Protein–RNA interactions for Protein: Q96AK3

APOBEC3D, DNA dC->dU-editing enzyme APOBEC-3D, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3DQ96AK3 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
APOBEC3DQ96AK3 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC24.09■■□□□ 1.45
APOBEC3DQ96AK3 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
APOBEC3DQ96AK3 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
APOBEC3DQ96AK3 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
APOBEC3DQ96AK3 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC24.06■■□□□ 1.44
APOBEC3DQ96AK3 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
APOBEC3DQ96AK3 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
APOBEC3DQ96AK3 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC24.02■■□□□ 1.44
APOBEC3DQ96AK3 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC24.01■■□□□ 1.43
APOBEC3DQ96AK3 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
APOBEC3DQ96AK3 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC23.99■■□□□ 1.43
APOBEC3DQ96AK3 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
APOBEC3DQ96AK3 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
APOBEC3DQ96AK3 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
APOBEC3DQ96AK3 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
APOBEC3DQ96AK3 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC23.96■■□□□ 1.43
APOBEC3DQ96AK3 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC23.96■■□□□ 1.43
APOBEC3DQ96AK3 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC23.96■■□□□ 1.43
APOBEC3DQ96AK3 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC23.96■■□□□ 1.43
APOBEC3DQ96AK3 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC23.96■■□□□ 1.43
APOBEC3DQ96AK3 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
APOBEC3DQ96AK3 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
APOBEC3DQ96AK3 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
APOBEC3DQ96AK3 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC23.91■■□□□ 1.42
APOBEC3DQ96AK3 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC23.9■■□□□ 1.42
APOBEC3DQ96AK3 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
APOBEC3DQ96AK3 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC23.9■■□□□ 1.42
APOBEC3DQ96AK3 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
APOBEC3DQ96AK3 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
APOBEC3DQ96AK3 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC23.87■■□□□ 1.41
APOBEC3DQ96AK3 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
APOBEC3DQ96AK3 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
APOBEC3DQ96AK3 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
APOBEC3DQ96AK3 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
APOBEC3DQ96AK3 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
APOBEC3DQ96AK3 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC23.83■■□□□ 1.41
APOBEC3DQ96AK3 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC23.82■■□□□ 1.4
APOBEC3DQ96AK3 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC23.82■■□□□ 1.4
APOBEC3DQ96AK3 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
APOBEC3DQ96AK3 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
APOBEC3DQ96AK3 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
APOBEC3DQ96AK3 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
APOBEC3DQ96AK3 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC23.8■■□□□ 1.4
APOBEC3DQ96AK3 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC23.79■■□□□ 1.4
APOBEC3DQ96AK3 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
APOBEC3DQ96AK3 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
APOBEC3DQ96AK3 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC23.79■■□□□ 1.4
APOBEC3DQ96AK3 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
APOBEC3DQ96AK3 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
APOBEC3DQ96AK3 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
APOBEC3DQ96AK3 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
APOBEC3DQ96AK3 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
APOBEC3DQ96AK3 AC120057.4-201ENST00000624722 1615 ntBASIC23.77■■□□□ 1.4
APOBEC3DQ96AK3 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
APOBEC3DQ96AK3 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
APOBEC3DQ96AK3 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC23.76■■□□□ 1.39
APOBEC3DQ96AK3 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
APOBEC3DQ96AK3 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC23.76■■□□□ 1.39
APOBEC3DQ96AK3 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
APOBEC3DQ96AK3 KLF16-203ENST00000592313 508 ntTSL 3 BASIC23.75■■□□□ 1.39
APOBEC3DQ96AK3 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
APOBEC3DQ96AK3 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
APOBEC3DQ96AK3 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC23.73■■□□□ 1.39
APOBEC3DQ96AK3 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
APOBEC3DQ96AK3 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
APOBEC3DQ96AK3 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
APOBEC3DQ96AK3 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC23.7■■□□□ 1.38
APOBEC3DQ96AK3 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
APOBEC3DQ96AK3 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
APOBEC3DQ96AK3 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
APOBEC3DQ96AK3 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC23.65■■□□□ 1.38
APOBEC3DQ96AK3 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
APOBEC3DQ96AK3 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
APOBEC3DQ96AK3 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
APOBEC3DQ96AK3 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
APOBEC3DQ96AK3 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
APOBEC3DQ96AK3 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
APOBEC3DQ96AK3 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
APOBEC3DQ96AK3 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
APOBEC3DQ96AK3 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
APOBEC3DQ96AK3 RARRES2P7-201ENST00000567349 469 ntBASIC23.59■■□□□ 1.37
APOBEC3DQ96AK3 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
APOBEC3DQ96AK3 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC23.57■■□□□ 1.36
APOBEC3DQ96AK3 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC23.57■■□□□ 1.36
APOBEC3DQ96AK3 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
APOBEC3DQ96AK3 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC23.56■■□□□ 1.36
APOBEC3DQ96AK3 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC23.55■■□□□ 1.36
APOBEC3DQ96AK3 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC23.53■■□□□ 1.36
APOBEC3DQ96AK3 ST7-205ENST00000393446 2114 ntTSL 5 BASIC23.53■■□□□ 1.36
APOBEC3DQ96AK3 AL133380.1-201ENST00000506013 324 ntBASIC23.52■■□□□ 1.36
APOBEC3DQ96AK3 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC23.51■■□□□ 1.35
APOBEC3DQ96AK3 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
APOBEC3DQ96AK3 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
APOBEC3DQ96AK3 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
APOBEC3DQ96AK3 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
APOBEC3DQ96AK3 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
APOBEC3DQ96AK3 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
APOBEC3DQ96AK3 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
APOBEC3DQ96AK3 SETD8P1-201ENST00000623146 1180 ntBASIC23.48■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms