Protein–RNA interactions for Protein: Q9H2D6

TRIOBP, TRIO and F-actin-binding protein, humanhuman

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBPQ9H2D6 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
TRIOBPQ9H2D6 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC31.49■■■□□ 2.63
TRIOBPQ9H2D6 AC087741.3-201ENST00000624270 1347 ntBASIC31.49■■■□□ 2.63
TRIOBPQ9H2D6 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
TRIOBPQ9H2D6 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
TRIOBPQ9H2D6 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC31.43■■■□□ 2.62
TRIOBPQ9H2D6 RPS2-202ENST00000526522 924 ntTSL 2 BASIC31.43■■■□□ 2.62
TRIOBPQ9H2D6 AC044849.2-201ENST00000606596 710 ntBASIC31.42■■■□□ 2.62
TRIOBPQ9H2D6 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC31.41■■■□□ 2.62
TRIOBPQ9H2D6 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC31.41■■■□□ 2.62
TRIOBPQ9H2D6 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC31.39■■■□□ 2.62
TRIOBPQ9H2D6 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC31.39■■■□□ 2.62
TRIOBPQ9H2D6 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC31.38■■■□□ 2.61
TRIOBPQ9H2D6 MIR4449-201ENST00000578365 66 ntBASIC31.38■■■□□ 2.61
TRIOBPQ9H2D6 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC31.37■■■□□ 2.61
TRIOBPQ9H2D6 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC31.36■■■□□ 2.61
TRIOBPQ9H2D6 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC31.35■■■□□ 2.61
TRIOBPQ9H2D6 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
TRIOBPQ9H2D6 DUX4L28-201ENST00000623687 678 ntBASIC31.31■■■□□ 2.6
TRIOBPQ9H2D6 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC31.3■■■□□ 2.6
TRIOBPQ9H2D6 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC31.3■■■□□ 2.6
TRIOBPQ9H2D6 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC31.24■■■□□ 2.59
TRIOBPQ9H2D6 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC31.22■■■□□ 2.59
TRIOBPQ9H2D6 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC31.21■■■□□ 2.59
TRIOBPQ9H2D6 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
TRIOBPQ9H2D6 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC31.21■■■□□ 2.59
TRIOBPQ9H2D6 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
TRIOBPQ9H2D6 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
TRIOBPQ9H2D6 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC31.2■■■□□ 2.58
TRIOBPQ9H2D6 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC31.19■■■□□ 2.58
TRIOBPQ9H2D6 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC31.19■■■□□ 2.58
TRIOBPQ9H2D6 HSD17B1P1-201ENST00000590052 955 ntBASIC31.18■■■□□ 2.58
TRIOBPQ9H2D6 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
TRIOBPQ9H2D6 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC31.15■■■□□ 2.58
TRIOBPQ9H2D6 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC31.11■■■□□ 2.57
TRIOBPQ9H2D6 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC31.1■■■□□ 2.57
TRIOBPQ9H2D6 ZNRF2P2-203ENST00000454624 420 ntBASIC31.1■■■□□ 2.57
TRIOBPQ9H2D6 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC31.09■■■□□ 2.57
TRIOBPQ9H2D6 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC31.06■■■□□ 2.56
TRIOBPQ9H2D6 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
TRIOBPQ9H2D6 EBPL-202ENST00000378268 680 ntTSL 3 BASIC31.04■■■□□ 2.56
TRIOBPQ9H2D6 AL133380.1-201ENST00000506013 324 ntBASIC31.03■■■□□ 2.56
TRIOBPQ9H2D6 CHML-205ENST00000638160 705 ntTSL 3 BASIC31.02■■■□□ 2.56
TRIOBPQ9H2D6 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
TRIOBPQ9H2D6 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
TRIOBPQ9H2D6 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
TRIOBPQ9H2D6 BOD1-206ENST00000480951 814 ntTSL 2 BASIC31.01■■■□□ 2.56
TRIOBPQ9H2D6 AC005559.1-201ENST00000589661 871 ntBASIC31.01■■■□□ 2.56
TRIOBPQ9H2D6 MIR762-201ENST00000390236 83 ntBASIC31.01■■■□□ 2.55
TRIOBPQ9H2D6 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC31■■■□□ 2.55
TRIOBPQ9H2D6 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC31■■■□□ 2.55
TRIOBPQ9H2D6 CALM3-209ENST00000597743 577 ntTSL 4 BASIC30.98■■■□□ 2.55
TRIOBPQ9H2D6 HGH1-207ENST00000628266 258 ntTSL 5 BASIC30.98■■■□□ 2.55
TRIOBPQ9H2D6 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
TRIOBPQ9H2D6 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC30.97■■■□□ 2.55
TRIOBPQ9H2D6 MIR639-201ENST00000384974 98 ntBASIC30.96■■■□□ 2.55
TRIOBPQ9H2D6 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
TRIOBPQ9H2D6 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
TRIOBPQ9H2D6 BRD4-212ENST00000630599 726 ntTSL 2 BASIC30.91■■■□□ 2.54
TRIOBPQ9H2D6 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC30.89■■■□□ 2.54
TRIOBPQ9H2D6 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
TRIOBPQ9H2D6 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.82■■■□□ 2.52
TRIOBPQ9H2D6 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.81■■■□□ 2.52
TRIOBPQ9H2D6 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
TRIOBPQ9H2D6 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
TRIOBPQ9H2D6 AC145285.7-201ENST00000614819 1539 ntBASIC30.79■■■□□ 2.52
TRIOBPQ9H2D6 MACF1-219ENST00000484793 834 ntTSL 2 BASIC30.77■■■□□ 2.52
TRIOBPQ9H2D6 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC30.76■■■□□ 2.51
TRIOBPQ9H2D6 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
TRIOBPQ9H2D6 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC30.74■■■□□ 2.51
TRIOBPQ9H2D6 MVK-208ENST00000539696 608 ntTSL 5 BASIC30.73■■■□□ 2.51
TRIOBPQ9H2D6 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
TRIOBPQ9H2D6 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC30.72■■■□□ 2.51
TRIOBPQ9H2D6 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC30.72■■■□□ 2.51
TRIOBPQ9H2D6 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC30.71■■■□□ 2.51
TRIOBPQ9H2D6 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC30.7■■■□□ 2.5
TRIOBPQ9H2D6 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC30.68■■■□□ 2.5
TRIOBPQ9H2D6 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
TRIOBPQ9H2D6 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
TRIOBPQ9H2D6 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
TRIOBPQ9H2D6 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
TRIOBPQ9H2D6 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
TRIOBPQ9H2D6 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
TRIOBPQ9H2D6 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
TRIOBPQ9H2D6 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.62■■■□□ 2.49
TRIOBPQ9H2D6 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC30.62■■■□□ 2.49
TRIOBPQ9H2D6 MIR3648-2-201ENST00000581792 180 ntBASIC30.61■■■□□ 2.49
TRIOBPQ9H2D6 MIR3648-1-201ENST00000615959 180 ntBASIC30.61■■■□□ 2.49
TRIOBPQ9H2D6 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC30.59■■■□□ 2.49
TRIOBPQ9H2D6 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
TRIOBPQ9H2D6 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC30.56■■■□□ 2.48
TRIOBPQ9H2D6 AC016575.1-201ENST00000607026 382 ntBASIC30.55■■■□□ 2.48
TRIOBPQ9H2D6 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC30.55■■■□□ 2.48
TRIOBPQ9H2D6 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
TRIOBPQ9H2D6 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC30.54■■■□□ 2.48
TRIOBPQ9H2D6 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC30.54■■■□□ 2.48
TRIOBPQ9H2D6 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC30.54■■■□□ 2.48
TRIOBPQ9H2D6 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC30.53■■■□□ 2.48
TRIOBPQ9H2D6 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
TRIOBPQ9H2D6 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms