RNA–Protein interactions for RNA: ENST00000529687.5

FNTA-208, Transcript of farnesyltransferase, CAAX box, alpha, humanhuman

TSL 2 BASIC

Gene FNTA, Length 1,950 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNTA-208ENST00000529687 NISCHQ9Y2I1 1504 aa50.17■■■■■ 5.62
FNTA-208ENST00000529687 CCDC180Q9P1Z9 1646 aa43.75■■■■■ 4.59
FNTA-208ENST00000529687 ZCCHC6Q5VYS8 1495 aaKnown RBP42.13■■■■■ 4.34
FNTA-208ENST00000529687 DCAF8L2P0C7V8 631 aa41.56■■■■■ 4.24
FNTA-208ENST00000529687 ABCC9O60706 1549 aa41.49■■■■■ 4.23
FNTA-208ENST00000529687 DCAF1Q9Y4B6 1507 aa41.46■■■■■ 4.23
FNTA-208ENST00000529687 MYO15BQ96JP2 1530 aa40.99■■■■■ 4.15
FNTA-208ENST00000529687 SHROOM4Q9ULL8 1493 aa40.95■■■■■ 4.15
FNTA-208ENST00000529687 NACADO15069 1562 aa40.78■■■■■ 4.12
FNTA-208ENST00000529687 RB1CC1Q8TDY2 1594 aa40.47■■■■■ 4.07
FNTA-208ENST00000529687 SCRIBQ14160 1630 aa40.27■■■■■ 4.04
FNTA-208ENST00000529687 UNC13AQ9UPW8 1703 aa39.62■■■■□ 3.93
FNTA-208ENST00000529687 SUPT5HO00267 1087 aaKnown RBP39.39■■■■□ 3.9
FNTA-208ENST00000529687 BICRAQ9NZM4 1560 aa39.22■■■■□ 3.87
FNTA-208ENST00000529687 PABPN1Q86U42 306 aaKnown RBP eCLIP39.13■■■■□ 3.86
FNTA-208ENST00000529687 CECR2Q9BXF3 1484 aa39■■■■□ 3.83
FNTA-208ENST00000529687 RSF1Q96T23 1441 aaPredicted RBP38.91■■■■□ 3.82
FNTA-208ENST00000529687 MROH2BQ7Z745 1585 aa38.77■■■■□ 3.8
FNTA-208ENST00000529687 BAZ1AQ9NRL2 1556 aaPredicted RBP38.76■■■■□ 3.79
FNTA-208ENST00000529687 SMARCA4P51532 1647 aa38.58■■■■□ 3.77
FNTA-208ENST00000529687 WIZO95785 1651 aa38.45■■■■□ 3.75
FNTA-208ENST00000529687 PEG3Q9GZU2 1588 aa38.09■■■■□ 3.69
FNTA-208ENST00000529687 EIF4G1Q04637 1599 aaKnown RBP38.07■■■■□ 3.68
FNTA-208ENST00000529687 TOP2AP11388 1531 aaKnown RBP38.04■■■■□ 3.68
FNTA-208ENST00000529687 ATAD2BQ9ULI0 1458 aa37.97■■■■□ 3.67
FNTA-208ENST00000529687 SMARCA2P51531 1590 aa37.95■■■■□ 3.67
FNTA-208ENST00000529687 BAZ1BQ9UIG0 1483 aaKnown RBP37.77■■■■□ 3.64
FNTA-208ENST00000529687 CCDC88BA6NC98 1476 aa37.67■■■■□ 3.62
FNTA-208ENST00000529687 NCAPD3P42695 1498 aa37.65■■■■□ 3.62
FNTA-208ENST00000529687 CHIC1Q5VXU3 224 aa37.64■■■■□ 3.62
FNTA-208ENST00000529687 HMGXB3Q12766 1538 aa37.58■■■■□ 3.61
FNTA-208ENST00000529687 CC2D2AQ9P2K1 1620 aa37.52■■■■□ 3.6
FNTA-208ENST00000529687 TRIM41Q8WV44 630 aa37.04■■■■□ 3.52
FNTA-208ENST00000529687 ABCC8Q09428 1581 aa36.86■■■■□ 3.49
FNTA-208ENST00000529687 CFTRP13569 1480 aa36.8■■■■□ 3.48
FNTA-208ENST00000529687 CADPSQ9ULU8 1353 aa36.7■■■■□ 3.47
FNTA-208ENST00000529687 WRNQ14191 1432 aaPredicted RBP eCLIP36.65■■■■□ 3.46
FNTA-208ENST00000529687 DNAJC5BQ9UF47 199 aa36.62■■■■□ 3.45
FNTA-208ENST00000529687 PRDM2Q13029 1718 aa36.58■■■■□ 3.45
FNTA-208ENST00000529687 SYNJ1O43426 1573 aa36.47■■■■□ 3.43
FNTA-208ENST00000529687 NESP48681 1621 aa36.39■■■■□ 3.42
FNTA-208ENST00000529687 LAMC3Q9Y6N6 1575 aa36.38■■■■□ 3.41
FNTA-208ENST00000529687 FAM9AQ8IZU1 332 aaPredicted RBP36.37■■■■□ 3.41
FNTA-208ENST00000529687 TOP2BQ02880 1626 aa36.33■■■■□ 3.41
FNTA-208ENST00000529687 FANCD2Q9BXW9 1451 aa36.3■■■■□ 3.4
FNTA-208ENST00000529687 BIVM-ERCC5R4GMW8 1640 aa36.28■■■■□ 3.4
FNTA-208ENST00000529687 CUX1P39880 1505 aa36.25■■■■□ 3.39
FNTA-208ENST00000529687 LOC105371045A0A1W2PR82 267 aa36.22■■■■□ 3.39
FNTA-208ENST00000529687 SOGA1O94964 1423 aa36.17■■■■□ 3.38
FNTA-208ENST00000529687 PDS5BQ9NTI5 1447 aa36.13■■■■□ 3.37
FNTA-208ENST00000529687 EEA1Q15075 1411 aa36.08■■■■□ 3.37
FNTA-208ENST00000529687 CEP164Q9UPV0 1460 aa36.08■■■■□ 3.37
FNTA-208ENST00000529687 RUSC2Q8N2Y8 1516 aa36.03■■■■□ 3.36
FNTA-208ENST00000529687 DNMBPQ6XZF7 1577 aa35.94■■■■□ 3.34
FNTA-208ENST00000529687 KIF21AQ7Z4S6 1674 aa35.94■■■■□ 3.34
FNTA-208ENST00000529687 CSRNP3Q8WYN3 585 aa35.92■■■■□ 3.34
FNTA-208ENST00000529687 TOPBP1Q92547 1522 aa35.89■■■■□ 3.34
FNTA-208ENST00000529687 EHMT2Q96KQ7 1210 aa35.88■■■■□ 3.33
FNTA-208ENST00000529687 FGD5Q6ZNL6 1462 aa35.88■■■■□ 3.33
FNTA-208ENST00000529687 URB2Q14146 1524 aaKnown RBP35.83■■■■□ 3.33
FNTA-208ENST00000529687 KIF27Q86VH2 1401 aa35.73■■■■□ 3.31
FNTA-208ENST00000529687 POLA1P09884 1462 aaPredicted RBP35.71■■■■□ 3.31
FNTA-208ENST00000529687 CUX2O14529 1486 aa35.65■■■■□ 3.3
FNTA-208ENST00000529687 MRC2Q9UBG0 1479 aa35.65■■■■□ 3.3
FNTA-208ENST00000529687 RAD54L2Q9Y4B4 1467 aa35.6■■■■□ 3.29
FNTA-208ENST00000529687 ERCC6Q03468 1493 aa35.6■■■■□ 3.29
FNTA-208ENST00000529687 KIF21BO75037 1637 aa35.59■■■■□ 3.29
FNTA-208ENST00000529687 GOLGA3Q08378 1498 aa35.59■■■■□ 3.29
FNTA-208ENST00000529687 ABCA10Q8WWZ4 1543 aa35.55■■■■□ 3.28
FNTA-208ENST00000529687 UBTFP17480 764 aaKnown RBP35.49■■■■□ 3.27
FNTA-208ENST00000529687 TNIKQ9UKE5 1360 aa35.46■■■■□ 3.27
FNTA-208ENST00000529687 WDR62O43379 1518 aa35.45■■■■□ 3.27
FNTA-208ENST00000529687 PRXQ9BXM0 1461 aa35.45■■■■□ 3.26
FNTA-208ENST00000529687 RAPGEF2Q9Y4G8 1499 aa35.44■■■■□ 3.26
FNTA-208ENST00000529687 IGF1RP08069 1367 aa35.41■■■■□ 3.26
FNTA-208ENST00000529687 WDR97A6NE52 1622 aa35.41■■■■□ 3.26
FNTA-208ENST00000529687 ERICH3Q5RHP9 1530 aa35.37■■■■□ 3.25
FNTA-208ENST00000529687 THOC2Q8NI27 1593 aaKnown RBP35.34■■■■□ 3.25
FNTA-208ENST00000529687 TARBP1Q13395 1621 aaKnown RBP35.34■■■■□ 3.25
FNTA-208ENST00000529687 TDRD9Q8NDG6 1382 aaKnown RBP35.28■■■■□ 3.24
FNTA-208ENST00000529687 CEP162Q5TB80 1403 aa35.28■■■■□ 3.24
FNTA-208ENST00000529687 ABCA5Q8WWZ7 1642 aa35.25■■■■□ 3.23
FNTA-208ENST00000529687 CARMIL1Q5VZK9 1371 aa35.24■■■■□ 3.23
FNTA-208ENST00000529687 GAPVD1Q14C86 1478 aa35.22■■■■□ 3.23
FNTA-208ENST00000529687 IFT140Q96RY7 1462 aa35.21■■■■□ 3.23
FNTA-208ENST00000529687 CUL7Q14999 1698 aa35.13■■■■□ 3.21
FNTA-208ENST00000529687 AQRO60306 1485 aaKnown RBP eCLIP35.06■■■■□ 3.29e-7■■■□□ 18.2
FNTA-208ENST00000529687 CLIP1P30622 1438 aa35.03■■■■□ 3.2
FNTA-208ENST00000529687 ZNF608Q9ULD9 1512 aaPredicted RBP35.02■■■■□ 3.2
FNTA-208ENST00000529687 PBRM1Q86U86 1689 aa34.99■■■■□ 3.19
FNTA-208ENST00000529687 RANGAP1P46060 587 aaPredicted RBP34.95■■■■□ 3.19
FNTA-208ENST00000529687 GRIN2BQ13224 1484 aa34.94■■■■□ 3.18
FNTA-208ENST00000529687 EIF4G3O43432 1585 aaKnown RBP34.89■■■■□ 3.18
FNTA-208ENST00000529687 FHAD1B1AJZ9 1412 aa34.83■■■■□ 3.17
FNTA-208ENST00000529687 ADAMTS12P58397 1594 aa34.8■■■■□ 3.16
FNTA-208ENST00000529687 CTTNBP2Q8WZ74 1663 aa34.73■■■■□ 3.15
FNTA-208ENST00000529687 SNAPC4Q5SXM2 1469 aa34.72■■■■□ 3.15
FNTA-208ENST00000529687 VPS8Q8N3P4 1428 aa34.7■■■■□ 3.15
FNTA-208ENST00000529687 ARHGAP35Q9NRY4 1499 aa34.68■■■■□ 3.14
FNTA-208ENST00000529687 ARAP1Q96P48 1450 aa34.66■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms