RNA–Protein interactions for RNA: ENST00000622462.4

MADCAM1-210, Transcript of mucosal vascular addressin cell adhesion molecule 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MADCAM1, Length 1,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MADCAM1-210ENST00000622462 NISCHQ9Y2I1 1504 aa53.44■■■■■ 6.14
MADCAM1-210ENST00000622462 CCDC180Q9P1Z9 1646 aa46.98■■■■■ 5.11
MADCAM1-210ENST00000622462 ABCC9O60706 1549 aa45.04■■■■■ 4.8
MADCAM1-210ENST00000622462 ZCCHC6Q5VYS8 1495 aaKnown RBP44.73■■■■■ 4.75
MADCAM1-210ENST00000622462 DCAF8L2P0C7V8 631 aa44.32■■■■■ 4.69
MADCAM1-210ENST00000622462 DCAF1Q9Y4B6 1507 aa44.21■■■■■ 4.67
MADCAM1-210ENST00000622462 MYO15BQ96JP2 1530 aa43.98■■■■■ 4.63
MADCAM1-210ENST00000622462 NACADO15069 1562 aa43.93■■■■■ 4.62
MADCAM1-210ENST00000622462 RB1CC1Q8TDY2 1594 aa43.73■■■■■ 4.59
MADCAM1-210ENST00000622462 SCRIBQ14160 1630 aa43.04■■■■■ 4.48
MADCAM1-210ENST00000622462 SHROOM4Q9ULL8 1493 aa42.99■■■■■ 4.47
MADCAM1-210ENST00000622462 UNC13AQ9UPW8 1703 aa42.76■■■■■ 4.44
MADCAM1-210ENST00000622462 BICRAQ9NZM4 1560 aa42.38■■■■■ 4.38
MADCAM1-210ENST00000622462 PABPN1Q86U42 306 aaKnown RBP eCLIP42.3■■■■■ 4.36
MADCAM1-210ENST00000622462 CECR2Q9BXF3 1484 aa41.55■■■■■ 4.24
MADCAM1-210ENST00000622462 BAZ1AQ9NRL2 1556 aaPredicted RBP41.33■■■■■ 4.21
MADCAM1-210ENST00000622462 MROH2BQ7Z745 1585 aa41.23■■■■■ 4.19
MADCAM1-210ENST00000622462 SMARCA4P51532 1647 aa41.23■■■■■ 4.19
MADCAM1-210ENST00000622462 EIF4G1Q04637 1599 aaKnown RBP41.18■■■■■ 4.18
MADCAM1-210ENST00000622462 RSF1Q96T23 1441 aaPredicted RBP41.14■■■■■ 4.18
MADCAM1-210ENST00000622462 SUPT5HO00267 1087 aaKnown RBP40.99■■■■■ 4.15
MADCAM1-210ENST00000622462 WIZO95785 1651 aa40.85■■■■■ 4.13
MADCAM1-210ENST00000622462 PEG3Q9GZU2 1588 aa40.78■■■■■ 4.12
MADCAM1-210ENST00000622462 CC2D2AQ9P2K1 1620 aa40.76■■■■■ 4.12
MADCAM1-210ENST00000622462 ATAD2BQ9ULI0 1458 aa40.74■■■■■ 4.11
MADCAM1-210ENST00000622462 SMARCA2P51531 1590 aa40.73■■■■■ 4.11
MADCAM1-210ENST00000622462 NCAPD3P42695 1498 aa40.54■■■■■ 4.08
MADCAM1-210ENST00000622462 BAZ1BQ9UIG0 1483 aaKnown RBP40.48■■■■■ 4.07
MADCAM1-210ENST00000622462 TOP2AP11388 1531 aaKnown RBP40.45■■■■■ 4.07
MADCAM1-210ENST00000622462 HMGXB3Q12766 1538 aa40.42■■■■■ 4.06
MADCAM1-210ENST00000622462 DNAJC5BQ9UF47 199 aa40.38■■■■■ 4.05
MADCAM1-210ENST00000622462 CCDC88BA6NC98 1476 aa40■■■■□ 3.99
MADCAM1-210ENST00000622462 CADPSQ9ULU8 1353 aa39.44■■■■□ 3.9
MADCAM1-210ENST00000622462 CFTRP13569 1480 aa39.41■■■■□ 3.9
MADCAM1-210ENST00000622462 NESP48681 1621 aa39.29■■■■□ 3.88
MADCAM1-210ENST00000622462 LAMC3Q9Y6N6 1575 aa39.28■■■■□ 3.88
MADCAM1-210ENST00000622462 PRDM2Q13029 1718 aa39.18■■■■□ 3.86
MADCAM1-210ENST00000622462 PDS5BQ9NTI5 1447 aa39.01■■■■□ 3.84
MADCAM1-210ENST00000622462 FANCD2Q9BXW9 1451 aa39■■■■□ 3.83
MADCAM1-210ENST00000622462 ABCC8Q09428 1581 aa38.88■■■■□ 3.81
MADCAM1-210ENST00000622462 CHIC1Q5VXU3 224 aa38.86■■■■□ 3.81
MADCAM1-210ENST00000622462 CEP164Q9UPV0 1460 aa38.83■■■■□ 3.81
MADCAM1-210ENST00000622462 KIF21AQ7Z4S6 1674 aa38.83■■■■□ 3.81
MADCAM1-210ENST00000622462 WRNQ14191 1432 aaPredicted RBP eCLIP38.76■■■■□ 3.8
MADCAM1-210ENST00000622462 ERCC6Q03468 1493 aa38.72■■■■□ 3.79
MADCAM1-210ENST00000622462 TRIM41Q8WV44 630 aa38.63■■■■□ 3.77
MADCAM1-210ENST00000622462 SYNJ1O43426 1573 aa38.61■■■■□ 3.77
MADCAM1-210ENST00000622462 CUX1P39880 1505 aa38.61■■■■□ 3.77
MADCAM1-210ENST00000622462 MRC2Q9UBG0 1479 aa38.56■■■■□ 3.76
MADCAM1-210ENST00000622462 URB2Q14146 1524 aaKnown RBP38.54■■■■□ 3.76
MADCAM1-210ENST00000622462 TOP2BQ02880 1626 aa38.54■■■■□ 3.76
MADCAM1-210ENST00000622462 DNMBPQ6XZF7 1577 aa38.52■■■■□ 3.76
MADCAM1-210ENST00000622462 BIVM-ERCC5R4GMW8 1640 aa38.52■■■■□ 3.76
MADCAM1-210ENST00000622462 TOPBP1Q92547 1522 aa38.49■■■■□ 3.75
MADCAM1-210ENST00000622462 THOC2Q8NI27 1593 aaKnown RBP38.42■■■■□ 3.74
MADCAM1-210ENST00000622462 WDR62O43379 1518 aa38.38■■■■□ 3.73
MADCAM1-210ENST00000622462 FGD5Q6ZNL6 1462 aa38.31■■■■□ 3.72
MADCAM1-210ENST00000622462 POLA1P09884 1462 aaPredicted RBP38.23■■■■□ 3.71
MADCAM1-210ENST00000622462 SOGA1O94964 1423 aa38.11■■■■□ 3.69
MADCAM1-210ENST00000622462 RAD54L2Q9Y4B4 1467 aa38.09■■■■□ 3.69
MADCAM1-210ENST00000622462 CUX2O14529 1486 aa38.05■■■■□ 3.68
MADCAM1-210ENST00000622462 ABCA10Q8WWZ4 1543 aa37.97■■■■□ 3.67
MADCAM1-210ENST00000622462 TARBP1Q13395 1621 aaKnown RBP37.97■■■■□ 3.67
MADCAM1-210ENST00000622462 IFT140Q96RY7 1462 aa37.97■■■■□ 3.67
MADCAM1-210ENST00000622462 WDR97A6NE52 1622 aa37.91■■■■□ 3.66
MADCAM1-210ENST00000622462 RUSC2Q8N2Y8 1516 aa37.9■■■■□ 3.66
MADCAM1-210ENST00000622462 FAM9AQ8IZU1 332 aaPredicted RBP37.86■■■■□ 3.65
MADCAM1-210ENST00000622462 KIF27Q86VH2 1401 aa37.86■■■■□ 3.65
MADCAM1-210ENST00000622462 EEA1Q15075 1411 aa37.84■■■■□ 3.65
MADCAM1-210ENST00000622462 TDRD9Q8NDG6 1382 aaKnown RBP37.78■■■■□ 3.64
MADCAM1-210ENST00000622462 ZNF608Q9ULD9 1512 aaPredicted RBP37.74■■■■□ 3.63
MADCAM1-210ENST00000622462 ABCA5Q8WWZ7 1642 aa37.72■■■■□ 3.63
MADCAM1-210ENST00000622462 GAPVD1Q14C86 1478 aa37.68■■■■□ 3.62
MADCAM1-210ENST00000622462 AQRO60306 1485 aaKnown RBP eCLIP37.67■■■■□ 3.62
MADCAM1-210ENST00000622462 CSRNP3Q8WYN3 585 aa37.67■■■■□ 3.62
MADCAM1-210ENST00000622462 EIF4G3O43432 1585 aaKnown RBP37.61■■■■□ 3.61
MADCAM1-210ENST00000622462 IGF1RP08069 1367 aa37.58■■■■□ 3.61
MADCAM1-210ENST00000622462 ERICH3Q5RHP9 1530 aa37.52■■■■□ 3.6
MADCAM1-210ENST00000622462 PBRM1Q86U86 1689 aa37.52■■■■□ 3.6
MADCAM1-210ENST00000622462 GRIN2BQ13224 1484 aa37.52■■■■□ 3.6
MADCAM1-210ENST00000622462 PRXQ9BXM0 1461 aa37.4■■■■□ 3.58
MADCAM1-210ENST00000622462 CUL7Q14999 1698 aa37.39■■■■□ 3.58
MADCAM1-210ENST00000622462 CARMIL1Q5VZK9 1371 aa37.39■■■■□ 3.58
MADCAM1-210ENST00000622462 KIF21BO75037 1637 aa37.36■■■■□ 3.57
MADCAM1-210ENST00000622462 SNAPC4Q5SXM2 1469 aa37.34■■■■□ 3.57
MADCAM1-210ENST00000622462 EHMT2Q96KQ7 1210 aa37.33■■■■□ 3.57
MADCAM1-210ENST00000622462 LOC105371045A0A1W2PR82 267 aa37.32■■■■□ 3.56
MADCAM1-210ENST00000622462 ADAMTS12P58397 1594 aa37.29■■■■□ 3.56
MADCAM1-210ENST00000622462 MAGI1Q96QZ7 1491 aaPredicted RBP37.29■■■■□ 3.56
MADCAM1-210ENST00000622462 FHAD1B1AJZ9 1412 aa37.28■■■■□ 3.56
MADCAM1-210ENST00000622462 RAPGEF2Q9Y4G8 1499 aa37.28■■■■□ 3.56
MADCAM1-210ENST00000622462 GOLGA3Q08378 1498 aa37.26■■■■□ 3.55
MADCAM1-210ENST00000622462 SYNJ2O15056 1496 aa37.14■■■■□ 3.54
MADCAM1-210ENST00000622462 UBTFP17480 764 aaKnown RBP37.11■■■■□ 3.53
MADCAM1-210ENST00000622462 CHMP7Q8WUX9 453 aaPredicted RBP37.08■■■■□ 3.53
MADCAM1-210ENST00000622462 FBLN2P98095 1184 aa37.04■■■■□ 3.52
MADCAM1-210ENST00000622462 GRIN2AQ12879 1464 aa37.04■■■■□ 3.52
MADCAM1-210ENST00000622462 TNIKQ9UKE5 1360 aa36.99■■■■□ 3.51
MADCAM1-210ENST00000622462 CHD1O14646 1710 aa36.94■■■■□ 3.5
MADCAM1-210ENST00000622462 CTTNBP2Q8WZ74 1663 aa36.85■■■■□ 3.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms