RNA–Protein interactions for RNA: ENST00000565211.1

DUX4-203, Transcript of double homeobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DUX4, Length 1,710 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4-203ENST00000565211 NISCHQ9Y2I1 1504 aa49.1■■■■■ 5.45
DUX4-203ENST00000565211 CCDC180Q9P1Z9 1646 aa42.94■■■■■ 4.47
DUX4-203ENST00000565211 ZCCHC6Q5VYS8 1495 aaKnown RBP41.27■■■■■ 4.2
DUX4-203ENST00000565211 DCAF1Q9Y4B6 1507 aa40.64■■■■■ 4.1
DUX4-203ENST00000565211 ABCC9O60706 1549 aa40.53■■■■■ 4.08
DUX4-203ENST00000565211 DCAF8L2P0C7V8 631 aa40.39■■■■■ 4.06
DUX4-203ENST00000565211 MYO15BQ96JP2 1530 aa40.19■■■■■ 4.02
DUX4-203ENST00000565211 NACADO15069 1562 aa39.95■■■■□ 3.99
DUX4-203ENST00000565211 SHROOM4Q9ULL8 1493 aa39.9■■■■□ 3.98
DUX4-203ENST00000565211 RB1CC1Q8TDY2 1594 aa39.62■■■■□ 3.93
DUX4-203ENST00000565211 SCRIBQ14160 1630 aa39.41■■■■□ 3.9
DUX4-203ENST00000565211 UNC13AQ9UPW8 1703 aa38.86■■■■□ 3.81
DUX4-203ENST00000565211 BICRAQ9NZM4 1560 aa38.42■■■■□ 3.74
DUX4-203ENST00000565211 SUPT5HO00267 1087 aaKnown RBP38.32■■■■□ 3.73
DUX4-203ENST00000565211 PABPN1Q86U42 306 aaKnown RBP eCLIP38.12■■■■□ 3.69
DUX4-203ENST00000565211 CECR2Q9BXF3 1484 aa38.11■■■■□ 3.69
DUX4-203ENST00000565211 RSF1Q96T23 1441 aaPredicted RBP38.03■■■■□ 3.68
DUX4-203ENST00000565211 BAZ1AQ9NRL2 1556 aaPredicted RBP37.94■■■■□ 3.66
DUX4-203ENST00000565211 MROH2BQ7Z745 1585 aa37.92■■■■□ 3.66
DUX4-203ENST00000565211 SMARCA4P51532 1647 aa37.79■■■■□ 3.64
DUX4-203ENST00000565211 WIZO95785 1651 aa37.62■■■■□ 3.61
DUX4-203ENST00000565211 PEG3Q9GZU2 1588 aa37.35■■■■□ 3.57
DUX4-203ENST00000565211 EIF4G1Q04637 1599 aaKnown RBP37.26■■■■□ 3.56
DUX4-203ENST00000565211 TOP2AP11388 1531 aaKnown RBP37.26■■■■□ 3.56
DUX4-203ENST00000565211 SMARCA2P51531 1590 aa37.16■■■■□ 3.54
DUX4-203ENST00000565211 ATAD2BQ9ULI0 1458 aa37.13■■■■□ 3.53
DUX4-203ENST00000565211 BAZ1BQ9UIG0 1483 aaKnown RBP36.94■■■■□ 3.5
DUX4-203ENST00000565211 HMGXB3Q12766 1538 aa36.84■■■■□ 3.49
DUX4-203ENST00000565211 NCAPD3P42695 1498 aa36.83■■■■□ 3.49
DUX4-203ENST00000565211 CCDC88BA6NC98 1476 aa36.81■■■■□ 3.48
DUX4-203ENST00000565211 CC2D2AQ9P2K1 1620 aa36.72■■■■□ 3.47
DUX4-203ENST00000565211 CHIC1Q5VXU3 224 aa36.68■■■■□ 3.46
DUX4-203ENST00000565211 TRIM41Q8WV44 630 aa36.05■■■■□ 3.36
DUX4-203ENST00000565211 ABCC8Q09428 1581 aa36.04■■■■□ 3.36
DUX4-203ENST00000565211 CFTRP13569 1480 aa36■■■■□ 3.35
DUX4-203ENST00000565211 PRDM2Q13029 1718 aa35.94■■■■□ 3.34
DUX4-203ENST00000565211 CADPSQ9ULU8 1353 aa35.85■■■■□ 3.33
DUX4-203ENST00000565211 WRNQ14191 1432 aaPredicted RBP eCLIP35.81■■■■□ 3.32
DUX4-203ENST00000565211 SYNJ1O43426 1573 aa35.7■■■■□ 3.31
DUX4-203ENST00000565211 DNAJC5BQ9UF47 199 aa35.69■■■■□ 3.3
DUX4-203ENST00000565211 LAMC3Q9Y6N6 1575 aa35.64■■■■□ 3.3
DUX4-203ENST00000565211 TOP2BQ02880 1626 aa35.58■■■■□ 3.29
DUX4-203ENST00000565211 BIVM-ERCC5R4GMW8 1640 aa35.57■■■■□ 3.29
DUX4-203ENST00000565211 NESP48681 1621 aa35.56■■■■□ 3.28
DUX4-203ENST00000565211 FANCD2Q9BXW9 1451 aa35.49■■■■□ 3.27
DUX4-203ENST00000565211 CUX1P39880 1505 aa35.47■■■■□ 3.27
DUX4-203ENST00000565211 FAM9AQ8IZU1 332 aaPredicted RBP35.36■■■■□ 3.25
DUX4-203ENST00000565211 SOGA1O94964 1423 aa35.31■■■■□ 3.24
DUX4-203ENST00000565211 PDS5BQ9NTI5 1447 aa35.3■■■■□ 3.24
DUX4-203ENST00000565211 EEA1Q15075 1411 aa35.3■■■■□ 3.24
DUX4-203ENST00000565211 CEP164Q9UPV0 1460 aa35.29■■■■□ 3.24
DUX4-203ENST00000565211 KIF21AQ7Z4S6 1674 aa35.21■■■■□ 3.23
DUX4-203ENST00000565211 LOC105371045A0A1W2PR82 267 aa35.21■■■■□ 3.23
DUX4-203ENST00000565211 DNMBPQ6XZF7 1577 aa35.21■■■■□ 3.23
DUX4-203ENST00000565211 RUSC2Q8N2Y8 1516 aa35.17■■■■□ 3.22
DUX4-203ENST00000565211 TOPBP1Q92547 1522 aa35.11■■■■□ 3.21
DUX4-203ENST00000565211 FGD5Q6ZNL6 1462 aa35.09■■■■□ 3.21
DUX4-203ENST00000565211 URB2Q14146 1524 aaKnown RBP35.06■■■■□ 3.2
DUX4-203ENST00000565211 CSRNP3Q8WYN3 585 aa35■■■■□ 3.19
DUX4-203ENST00000565211 POLA1P09884 1462 aaPredicted RBP34.94■■■■□ 3.18
DUX4-203ENST00000565211 KIF27Q86VH2 1401 aa34.91■■■■□ 3.18
DUX4-203ENST00000565211 MRC2Q9UBG0 1479 aa34.89■■■■□ 3.18
DUX4-203ENST00000565211 KIF21BO75037 1637 aa34.88■■■■□ 3.17
DUX4-203ENST00000565211 EHMT2Q96KQ7 1210 aa34.84■■■■□ 3.17
DUX4-203ENST00000565211 CUX2O14529 1486 aa34.83■■■■□ 3.17
DUX4-203ENST00000565211 GOLGA3Q08378 1498 aa34.8■■■■□ 3.16
DUX4-203ENST00000565211 ABCA10Q8WWZ4 1543 aa34.79■■■■□ 3.16
DUX4-203ENST00000565211 ERCC6Q03468 1493 aa34.78■■■■□ 3.16
DUX4-203ENST00000565211 RAD54L2Q9Y4B4 1467 aa34.78■■■■□ 3.16
DUX4-203ENST00000565211 WDR97A6NE52 1622 aa34.76■■■■□ 3.16
DUX4-203ENST00000565211 WDR62O43379 1518 aa34.74■■■■□ 3.15
DUX4-203ENST00000565211 THOC2Q8NI27 1593 aaKnown RBP34.67■■■■□ 3.14
DUX4-203ENST00000565211 PRXQ9BXM0 1461 aa34.67■■■■□ 3.14
DUX4-203ENST00000565211 ERICH3Q5RHP9 1530 aa34.65■■■■□ 3.14
DUX4-203ENST00000565211 TNIKQ9UKE5 1360 aa34.64■■■■□ 3.14
DUX4-203ENST00000565211 TARBP1Q13395 1621 aaKnown RBP34.62■■■■□ 3.13
DUX4-203ENST00000565211 RAPGEF2Q9Y4G8 1499 aa34.62■■■■□ 3.13
DUX4-203ENST00000565211 ABCA5Q8WWZ7 1642 aa34.56■■■■□ 3.12
DUX4-203ENST00000565211 IGF1RP08069 1367 aa34.56■■■■□ 3.12
DUX4-203ENST00000565211 UBTFP17480 764 aaKnown RBP34.52■■■■□ 3.12
DUX4-203ENST00000565211 CEP162Q5TB80 1403 aa34.47■■■■□ 3.11
DUX4-203ENST00000565211 IFT140Q96RY7 1462 aa34.45■■■■□ 3.11
DUX4-203ENST00000565211 CUL7Q14999 1698 aa34.43■■■■□ 3.1
DUX4-203ENST00000565211 GAPVD1Q14C86 1478 aa34.42■■■■□ 3.1
DUX4-203ENST00000565211 TDRD9Q8NDG6 1382 aaKnown RBP34.41■■■■□ 3.1
DUX4-203ENST00000565211 CARMIL1Q5VZK9 1371 aa34.4■■■■□ 3.1
DUX4-203ENST00000565211 PBRM1Q86U86 1689 aa34.32■■■■□ 3.08
DUX4-203ENST00000565211 PCGF6Q9BYE7 350 aa34.27■■■■□ 3.08
DUX4-203ENST00000565211 TRIM26Q12899 539 aaPredicted RBP34.23■■■■□ 3.07
DUX4-203ENST00000565211 ZNF608Q9ULD9 1512 aaPredicted RBP34.22■■■■□ 3.07
DUX4-203ENST00000565211 AQRO60306 1485 aaKnown RBP eCLIP34.22■■■■□ 3.07
DUX4-203ENST00000565211 CLIP1P30622 1438 aa34.21■■■■□ 3.07
DUX4-203ENST00000565211 EIF4G3O43432 1585 aaKnown RBP34.19■■■■□ 3.06
DUX4-203ENST00000565211 GRIN2BQ13224 1484 aa34.18■■■■□ 3.06
DUX4-203ENST00000565211 ADAMTS12P58397 1594 aa34.12■■■■□ 3.05
DUX4-203ENST00000565211 FHAD1B1AJZ9 1412 aa34.06■■■■□ 3.04
DUX4-203ENST00000565211 CTTNBP2Q8WZ74 1663 aa34.06■■■■□ 3.04
DUX4-203ENST00000565211 SNAPC4Q5SXM2 1469 aa33.96■■■■□ 3.03
DUX4-203ENST00000565211 RANGAP1P46060 587 aaPredicted RBP33.95■■■■□ 3.03
DUX4-203ENST00000565211 MAGI1Q96QZ7 1491 aaPredicted RBP33.92■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms