RNA–Protein interactions for RNA: ENST00000356595.8

PTGER3-204, Transcript of prostaglandin E receptor 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTGER3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTGER3-204ENST00000356595 NISCHQ9Y2I1 1504 aa46.53■■■■■ 5.04
PTGER3-204ENST00000356595 CCDC180Q9P1Z9 1646 aa40.19■■■■■ 4.02
PTGER3-204ENST00000356595 ZCCHC6Q5VYS8 1495 aaKnown RBP39.28■■■■□ 3.88
PTGER3-204ENST00000356595 DCAF1Q9Y4B6 1507 aa38.51■■■■□ 3.76
PTGER3-204ENST00000356595 SHROOM4Q9ULL8 1493 aa38.5■■■■□ 3.75
PTGER3-204ENST00000356595 DCAF8L2P0C7V8 631 aa38.12■■■■□ 3.69
PTGER3-204ENST00000356595 MYO15BQ96JP2 1530 aa37.75■■■■□ 3.63
PTGER3-204ENST00000356595 SUPT5HO00267 1087 aaKnown RBP37.47■■■■□ 3.59
PTGER3-204ENST00000356595 NACADO15069 1562 aa37.24■■■■□ 3.55
PTGER3-204ENST00000356595 ABCC9O60706 1549 aa37.23■■■■□ 3.55
PTGER3-204ENST00000356595 SCRIBQ14160 1630 aa37.06■■■■□ 3.52
PTGER3-204ENST00000356595 RB1CC1Q8TDY2 1594 aa36.73■■■■□ 3.47
PTGER3-204ENST00000356595 RSF1Q96T23 1441 aaPredicted RBP36.42■■■■□ 3.42
PTGER3-204ENST00000356595 CHIC1Q5VXU3 224 aa36.32■■■■□ 3.4
PTGER3-204ENST00000356595 CECR2Q9BXF3 1484 aa36.06■■■■□ 3.36
PTGER3-204ENST00000356595 UNC13AQ9UPW8 1703 aa35.97■■■■□ 3.35
PTGER3-204ENST00000356595 MROH2BQ7Z745 1585 aa35.96■■■■□ 3.35
PTGER3-204ENST00000356595 BAZ1AQ9NRL2 1556 aaPredicted RBP35.89■■■■□ 3.34
PTGER3-204ENST00000356595 WIZO95785 1651 aa35.71■■■■□ 3.31
PTGER3-204ENST00000356595 SMARCA4P51532 1647 aa35.59■■■■□ 3.29
PTGER3-204ENST00000356595 BICRAQ9NZM4 1560 aa35.58■■■■□ 3.29
PTGER3-204ENST00000356595 TOP2AP11388 1531 aaKnown RBP35.39■■■■□ 3.26
PTGER3-204ENST00000356595 PABPN1Q86U42 306 aaKnown RBP eCLIP35.26■■■■□ 3.24
PTGER3-204ENST00000356595 TRIM41Q8WV44 630 aa35.2■■■■□ 3.22
PTGER3-204ENST00000356595 PEG3Q9GZU2 1588 aa35.15■■■■□ 3.22
PTGER3-204ENST00000356595 EIF4G1Q04637 1599 aaKnown RBP35.14■■■■□ 3.22
PTGER3-204ENST00000356595 SMARCA2P51531 1590 aa35.08■■■■□ 3.21
PTGER3-204ENST00000356595 CCDC88BA6NC98 1476 aa35.03■■■■□ 3.2
PTGER3-204ENST00000356595 LOC105371045A0A1W2PR82 267 aa34.92■■■■□ 3.18
PTGER3-204ENST00000356595 ATAD2BQ9ULI0 1458 aa34.8■■■■□ 3.16
PTGER3-204ENST00000356595 BAZ1BQ9UIG0 1483 aaKnown RBP34.67■■■■□ 3.14
PTGER3-204ENST00000356595 ABCC8Q09428 1581 aa34.55■■■■□ 3.12
PTGER3-204ENST00000356595 FAM9AQ8IZU1 332 aaPredicted RBP34.53■■■■□ 3.12
PTGER3-204ENST00000356595 HMGXB3Q12766 1538 aa34.41■■■■□ 3.1
PTGER3-204ENST00000356595 NCAPD3P42695 1498 aa34.37■■■■□ 3.09
PTGER3-204ENST00000356595 WRNQ14191 1432 aaPredicted RBP eCLIP34.27■■■■□ 3.08
PTGER3-204ENST00000356595 EEA1Q15075 1411 aa34.25■■■■□ 3.07
PTGER3-204ENST00000356595 PCGF6Q9BYE7 350 aa34.24■■■■□ 3.07
PTGER3-204ENST00000356595 SOGA1O94964 1423 aa34.08■■■■□ 3.05
PTGER3-204ENST00000356595 TRIM26Q12899 539 aaPredicted RBP34.07■■■■□ 3.04
PTGER3-204ENST00000356595 SYNJ1O43426 1573 aa34.07■■■■□ 3.04
PTGER3-204ENST00000356595 EHMT2Q96KQ7 1210 aa33.98■■■■□ 3.03
PTGER3-204ENST00000356595 HRCP23327 699 aa33.96■■■■□ 3.03
PTGER3-204ENST00000356595 CSRNP3Q8WYN3 585 aa33.93■■■■□ 3.02
PTGER3-204ENST00000356595 TOP2BQ02880 1626 aa33.89■■■■□ 3.02
PTGER3-204ENST00000356595 RUSC2Q8N2Y8 1516 aa33.88■■■■□ 3.01
PTGER3-204ENST00000356595 CFTRP13569 1480 aa33.85■■■■□ 3.01
PTGER3-204ENST00000356595 TNIKQ9UKE5 1360 aa33.84■■■■□ 3.01
PTGER3-204ENST00000356595 BIVM-ERCC5R4GMW8 1640 aa33.84■■■■□ 3.01
PTGER3-204ENST00000356595 GOLGA3Q08378 1498 aa33.8■■■■□ 3
PTGER3-204ENST00000356595 KIF21BO75037 1637 aa33.74■■■□□ 2.99
PTGER3-204ENST00000356595 CC2D2AQ9P2K1 1620 aa33.73■■■□□ 2.99
PTGER3-204ENST00000356595 CEP164Q9UPV0 1460 aa33.72■■■□□ 2.99
PTGER3-204ENST00000356595 CEP162Q5TB80 1403 aa33.71■■■□□ 2.99
PTGER3-204ENST00000356595 PRDM2Q13029 1718 aa33.7■■■□□ 2.99
PTGER3-204ENST00000356595 CUX1P39880 1505 aa33.57■■■□□ 2.97
PTGER3-204ENST00000356595 UBTFP17480 764 aaKnown RBP33.57■■■□□ 2.96
PTGER3-204ENST00000356595 CADPSQ9ULU8 1353 aa33.55■■■□□ 2.96
PTGER3-204ENST00000356595 ERICH3Q5RHP9 1530 aa33.38■■■□□ 2.93
PTGER3-204ENST00000356595 RAPGEF2Q9Y4G8 1499 aa33.36■■■□□ 2.93
PTGER3-204ENST00000356595 KIF27Q86VH2 1401 aa33.33■■■□□ 2.93
PTGER3-204ENST00000356595 PRXQ9BXM0 1461 aa33.32■■■□□ 2.92
PTGER3-204ENST00000356595 CLIP1P30622 1438 aa33.27■■■□□ 2.92
PTGER3-204ENST00000356595 DNAJC5BQ9UF47 199 aa33.22■■■□□ 2.91
PTGER3-204ENST00000356595 ZEB1P37275 1124 aaPredicted RBP33.19■■■□□ 2.9
PTGER3-204ENST00000356595 PPARGC1BQ86YN6 1023 aaKnown RBP33.19■■■□□ 2.9
PTGER3-204ENST00000356595 FANCD2Q9BXW9 1451 aa33.18■■■□□ 2.9
PTGER3-204ENST00000356595 VPS8Q8N3P4 1428 aa33.11■■■□□ 2.89
PTGER3-204ENST00000356595 FGD5Q6ZNL6 1462 aa33.09■■■□□ 2.89
PTGER3-204ENST00000356595 LAMC3Q9Y6N6 1575 aa33.07■■■□□ 2.88
PTGER3-204ENST00000356595 DNMBPQ6XZF7 1577 aa33.04■■■□□ 2.88
PTGER3-204ENST00000356595 CUX2O14529 1486 aa33.03■■■□□ 2.88
PTGER3-204ENST00000356595 NESP48681 1621 aa32.94■■■□□ 2.86
PTGER3-204ENST00000356595 IGF1RP08069 1367 aa32.93■■■□□ 2.86
PTGER3-204ENST00000356595 TOPBP1Q92547 1522 aa32.91■■■□□ 2.86
PTGER3-204ENST00000356595 ABCA10Q8WWZ4 1543 aa32.84■■■□□ 2.85
PTGER3-204ENST00000356595 POLA1P09884 1462 aaPredicted RBP32.82■■■□□ 2.84
PTGER3-204ENST00000356595 ARAP1Q96P48 1450 aa32.82■■■□□ 2.84
PTGER3-204ENST00000356595 APLP2Q06481 763 aa32.81■■■□□ 2.84
PTGER3-204ENST00000356595 PDS5BQ9NTI5 1447 aa32.8■■■□□ 2.84
PTGER3-204ENST00000356595 CARMIL1Q5VZK9 1371 aa32.78■■■□□ 2.84
PTGER3-204ENST00000356595 TTBK1Q5TCY1 1321 aaPredicted RBP32.77■■■□□ 2.84
PTGER3-204ENST00000356595 RANGAP1P46060 587 aaPredicted RBP32.72■■■□□ 2.83
PTGER3-204ENST00000356595 URB2Q14146 1524 aaKnown RBP32.7■■■□□ 2.83
PTGER3-204ENST00000356595 RAD54L2Q9Y4B4 1467 aa32.69■■■□□ 2.82
PTGER3-204ENST00000356595 ARHGAP35Q9NRY4 1499 aa32.67■■■□□ 2.82
PTGER3-204ENST00000356595 WDR97A6NE52 1622 aa32.64■■■□□ 2.82
PTGER3-204ENST00000356595 CUL7Q14999 1698 aa32.63■■■□□ 2.81
PTGER3-204ENST00000356595 CCER1Q8TC90 406 aaPredicted RBP32.57■■■□□ 2.8
PTGER3-204ENST00000356595 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.56■■■□□ 2.8
PTGER3-204ENST00000356595 KIF21AQ7Z4S6 1674 aa32.56■■■□□ 2.8
PTGER3-204ENST00000356595 ABCA5Q8WWZ7 1642 aa32.49■■■□□ 2.79
PTGER3-204ENST00000356595 MAP3K1Q13233 1512 aa32.41■■■□□ 2.78
PTGER3-204ENST00000356595 EFCAB5A4FU69 1503 aa32.38■■■□□ 2.77
PTGER3-204ENST00000356595 GAPVD1Q14C86 1478 aa32.38■■■□□ 2.77
PTGER3-204ENST00000356595 CTTNBP2Q8WZ74 1663 aa32.36■■■□□ 2.77
PTGER3-204ENST00000356595 FHAD1B1AJZ9 1412 aa32.36■■■□□ 2.77
PTGER3-204ENST00000356595 TARBP1Q13395 1621 aaKnown RBP32.34■■■□□ 2.77
PTGER3-204ENST00000356595 MRC2Q9UBG0 1479 aa32.32■■■□□ 2.76
PTGER3-204ENST00000356595 KANK4Q5T7N3 995 aaPredicted RBP32.31■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms