NDG6 1382 aaKnown RBP37.03■■■■□ 3.52
SPRED3-204ENST00000587013 AQRO60306 1485 aaKnown RBP eCLIP36.97■■■■□ 3.51
SPRED3-204ENST00000587013 EIF4G3O43432 1585 aaKnown RBP36.95■■■■□ 3.51
SPRED3-204ENST00000587013 FAM9AQ8IZU1 332 aaPredicted RBP36.95■■■■□ 3.5
SPRED3-204ENST00000587013 KIF27Q86VH2 1401 aa36.92■■■■□ 3.5
SPRED3-204ENST00000587013 RUSC2Q8N2Y8 1516 aa36.91■■■■□ 3.5
SPRED3-204ENST00000587013 ABCA5Q8WWZ7 1642 aa36.9■■■■□ 3.5
SPRED3-204ENST00000587013 GAPVD1Q14C86 1478 aa36.86■■■■□ 3.49
SPRED3-204ENST00000587013 PBRM1Q86U86 1689 aa36.8■■■■□ 3.48
SPRED3-204ENST00000587013 CSRNP3Q8WYN3 585 aa36.76■■■■□ 3.48
SPRED3-204ENST00000587013 GRIN2BQ13224 1484 aa36.71■■■■□ 3.47
SPRED3-204ENST00000587013 KIF21BO75037 1637 aa36.7■■■■□ 3.46
SPRED3-204ENST00000587013 ERICH3Q5RHP9 1530 aa36.63■■■■□ 3.46
SPRED3-204ENST00000587013 IGF1RP08069 1367 aa36.63■■■■□ 3.45
SPRED3-204ENST00000587013 SNAPC4Q5SXM2 1469 aa36.63■■■■□ 3.45
SPRED3-204ENST00000587013 CUL7Q14999 1698 aa36.57■■■■□ 3.45
SPRED3-204ENST00000587013 GOLGA3Q08378 1498 aa36.55■■■■□ 3.44
SPRED3-204ENST00000587013 LOC105371045A0A1W2PR82 267 aa36.52■■■■□ 3.44
SPRED3-204ENST00000587013 MAGI1Q96QZ7 1491 aaPredicted RBP36.51■■■■□ 3.44
SPRED3-204ENST00000587013 PRXQ9BXM0 1461 aa36.5■■■■□ 3.43
SPRED3-204ENST00000587013 ADAMTS12P58397 1594 aa36.49■■■■□ 3.43
SPRED3-204ENST00000587013 CARMIL1Q5VZK9 1371 aa36.45■■■■□ 3.42
SPRED3-204ENST00000587013 FBLN2P98095 1184 aa36.44■■■■□ 3.42
SPRED3-204ENST00000587013 FHAD1B1AJZ9 1412 aa36.42■■■■□ 3.42
SPRED3-204ENST00000587013 SYNJ2O15056 1496 aa36.39■■■■□ 3.42
SPRED3-204ENST00000587013 CHD1O14646 1710 aa36.39■■■■□ 3.42
SPRED3-204ENST00000587013 EHMT2Q96KQ7 1210 aa36.38■■■■□ 3.41
SPRED3-204ENST00000587013 RAPGEF2Q9Y4G8 1499 aa36.37■■■■□ 3.41
SPRED3-204ENST00000587013 CHMP7Q8WUX9 453 aaPredicted RBP36.37■■■■□ 3.41
SPRED3-204ENST00000587013 GRIN2AQ12879 1464 aa36.27■■■■□ 3.4
SPRED3-204ENST00000587013 TNIKQ9UKE5 1360 aa36.27■■■■□ 3.4
SPRED3-204ENST00000587013 UBTFP17480 764 aaKnown RBP36.24■■■■□ 3.39
SPRED3-204ENST00000587013 CTTNBP2Q8WZ74 1663 aa36.14■■■■□ 3.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms