RNA–Protein interactions for RNA: ENST00000279068.10

LSM14B-201, Transcript of LSM family member 14B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LSM14B, Length 2,548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14B-201ENST00000279068 NISCHQ9Y2I1 1504 aa48.3■■■■■ 5.32
LSM14B-201ENST00000279068 CCDC180Q9P1Z9 1646 aa41.74■■■■■ 4.27
LSM14B-201ENST00000279068 ZCCHC6Q5VYS8 1495 aaKnown RBP40.61■■■■■ 4.09
LSM14B-201ENST00000279068 DCAF8L2P0C7V8 631 aa40.17■■■■■ 4.02
LSM14B-201ENST00000279068 SHROOM4Q9ULL8 1493 aa39.98■■■■□ 3.99
LSM14B-201ENST00000279068 DCAF1Q9Y4B6 1507 aa39.8■■■■□ 3.96
LSM14B-201ENST00000279068 ABCC9O60706 1549 aa39.49■■■■□ 3.91
LSM14B-201ENST00000279068 MYO15BQ96JP2 1530 aa39.16■■■■□ 3.86
LSM14B-201ENST00000279068 NACADO15069 1562 aa38.89■■■■□ 3.82
LSM14B-201ENST00000279068 SUPT5HO00267 1087 aaKnown RBP38.69■■■■□ 3.78
LSM14B-201ENST00000279068 SCRIBQ14160 1630 aa38.69■■■■□ 3.78
LSM14B-201ENST00000279068 RB1CC1Q8TDY2 1594 aa38.49■■■■□ 3.75
LSM14B-201ENST00000279068 RSF1Q96T23 1441 aaPredicted RBP37.7■■■■□ 3.63
LSM14B-201ENST00000279068 UNC13AQ9UPW8 1703 aa37.69■■■■□ 3.62
LSM14B-201ENST00000279068 CECR2Q9BXF3 1484 aa37.62■■■■□ 3.61
LSM14B-201ENST00000279068 PABPN1Q86U42 306 aaKnown RBP eCLIP37.45■■■■□ 3.59
LSM14B-201ENST00000279068 MROH2BQ7Z745 1585 aa37.4■■■■□ 3.58
LSM14B-201ENST00000279068 BICRAQ9NZM4 1560 aa37.36■■■■□ 3.57
LSM14B-201ENST00000279068 BAZ1AQ9NRL2 1556 aaPredicted RBP37.23■■■■□ 3.55
LSM14B-201ENST00000279068 CHIC1Q5VXU3 224 aa37.12■■■■□ 3.53
LSM14B-201ENST00000279068 WIZO95785 1651 aa37.09■■■■□ 3.53
LSM14B-201ENST00000279068 SMARCA4P51532 1647 aa37.01■■■■□ 3.52
LSM14B-201ENST00000279068 TOP2AP11388 1531 aaKnown RBP36.63■■■■□ 3.45
LSM14B-201ENST00000279068 PEG3Q9GZU2 1588 aa36.47■■■■□ 3.43
LSM14B-201ENST00000279068 CCDC88BA6NC98 1476 aa36.39■■■■□ 3.42
LSM14B-201ENST00000279068 ATAD2BQ9ULI0 1458 aa36.39■■■■□ 3.42
LSM14B-201ENST00000279068 SMARCA2P51531 1590 aa36.33■■■■□ 3.41
LSM14B-201ENST00000279068 TRIM41Q8WV44 630 aa36.27■■■■□ 3.4
LSM14B-201ENST00000279068 EIF4G1Q04637 1599 aaKnown RBP36.23■■■■□ 3.39
LSM14B-201ENST00000279068 BAZ1BQ9UIG0 1483 aaKnown RBP36.21■■■■□ 3.39
LSM14B-201ENST00000279068 NCAPD3P42695 1498 aa35.97■■■■□ 3.35
LSM14B-201ENST00000279068 HMGXB3Q12766 1538 aa35.86■■■■□ 3.33
LSM14B-201ENST00000279068 LOC105371045A0A1W2PR82 267 aa35.85■■■■□ 3.33
LSM14B-201ENST00000279068 ABCC8Q09428 1581 aa35.77■■■■□ 3.32
LSM14B-201ENST00000279068 FAM9AQ8IZU1 332 aaPredicted RBP35.74■■■■□ 3.31
LSM14B-201ENST00000279068 CC2D2AQ9P2K1 1620 aa35.62■■■■□ 3.29
LSM14B-201ENST00000279068 WRNQ14191 1432 aaPredicted RBP eCLIP35.47■■■■□ 3.27
LSM14B-201ENST00000279068 EHMT2Q96KQ7 1210 aa35.33■■■■□ 3.25
LSM14B-201ENST00000279068 CFTRP13569 1480 aa35.3■■■■□ 3.24
LSM14B-201ENST00000279068 SYNJ1O43426 1573 aa35.26■■■■□ 3.24
LSM14B-201ENST00000279068 SOGA1O94964 1423 aa35.24■■■■□ 3.23
LSM14B-201ENST00000279068 CADPSQ9ULU8 1353 aa35.15■■■■□ 3.22
LSM14B-201ENST00000279068 RUSC2Q8N2Y8 1516 aa35.08■■■■□ 3.21
LSM14B-201ENST00000279068 EEA1Q15075 1411 aa35.06■■■■□ 3.2
LSM14B-201ENST00000279068 TOP2BQ02880 1626 aa35.03■■■■□ 3.2
LSM14B-201ENST00000279068 CSRNP3Q8WYN3 585 aa35.02■■■■□ 3.2
LSM14B-201ENST00000279068 BIVM-ERCC5R4GMW8 1640 aa34.92■■■■□ 3.18
LSM14B-201ENST00000279068 CUX1P39880 1505 aa34.91■■■■□ 3.18
LSM14B-201ENST00000279068 PRDM2Q13029 1718 aa34.91■■■■□ 3.18
LSM14B-201ENST00000279068 DNAJC5BQ9UF47 199 aa34.88■■■■□ 3.17
LSM14B-201ENST00000279068 NESP48681 1621 aa34.78■■■■□ 3.16
LSM14B-201ENST00000279068 FANCD2Q9BXW9 1451 aa34.75■■■■□ 3.15
LSM14B-201ENST00000279068 UBTFP17480 764 aaKnown RBP34.7■■■■□ 3.15
LSM14B-201ENST00000279068 GOLGA3Q08378 1498 aa34.66■■■■□ 3.14
LSM14B-201ENST00000279068 TNIKQ9UKE5 1360 aa34.65■■■■□ 3.14
LSM14B-201ENST00000279068 LAMC3Q9Y6N6 1575 aa34.62■■■■□ 3.13
LSM14B-201ENST00000279068 CEP164Q9UPV0 1460 aa34.62■■■■□ 3.13
LSM14B-201ENST00000279068 PCGF6Q9BYE7 350 aa34.6■■■■□ 3.13
LSM14B-201ENST00000279068 KIF21BO75037 1637 aa34.55■■■■□ 3.12
LSM14B-201ENST00000279068 KIF27Q86VH2 1401 aa34.53■■■■□ 3.12
LSM14B-201ENST00000279068 CEP162Q5TB80 1403 aa34.53■■■■□ 3.12
LSM14B-201ENST00000279068 FGD5Q6ZNL6 1462 aa34.5■■■■□ 3.11
LSM14B-201ENST00000279068 RAPGEF2Q9Y4G8 1499 aa34.46■■■■□ 3.11
LSM14B-201ENST00000279068 PDS5BQ9NTI5 1447 aa34.45■■■■□ 3.11
LSM14B-201ENST00000279068 DNMBPQ6XZF7 1577 aa34.41■■■■□ 3.1
LSM14B-201ENST00000279068 TOPBP1Q92547 1522 aa34.39■■■■□ 3.1
LSM14B-201ENST00000279068 CUX2O14529 1486 aa34.39■■■■□ 3.1
LSM14B-201ENST00000279068 TRIM26Q12899 539 aaPredicted RBP34.38■■■■□ 3.09
LSM14B-201ENST00000279068 PRXQ9BXM0 1461 aa34.36■■■■□ 3.09
LSM14B-201ENST00000279068 URB2Q14146 1524 aaKnown RBP34.28■■■■□ 3.08
LSM14B-201ENST00000279068 POLA1P09884 1462 aaPredicted RBP34.27■■■■□ 3.08
LSM14B-201ENST00000279068 ERICH3Q5RHP9 1530 aa34.26■■■■□ 3.07
LSM14B-201ENST00000279068 RAD54L2Q9Y4B4 1467 aa34.25■■■■□ 3.07
LSM14B-201ENST00000279068 IGF1RP08069 1367 aa34.24■■■■□ 3.07
LSM14B-201ENST00000279068 PPARGC1BQ86YN6 1023 aaKnown RBP34.22■■■■□ 3.07
LSM14B-201ENST00000279068 KIF21AQ7Z4S6 1674 aa34.2■■■■□ 3.07
LSM14B-201ENST00000279068 CLIP1P30622 1438 aa34.18■■■■□ 3.06
LSM14B-201ENST00000279068 RANGAP1P46060 587 aaPredicted RBP34.17■■■■□ 3.06
LSM14B-201ENST00000279068 ABCA10Q8WWZ4 1543 aa34.15■■■■□ 3.06
LSM14B-201ENST00000279068 CARMIL1Q5VZK9 1371 aa34.07■■■■□ 3.05
LSM14B-201ENST00000279068 MRC2Q9UBG0 1479 aa33.95■■■■□ 3.02
LSM14B-201ENST00000279068 TDRD9Q8NDG6 1382 aaKnown RBP33.93■■■■□ 3.02
LSM14B-201ENST00000279068 VPS8Q8N3P4 1428 aa33.89■■■■□ 3.02
LSM14B-201ENST00000279068 TTBK1Q5TCY1 1321 aaPredicted RBP33.88■■■■□ 3.01
LSM14B-201ENST00000279068 WDR97A6NE52 1622 aa33.87■■■■□ 3.01
LSM14B-201ENST00000279068 GAPVD1Q14C86 1478 aa33.81■■■■□ 3
LSM14B-201ENST00000279068 HRCP23327 699 aa33.8■■■■□ 3
LSM14B-201ENST00000279068 ERCC6Q03468 1493 aa33.79■■■■□ 3
LSM14B-201ENST00000279068 TARBP1Q13395 1621 aaKnown RBP33.78■■■■□ 3
LSM14B-201ENST00000279068 ABCA5Q8WWZ7 1642 aa33.78■■■■□ 3
LSM14B-201ENST00000279068 ARAP1Q96P48 1450 aa33.75■■■□□ 2.99
LSM14B-201ENST00000279068 CUL7Q14999 1698 aa33.74■■■□□ 2.99
LSM14B-201ENST00000279068 APLP2Q06481 763 aa33.72■■■□□ 2.99
LSM14B-201ENST00000279068 WDR62O43379 1518 aa33.71■■■□□ 2.99
LSM14B-201ENST00000279068 ARHGAP35Q9NRY4 1499 aa33.69■■■□□ 2.98
LSM14B-201ENST00000279068 AQRO60306 1485 aaKnown RBP eCLIP33.63■■■□□ 2.971e-6■■■■□ 21.8
LSM14B-201ENST00000279068 IFT140Q96RY7 1462 aa33.59■■■□□ 2.97
LSM14B-201ENST00000279068 ZNF608Q9ULD9 1512 aaPredicted RBP33.5■■■□□ 2.95
LSM14B-201ENST00000279068 THOC2Q8NI27 1593 aaKnown RBP33.5■■■□□ 2.95
LSM14B-201ENST00000279068 P3H3Q8IVL6 736 aa33.46■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms