Protein–RNA interactions for Protein: Q9H0E9

BRD8, Bromodomain-containing protein 8, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD8Q9H0E9 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
BRD8Q9H0E9 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
BRD8Q9H0E9 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC28.5■■■□□ 2.15
BRD8Q9H0E9 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC28.5■■■□□ 2.15
BRD8Q9H0E9 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
BRD8Q9H0E9 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
BRD8Q9H0E9 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
BRD8Q9H0E9 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC28.46■■■□□ 2.15
BRD8Q9H0E9 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC28.46■■■□□ 2.15
BRD8Q9H0E9 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC28.43■■■□□ 2.14
BRD8Q9H0E9 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
BRD8Q9H0E9 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
BRD8Q9H0E9 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC28.41■■■□□ 2.14
BRD8Q9H0E9 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
BRD8Q9H0E9 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
BRD8Q9H0E9 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC28.4■■■□□ 2.14
BRD8Q9H0E9 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
BRD8Q9H0E9 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
BRD8Q9H0E9 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
BRD8Q9H0E9 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC28.37■■■□□ 2.13
BRD8Q9H0E9 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC28.37■■■□□ 2.13
BRD8Q9H0E9 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
BRD8Q9H0E9 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC28.37■■■□□ 2.13
BRD8Q9H0E9 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
BRD8Q9H0E9 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
BRD8Q9H0E9 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC28.35■■■□□ 2.13
BRD8Q9H0E9 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
BRD8Q9H0E9 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC28.34■■■□□ 2.13
BRD8Q9H0E9 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
BRD8Q9H0E9 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
BRD8Q9H0E9 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.12
BRD8Q9H0E9 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
BRD8Q9H0E9 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC28.29■■■□□ 2.12
BRD8Q9H0E9 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC28.29■■■□□ 2.12
BRD8Q9H0E9 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
BRD8Q9H0E9 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
BRD8Q9H0E9 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
BRD8Q9H0E9 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.11
BRD8Q9H0E9 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
BRD8Q9H0E9 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
BRD8Q9H0E9 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
BRD8Q9H0E9 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
BRD8Q9H0E9 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
BRD8Q9H0E9 AC120057.4-201ENST00000624722 1615 ntBASIC28.21■■■□□ 2.11
BRD8Q9H0E9 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC28.21■■■□□ 2.11
BRD8Q9H0E9 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC28.21■■■□□ 2.11
BRD8Q9H0E9 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
BRD8Q9H0E9 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC28.2■■■□□ 2.11
BRD8Q9H0E9 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC28.2■■■□□ 2.1
BRD8Q9H0E9 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC28.2■■■□□ 2.1
BRD8Q9H0E9 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
BRD8Q9H0E9 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC28.18■■■□□ 2.1
BRD8Q9H0E9 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
BRD8Q9H0E9 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
BRD8Q9H0E9 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
BRD8Q9H0E9 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
BRD8Q9H0E9 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
BRD8Q9H0E9 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
BRD8Q9H0E9 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
BRD8Q9H0E9 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
BRD8Q9H0E9 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
BRD8Q9H0E9 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
BRD8Q9H0E9 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC28.12■■■□□ 2.09
BRD8Q9H0E9 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
BRD8Q9H0E9 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
BRD8Q9H0E9 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC28.11■■■□□ 2.09
BRD8Q9H0E9 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
BRD8Q9H0E9 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
BRD8Q9H0E9 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
BRD8Q9H0E9 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
BRD8Q9H0E9 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC28.08■■■□□ 2.09
BRD8Q9H0E9 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC28.07■■■□□ 2.08
BRD8Q9H0E9 ST7-205ENST00000393446 2114 ntTSL 5 BASIC28.06■■■□□ 2.08
BRD8Q9H0E9 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC28.04■■■□□ 2.08
BRD8Q9H0E9 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC28.03■■■□□ 2.08
BRD8Q9H0E9 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
BRD8Q9H0E9 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC28.02■■■□□ 2.08
BRD8Q9H0E9 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
BRD8Q9H0E9 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC28.02■■■□□ 2.08
BRD8Q9H0E9 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC28■■■□□ 2.07
BRD8Q9H0E9 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC28■■■□□ 2.07
BRD8Q9H0E9 ST7-202ENST00000323984 2142 ntTSL 5 BASIC27.98■■■□□ 2.07
BRD8Q9H0E9 ST7-207ENST00000393449 2127 ntTSL 5 BASIC27.98■■■□□ 2.07
BRD8Q9H0E9 KLF16-203ENST00000592313 508 ntTSL 3 BASIC27.98■■■□□ 2.07
BRD8Q9H0E9 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
BRD8Q9H0E9 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
BRD8Q9H0E9 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC27.93■■■□□ 2.06
BRD8Q9H0E9 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
BRD8Q9H0E9 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC27.9■■■□□ 2.06
BRD8Q9H0E9 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
BRD8Q9H0E9 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.06
BRD8Q9H0E9 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC27.88■■■□□ 2.05
BRD8Q9H0E9 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC27.87■■■□□ 2.05
BRD8Q9H0E9 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
BRD8Q9H0E9 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC27.86■■■□□ 2.05
BRD8Q9H0E9 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
BRD8Q9H0E9 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
BRD8Q9H0E9 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC27.85■■■□□ 2.05
BRD8Q9H0E9 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC27.84■■■□□ 2.05
BRD8Q9H0E9 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC27.83■■■□□ 2.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms