RNA–Protein interactions for RNA: ENST00000414822.7

CDKN1C-202, Transcript of cyclin dependent kinase inhibitor 1C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDKN1C, Length 2,051 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1C-202ENST00000414822 NISCHQ9Y2I1 1504 aa48.88■■■■■ 5.42
CDKN1C-202ENST00000414822 CCDC180Q9P1Z9 1646 aa42.4■■■■■ 4.38
CDKN1C-202ENST00000414822 ZCCHC6Q5VYS8 1495 aaKnown RBP41.11■■■■■ 4.17
CDKN1C-202ENST00000414822 DCAF8L2P0C7V8 631 aa40.53■■■■■ 4.08
CDKN1C-202ENST00000414822 DCAF1Q9Y4B6 1507 aa40.32■■■■■ 4.04
CDKN1C-202ENST00000414822 SHROOM4Q9ULL8 1493 aa40.28■■■■■ 4.04
CDKN1C-202ENST00000414822 ABCC9O60706 1549 aa40.09■■■■■ 4.01
CDKN1C-202ENST00000414822 MYO15BQ96JP2 1530 aa39.72■■■■□ 3.95
CDKN1C-202ENST00000414822 NACADO15069 1562 aa39.48■■■■□ 3.91
CDKN1C-202ENST00000414822 SCRIBQ14160 1630 aa39.2■■■■□ 3.87
CDKN1C-202ENST00000414822 RB1CC1Q8TDY2 1594 aa39.1■■■■□ 3.85
CDKN1C-202ENST00000414822 SUPT5HO00267 1087 aaKnown RBP38.88■■■■□ 3.81
CDKN1C-202ENST00000414822 UNC13AQ9UPW8 1703 aa38.31■■■■□ 3.72
CDKN1C-202ENST00000414822 RSF1Q96T23 1441 aaPredicted RBP38.07■■■■□ 3.68
CDKN1C-202ENST00000414822 CECR2Q9BXF3 1484 aa38.05■■■■□ 3.68
CDKN1C-202ENST00000414822 BICRAQ9NZM4 1560 aa37.94■■■■□ 3.66
CDKN1C-202ENST00000414822 PABPN1Q86U42 306 aaKnown RBP eCLIP37.92■■■■□ 3.66
CDKN1C-202ENST00000414822 MROH2BQ7Z745 1585 aa37.83■■■■□ 3.65
CDKN1C-202ENST00000414822 BAZ1AQ9NRL2 1556 aaPredicted RBP37.71■■■■□ 3.63
CDKN1C-202ENST00000414822 WIZO95785 1651 aa37.53■■■■□ 3.6
CDKN1C-202ENST00000414822 SMARCA4P51532 1647 aa37.52■■■■□ 3.6
CDKN1C-202ENST00000414822 CHIC1Q5VXU3 224 aa37.26■■■■□ 3.56
CDKN1C-202ENST00000414822 TOP2AP11388 1531 aaKnown RBP37.09■■■■□ 3.53
CDKN1C-202ENST00000414822 PEG3Q9GZU2 1588 aa36.98■■■■□ 3.51
CDKN1C-202ENST00000414822 ATAD2BQ9ULI0 1458 aa36.87■■■■□ 3.49
CDKN1C-202ENST00000414822 SMARCA2P51531 1590 aa36.8■■■■□ 3.48
CDKN1C-202ENST00000414822 EIF4G1Q04637 1599 aaKnown RBP36.8■■■■□ 3.48
CDKN1C-202ENST00000414822 CCDC88BA6NC98 1476 aa36.78■■■■□ 3.48
CDKN1C-202ENST00000414822 BAZ1BQ9UIG0 1483 aaKnown RBP36.7■■■■□ 3.47
CDKN1C-202ENST00000414822 TRIM41Q8WV44 630 aa36.47■■■■□ 3.43
CDKN1C-202ENST00000414822 NCAPD3P42695 1498 aa36.47■■■■□ 3.43
CDKN1C-202ENST00000414822 HMGXB3Q12766 1538 aa36.41■■■■□ 3.42
CDKN1C-202ENST00000414822 CC2D2AQ9P2K1 1620 aa36.21■■■■□ 3.39
CDKN1C-202ENST00000414822 ABCC8Q09428 1581 aa36.13■■■■□ 3.37
CDKN1C-202ENST00000414822 LOC105371045A0A1W2PR82 267 aa35.93■■■■□ 3.34
CDKN1C-202ENST00000414822 FAM9AQ8IZU1 332 aaPredicted RBP35.92■■■■□ 3.34
CDKN1C-202ENST00000414822 WRNQ14191 1432 aaPredicted RBP eCLIP35.83■■■■□ 3.33
CDKN1C-202ENST00000414822 CFTRP13569 1480 aa35.75■■■■□ 3.31
CDKN1C-202ENST00000414822 SYNJ1O43426 1573 aa35.66■■■■□ 3.3
CDKN1C-202ENST00000414822 CADPSQ9ULU8 1353 aa35.6■■■■□ 3.29
CDKN1C-202ENST00000414822 SOGA1O94964 1423 aa35.52■■■■□ 3.28
CDKN1C-202ENST00000414822 EHMT2Q96KQ7 1210 aa35.48■■■■□ 3.27
CDKN1C-202ENST00000414822 PRDM2Q13029 1718 aa35.47■■■■□ 3.27
CDKN1C-202ENST00000414822 TOP2BQ02880 1626 aa35.45■■■■□ 3.27
CDKN1C-202ENST00000414822 EEA1Q15075 1411 aa35.38■■■■□ 3.25
CDKN1C-202ENST00000414822 BIVM-ERCC5R4GMW8 1640 aa35.38■■■■□ 3.25
CDKN1C-202ENST00000414822 RUSC2Q8N2Y8 1516 aa35.37■■■■□ 3.25
CDKN1C-202ENST00000414822 DNAJC5BQ9UF47 199 aa35.36■■■■□ 3.25
CDKN1C-202ENST00000414822 CUX1P39880 1505 aa35.34■■■■□ 3.25
CDKN1C-202ENST00000414822 NESP48681 1621 aa35.27■■■■□ 3.24
CDKN1C-202ENST00000414822 CSRNP3Q8WYN3 585 aa35.26■■■■□ 3.24
CDKN1C-202ENST00000414822 FANCD2Q9BXW9 1451 aa35.23■■■■□ 3.23
CDKN1C-202ENST00000414822 LAMC3Q9Y6N6 1575 aa35.17■■■■□ 3.22
CDKN1C-202ENST00000414822 GOLGA3Q08378 1498 aa34.97■■■■□ 3.19
CDKN1C-202ENST00000414822 CEP164Q9UPV0 1460 aa34.97■■■■□ 3.19
CDKN1C-202ENST00000414822 PDS5BQ9NTI5 1447 aa34.94■■■■□ 3.18
CDKN1C-202ENST00000414822 FGD5Q6ZNL6 1462 aa34.93■■■■□ 3.18
CDKN1C-202ENST00000414822 KIF21BO75037 1637 aa34.91■■■■□ 3.18
CDKN1C-202ENST00000414822 UBTFP17480 764 aaKnown RBP34.91■■■■□ 3.18
CDKN1C-202ENST00000414822 DNMBPQ6XZF7 1577 aa34.9■■■■□ 3.18
CDKN1C-202ENST00000414822 TNIKQ9UKE5 1360 aa34.89■■■■□ 3.18
CDKN1C-202ENST00000414822 KIF27Q86VH2 1401 aa34.89■■■■□ 3.18
CDKN1C-202ENST00000414822 TOPBP1Q92547 1522 aa34.86■■■■□ 3.17
CDKN1C-202ENST00000414822 CUX2O14529 1486 aa34.78■■■■□ 3.16
CDKN1C-202ENST00000414822 CEP162Q5TB80 1403 aa34.78■■■■□ 3.16
CDKN1C-202ENST00000414822 URB2Q14146 1524 aaKnown RBP34.76■■■■□ 3.16
CDKN1C-202ENST00000414822 RAPGEF2Q9Y4G8 1499 aa34.76■■■■□ 3.16
CDKN1C-202ENST00000414822 KIF21AQ7Z4S6 1674 aa34.76■■■■□ 3.16
CDKN1C-202ENST00000414822 POLA1P09884 1462 aaPredicted RBP34.72■■■■□ 3.15
CDKN1C-202ENST00000414822 PRXQ9BXM0 1461 aa34.7■■■■□ 3.15
CDKN1C-202ENST00000414822 RAD54L2Q9Y4B4 1467 aa34.66■■■■□ 3.14
CDKN1C-202ENST00000414822 ERICH3Q5RHP9 1530 aa34.63■■■■□ 3.13
CDKN1C-202ENST00000414822 ABCA10Q8WWZ4 1543 aa34.58■■■■□ 3.13
CDKN1C-202ENST00000414822 IGF1RP08069 1367 aa34.57■■■■□ 3.12
CDKN1C-202ENST00000414822 PCGF6Q9BYE7 350 aa34.55■■■■□ 3.12
CDKN1C-202ENST00000414822 MRC2Q9UBG0 1479 aa34.48■■■■□ 3.11
CDKN1C-202ENST00000414822 CLIP1P30622 1438 aa34.45■■■■□ 3.11
CDKN1C-202ENST00000414822 CARMIL1Q5VZK9 1371 aa34.41■■■■□ 3.1
CDKN1C-202ENST00000414822 TRIM26Q12899 539 aaPredicted RBP34.4■■■■□ 3.1
CDKN1C-202ENST00000414822 WDR97A6NE52 1622 aa34.39■■■■□ 3.1
CDKN1C-202ENST00000414822 RANGAP1P46060 587 aaPredicted RBP34.38■■■■□ 3.09
CDKN1C-202ENST00000414822 ERCC6Q03468 1493 aa34.33■■■■□ 3.09
CDKN1C-202ENST00000414822 TDRD9Q8NDG6 1382 aaKnown RBP34.32■■■■□ 3.09
CDKN1C-202ENST00000414822 PPARGC1BQ86YN6 1023 aaKnown RBP34.3■■■■□ 3.08
CDKN1C-202ENST00000414822 TARBP1Q13395 1621 aaKnown RBP34.27■■■■□ 3.08
CDKN1C-202ENST00000414822 ABCA5Q8WWZ7 1642 aa34.26■■■■□ 3.07
CDKN1C-202ENST00000414822 WDR62O43379 1518 aa34.26■■■■□ 3.07
CDKN1C-202ENST00000414822 GAPVD1Q14C86 1478 aa34.24■■■■□ 3.07
CDKN1C-202ENST00000414822 CUL7Q14999 1698 aa34.2■■■■□ 3.06
CDKN1C-202ENST00000414822 VPS8Q8N3P4 1428 aa34.15■■■■□ 3.06
CDKN1C-202ENST00000414822 THOC2Q8NI27 1593 aaKnown RBP34.09■■■■□ 3.05
CDKN1C-202ENST00000414822 IFT140Q96RY7 1462 aa34.08■■■■□ 3.05
CDKN1C-202ENST00000414822 ARAP1Q96P48 1450 aa34.06■■■■□ 3.04
CDKN1C-202ENST00000414822 AQRO60306 1485 aaKnown RBP eCLIP34.05■■■■□ 3.041e-6■■■□□ 16.1
CDKN1C-202ENST00000414822 TTBK1Q5TCY1 1321 aaPredicted RBP34■■■■□ 3.03
CDKN1C-202ENST00000414822 ARHGAP35Q9NRY4 1499 aa34■■■■□ 3.03
CDKN1C-202ENST00000414822 ZNF608Q9ULD9 1512 aaPredicted RBP33.97■■■■□ 3.03
CDKN1C-202ENST00000414822 PBRM1Q86U86 1689 aa33.96■■■■□ 3.03
CDKN1C-202ENST00000414822 GRIN2BQ13224 1484 aa33.91■■■■□ 3.02
CDKN1C-202ENST00000414822 APLP2Q06481 763 aa33.89■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms