Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC14.87□□□□□ -0.03
KRTAP4-1Q9BYQ7 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC14.87□□□□□ -0.03
KRTAP4-1Q9BYQ7 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
KRTAP4-1Q9BYQ7 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
KRTAP4-1Q9BYQ7 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
KRTAP4-1Q9BYQ7 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
KRTAP4-1Q9BYQ7 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
KRTAP4-1Q9BYQ7 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
KRTAP4-1Q9BYQ7 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
KRTAP4-1Q9BYQ7 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC14.83□□□□□ -0.04
KRTAP4-1Q9BYQ7 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
KRTAP4-1Q9BYQ7 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
KRTAP4-1Q9BYQ7 AP006261.1-201ENST00000584783 668 ntBASIC14.8□□□□□ -0.04
KRTAP4-1Q9BYQ7 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRTAP4-1Q9BYQ7 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
KRTAP4-1Q9BYQ7 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC14.79□□□□□ -0.04
KRTAP4-1Q9BYQ7 HNRNPLP2-201ENST00000568980 1570 ntBASIC14.77□□□□□ -0.04
KRTAP4-1Q9BYQ7 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
KRTAP4-1Q9BYQ7 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRTAP4-1Q9BYQ7 EBPL-202ENST00000378268 680 ntTSL 3 BASIC14.75□□□□□ -0.05
KRTAP4-1Q9BYQ7 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC14.75□□□□□ -0.05
KRTAP4-1Q9BYQ7 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC14.75□□□□□ -0.05
KRTAP4-1Q9BYQ7 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
KRTAP4-1Q9BYQ7 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
KRTAP4-1Q9BYQ7 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
KRTAP4-1Q9BYQ7 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
KRTAP4-1Q9BYQ7 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC14.73□□□□□ -0.05
KRTAP4-1Q9BYQ7 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
KRTAP4-1Q9BYQ7 DUX4L28-201ENST00000623687 678 ntBASIC14.72□□□□□ -0.05
KRTAP4-1Q9BYQ7 ABHD17AP4-201ENST00000411545 909 ntBASIC14.71□□□□□ -0.05
KRTAP4-1Q9BYQ7 AC087741.3-201ENST00000624270 1347 ntBASIC14.7□□□□□ -0.06
KRTAP4-1Q9BYQ7 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
KRTAP4-1Q9BYQ7 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
KRTAP4-1Q9BYQ7 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
KRTAP4-1Q9BYQ7 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
KRTAP4-1Q9BYQ7 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
KRTAP4-1Q9BYQ7 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
KRTAP4-1Q9BYQ7 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
KRTAP4-1Q9BYQ7 MIR7108-201ENST00000614319 87 ntBASIC14.68□□□□□ -0.06
KRTAP4-1Q9BYQ7 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
KRTAP4-1Q9BYQ7 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC14.67□□□□□ -0.06
KRTAP4-1Q9BYQ7 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC14.67□□□□□ -0.06
KRTAP4-1Q9BYQ7 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRTAP4-1Q9BYQ7 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
KRTAP4-1Q9BYQ7 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRTAP4-1Q9BYQ7 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
KRTAP4-1Q9BYQ7 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC14.66□□□□□ -0.06
KRTAP4-1Q9BYQ7 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC14.66□□□□□ -0.06
KRTAP4-1Q9BYQ7 MIR3665-201ENST00000578708 105 ntBASIC14.66□□□□□ -0.06
KRTAP4-1Q9BYQ7 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC14.66□□□□□ -0.06
KRTAP4-1Q9BYQ7 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
KRTAP4-1Q9BYQ7 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
KRTAP4-1Q9BYQ7 PVT1-219ENST00000523427 938 ntTSL 3 BASIC14.65□□□□□ -0.06
KRTAP4-1Q9BYQ7 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC14.64□□□□□ -0.07
KRTAP4-1Q9BYQ7 MIR762-201ENST00000390236 83 ntBASIC14.64□□□□□ -0.07
KRTAP4-1Q9BYQ7 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
KRTAP4-1Q9BYQ7 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
KRTAP4-1Q9BYQ7 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
KRTAP4-1Q9BYQ7 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
KRTAP4-1Q9BYQ7 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRTAP4-1Q9BYQ7 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRTAP4-1Q9BYQ7 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
KRTAP4-1Q9BYQ7 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC14.61□□□□□ -0.07
KRTAP4-1Q9BYQ7 CHML-205ENST00000638160 705 ntTSL 3 BASIC14.61□□□□□ -0.07
KRTAP4-1Q9BYQ7 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
KRTAP4-1Q9BYQ7 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
KRTAP4-1Q9BYQ7 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
KRTAP4-1Q9BYQ7 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
KRTAP4-1Q9BYQ7 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
KRTAP4-1Q9BYQ7 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRTAP4-1Q9BYQ7 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
KRTAP4-1Q9BYQ7 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC14.57□□□□□ -0.08
KRTAP4-1Q9BYQ7 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
KRTAP4-1Q9BYQ7 MLEC-202ENST00000412616 841 ntTSL 3 BASIC14.57□□□□□ -0.08
KRTAP4-1Q9BYQ7 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
KRTAP4-1Q9BYQ7 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
KRTAP4-1Q9BYQ7 AC005559.1-201ENST00000589661 871 ntBASIC14.57□□□□□ -0.08
KRTAP4-1Q9BYQ7 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC14.57□□□□□ -0.08
KRTAP4-1Q9BYQ7 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KRTAP4-1Q9BYQ7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC14.56□□□□□ -0.08
KRTAP4-1Q9BYQ7 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KRTAP4-1Q9BYQ7 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC14.55□□□□□ -0.08
KRTAP4-1Q9BYQ7 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KRTAP4-1Q9BYQ7 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC14.54□□□□□ -0.08
KRTAP4-1Q9BYQ7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC14.54□□□□□ -0.08
KRTAP4-1Q9BYQ7 AC044849.2-201ENST00000606596 710 ntBASIC14.54□□□□□ -0.08
KRTAP4-1Q9BYQ7 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC14.53□□□□□ -0.08
KRTAP4-1Q9BYQ7 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC14.53□□□□□ -0.08
KRTAP4-1Q9BYQ7 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
KRTAP4-1Q9BYQ7 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
KRTAP4-1Q9BYQ7 HLA-V-202ENST00000446817 847 ntBASIC14.51□□□□□ -0.09
KRTAP4-1Q9BYQ7 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
KRTAP4-1Q9BYQ7 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC14.51□□□□□ -0.09
KRTAP4-1Q9BYQ7 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
KRTAP4-1Q9BYQ7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
KRTAP4-1Q9BYQ7 DENR-202ENST00000455982 1052 ntTSL 5 BASIC14.5□□□□□ -0.09
KRTAP4-1Q9BYQ7 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
KRTAP4-1Q9BYQ7 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC14.49□□□□□ -0.09
KRTAP4-1Q9BYQ7 ZNRF2P2-203ENST00000454624 420 ntBASIC14.49□□□□□ -0.09
KRTAP4-1Q9BYQ7 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms