RNA–Protein interactions for RNA: ENST00000402685.6

PDZRN4-202, Transcript of PDZ domain containing ring finger 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PDZRN4, Length 3,347 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4-202ENST00000402685 NISCHQ9Y2I1 1504 aa38.57■■■■□ 3.77
PDZRN4-202ENST00000402685 SHROOM4Q9ULL8 1493 aa35.6■■■■□ 3.29
PDZRN4-202ENST00000402685 SUPT5HO00267 1087 aaKnown RBP35.48■■■■□ 3.27
PDZRN4-202ENST00000402685 PPARGC1BQ86YN6 1023 aaKnown RBP35.03■■■■□ 3.2
PDZRN4-202ENST00000402685 HRCP23327 699 aa34.99■■■■□ 3.19
PDZRN4-202ENST00000402685 PCGF6Q9BYE7 350 aa34.98■■■■□ 3.19
PDZRN4-202ENST00000402685 MYO15BQ96JP2 1530 aa34.25■■■■□ 3.07
PDZRN4-202ENST00000402685 CHIC1Q5VXU3 224 aa34.19■■■■□ 3.06
PDZRN4-202ENST00000402685 DCAF8L2P0C7V8 631 aa34.02■■■■□ 3.04
PDZRN4-202ENST00000402685 LOC105371045A0A1W2PR82 267 aa33.96■■■■□ 3.03
PDZRN4-202ENST00000402685 EHMT2Q96KQ7 1210 aa33.46■■■□□ 2.95
PDZRN4-202ENST00000402685 SCAF1Q9H7N4 1312 aaKnown RBP33.3■■■□□ 2.92
PDZRN4-202ENST00000402685 TRIM26Q12899 539 aaPredicted RBP33.25■■■□□ 2.91
PDZRN4-202ENST00000402685 PELP1Q8IZL8 1130 aaKnown RBP33.13■■■□□ 2.89
PDZRN4-202ENST00000402685 FAM9AQ8IZU1 332 aaPredicted RBP33.06■■■□□ 2.88
PDZRN4-202ENST00000402685 DCAF1Q9Y4B6 1507 aa32.87■■■□□ 2.85
PDZRN4-202ENST00000402685 ZEB1P37275 1124 aaPredicted RBP32.66■■■□□ 2.82
PDZRN4-202ENST00000402685 ZCCHC6Q5VYS8 1495 aaKnown RBP32.65■■■□□ 2.82
PDZRN4-202ENST00000402685 NEUROD1Q13562 356 aa32.54■■■□□ 2.8
PDZRN4-202ENST00000402685 TTBK1Q5TCY1 1321 aaPredicted RBP32.5■■■□□ 2.79
PDZRN4-202ENST00000402685 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.48■■■□□ 2.79
PDZRN4-202ENST00000402685 GTF3C3Q9Y5Q9 886 aa32.42■■■□□ 2.78
PDZRN4-202ENST00000402685 TRIM41Q8WV44 630 aa32.42■■■□□ 2.78
PDZRN4-202ENST00000402685 ACIN1Q9UKV3 1341 aaKnown RBP32.35■■■□□ 2.77
PDZRN4-202ENST00000402685 CCDC180Q9P1Z9 1646 aa32.33■■■□□ 2.77
PDZRN4-202ENST00000402685 CCER1Q8TC90 406 aaPredicted RBP32.29■■■□□ 2.76
PDZRN4-202ENST00000402685 YTHDC1Q96MU7 727 aaKnown RBP32.19■■■□□ 2.74
PDZRN4-202ENST00000402685 DIEXFQ68CQ4 756 aaKnown RBP32.06■■■□□ 2.72
PDZRN4-202ENST00000402685 CENPBP07199 599 aaPredicted RBP31.98■■■□□ 2.71
PDZRN4-202ENST00000402685 MYT1Q01538 1121 aa31.57■■■□□ 2.64
PDZRN4-202ENST00000402685 MIER1Q8N108 512 aa31.34■■■□□ 2.61
PDZRN4-202ENST00000402685 RSF1Q96T23 1441 aaPredicted RBP31.33■■■□□ 2.61
PDZRN4-202ENST00000402685 ZNF316A6NFI3 1004 aaPredicted RBP31.27■■■□□ 2.6
PDZRN4-202ENST00000402685 HNRNPUL2Q1KMD3 747 aaKnown RBP31.2■■■□□ 2.59
PDZRN4-202ENST00000402685 RB1CC1Q8TDY2 1594 aa31.19■■■□□ 2.58
PDZRN4-202ENST00000402685 RANGAP1P46060 587 aaPredicted RBP31.01■■■□□ 2.56
PDZRN4-202ENST00000402685 UBTFP17480 764 aaKnown RBP31■■■□□ 2.55
PDZRN4-202ENST00000402685 SCRIBQ14160 1630 aa30.99■■■□□ 2.55
PDZRN4-202ENST00000402685 ABCC9O60706 1549 aa30.93■■■□□ 2.54
PDZRN4-202ENST00000402685 BCANQ96GW7 911 aa30.73■■■□□ 2.51
PDZRN4-202ENST00000402685 CECR2Q9BXF3 1484 aa30.7■■■□□ 2.51
PDZRN4-202ENST00000402685 SUPT16HQ9Y5B9 1047 aaKnown RBP30.63■■■□□ 2.49
PDZRN4-202ENST00000402685 CEP162Q5TB80 1403 aa30.6■■■□□ 2.49
PDZRN4-202ENST00000402685 TSHZ2Q9NRE2 1034 aa30.47■■■□□ 2.47
PDZRN4-202ENST00000402685 SOGA1O94964 1423 aa30.45■■■□□ 2.47
PDZRN4-202ENST00000402685 MROH2BQ7Z745 1585 aa30.43■■■□□ 2.46
PDZRN4-202ENST00000402685 CCDC88BA6NC98 1476 aa30.41■■■□□ 2.46
PDZRN4-202ENST00000402685 BCL11AQ9H165 835 aa30.4■■■□□ 2.46
PDZRN4-202ENST00000402685 ABCC8Q09428 1581 aa30.39■■■□□ 2.46
PDZRN4-202ENST00000402685 CSRNP3Q8WYN3 585 aa30.38■■■□□ 2.45
PDZRN4-202ENST00000402685 KCNH8Q96L42 1107 aa30.37■■■□□ 2.45
PDZRN4-202ENST00000402685 APLP2Q06481 763 aa30.37■■■□□ 2.45
PDZRN4-202ENST00000402685 ANP32EQ9BTT0 268 aa30.36■■■□□ 2.45
PDZRN4-202ENST00000402685 RUSC2Q8N2Y8 1516 aa30.29■■■□□ 2.44
PDZRN4-202ENST00000402685 WIZO95785 1651 aa30.28■■■□□ 2.44
PDZRN4-202ENST00000402685 ITGAEP38570 1179 aa30.25■■■□□ 2.43
PDZRN4-202ENST00000402685 WRNQ14191 1432 aaPredicted RBP eCLIP30.2■■■□□ 2.42
PDZRN4-202ENST00000402685 TNIKQ9UKE5 1360 aa30.15■■■□□ 2.42
PDZRN4-202ENST00000402685 FKBP8Q14318 412 aa30.15■■■□□ 2.42
PDZRN4-202ENST00000402685 HIRIP3Q9BW71 556 aaPredicted RBP29.98■■■□□ 2.39
PDZRN4-202ENST00000402685 TRIM52Q96A61 297 aa29.93■■■□□ 2.38
PDZRN4-202ENST00000402685 DDX10Q13206 875 aaKnown RBP29.89■■■□□ 2.37
PDZRN4-202ENST00000402685 CLIP1P30622 1438 aa29.84■■■□□ 2.37
PDZRN4-202ENST00000402685 RBM19Q9Y4C8 960 aaKnown RBP29.83■■■□□ 2.37
PDZRN4-202ENST00000402685 PABPN1Q86U42 306 aaKnown RBP eCLIP29.8■■■□□ 2.36
PDZRN4-202ENST00000402685 GOLGA3Q08378 1498 aa29.78■■■□□ 2.36
PDZRN4-202ENST00000402685 NEFLP07196 543 aa29.77■■■□□ 2.36
PDZRN4-202ENST00000402685 IRX6P78412 446 aaPredicted RBP29.75■■■□□ 2.35
PDZRN4-202ENST00000402685 KANK4Q5T7N3 995 aaPredicted RBP29.74■■■□□ 2.35
PDZRN4-202ENST00000402685 DHX57Q6P158 1386 aaKnown RBP29.74■■■□□ 2.35
PDZRN4-202ENST00000402685 CLSPNQ9HAW4 1339 aa29.73■■■□□ 2.35
PDZRN4-202ENST00000402685 BAZ1AQ9NRL2 1556 aaPredicted RBP29.59■■■□□ 2.33
PDZRN4-202ENST00000402685 ERICH6Q7L0X2 663 aa29.58■■■□□ 2.33
PDZRN4-202ENST00000402685 SIN3AQ96ST3 1273 aa29.57■■■□□ 2.32
PDZRN4-202ENST00000402685 VPS8Q8N3P4 1428 aa29.55■■■□□ 2.32
PDZRN4-202ENST00000402685 EIF4G1Q04637 1599 aaKnown RBP29.55■■■□□ 2.32
PDZRN4-202ENST00000402685 MSH5O43196 834 aa29.55■■■□□ 2.32
PDZRN4-202ENST00000402685 EEA1Q15075 1411 aa29.47■■■□□ 2.31
PDZRN4-202ENST00000402685 RAPGEF2Q9Y4G8 1499 aa29.46■■■□□ 2.31
PDZRN4-202ENST00000402685 ATP1B4Q9UN42 357 aaPredicted RBP29.42■■■□□ 2.3
PDZRN4-202ENST00000402685 CEP164Q9UPV0 1460 aa29.41■■■□□ 2.3
PDZRN4-202ENST00000402685 SMARCA2P51531 1590 aa29.37■■■□□ 2.29
PDZRN4-202ENST00000402685 FAM50AQ14320 339 aaKnown RBP29.33■■■□□ 2.29
PDZRN4-202ENST00000402685 NACADO15069 1562 aa29.33■■■□□ 2.29
PDZRN4-202ENST00000402685 TOP2AP11388 1531 aaKnown RBP29.33■■■□□ 2.28
PDZRN4-202ENST00000402685 ANP32CO43423 234 aa29.3■■■□□ 2.28
PDZRN4-202ENST00000402685 HNRNPUQ00839 825 aaKnown RBP eCLIP29.25■■■□□ 2.27
PDZRN4-202ENST00000402685 CNGB1Q14028 1251 aaPredicted RBP29.25■■■□□ 2.27
PDZRN4-202ENST00000402685 KIF21BO75037 1637 aa29.22■■■□□ 2.27
PDZRN4-202ENST00000402685 NBR1Q14596 966 aa29.22■■■□□ 2.27
PDZRN4-202ENST00000402685 CDK11AQ9UQ88 783 aaPredicted RBP29.22■■■□□ 2.27
PDZRN4-202ENST00000402685 RAB3GAP2Q9H2M9 1393 aa29.17■■■□□ 2.26
PDZRN4-202ENST00000402685 SENP3-EIF4A1A0A087X0R7 540 aa29.15■■■□□ 2.26
PDZRN4-202ENST00000402685 P3H3Q8IVL6 736 aa29.12■■■□□ 2.25
PDZRN4-202ENST00000402685 CCNB3Q8WWL7 1395 aa29.11■■■□□ 2.25
PDZRN4-202ENST00000402685 SYNJ1O43426 1573 aa29.1■■■□□ 2.25
PDZRN4-202ENST00000402685 PPP1R15AO75807 674 aaPredicted RBP29.09■■■□□ 2.25
PDZRN4-202ENST00000402685 DEKP35659 375 aaKnown RBP29.05■■■□□ 2.24
PDZRN4-202ENST00000402685 SMARCA4P51532 1647 aa29.05■■■□□ 2.24
PDZRN4-202ENST00000402685 B4GALNT3Q6L9W6 998 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms