Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
PTCD2Q8WV60 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC28.17■■■□□ 2.1
PTCD2Q8WV60 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
PTCD2Q8WV60 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
PTCD2Q8WV60 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
PTCD2Q8WV60 MVK-208ENST00000539696 608 ntTSL 5 BASIC28.11■■■□□ 2.09
PTCD2Q8WV60 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
PTCD2Q8WV60 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC28.09■■■□□ 2.09
PTCD2Q8WV60 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC28.09■■■□□ 2.09
PTCD2Q8WV60 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC28.09■■■□□ 2.09
PTCD2Q8WV60 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
PTCD2Q8WV60 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC28.08■■■□□ 2.09
PTCD2Q8WV60 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
PTCD2Q8WV60 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC28.07■■■□□ 2.08
PTCD2Q8WV60 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC28.07■■■□□ 2.08
PTCD2Q8WV60 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC28.06■■■□□ 2.08
PTCD2Q8WV60 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC28.04■■■□□ 2.08
PTCD2Q8WV60 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
PTCD2Q8WV60 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC28.03■■■□□ 2.08
PTCD2Q8WV60 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
PTCD2Q8WV60 EBPL-203ENST00000378270 579 ntTSL 2 BASIC28.02■■■□□ 2.08
PTCD2Q8WV60 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC28.01■■■□□ 2.07
PTCD2Q8WV60 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
PTCD2Q8WV60 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC28■■■□□ 2.07
PTCD2Q8WV60 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
PTCD2Q8WV60 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC27.97■■■□□ 2.07
PTCD2Q8WV60 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC27.97■■■□□ 2.07
PTCD2Q8WV60 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
PTCD2Q8WV60 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
PTCD2Q8WV60 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC27.96■■■□□ 2.07
PTCD2Q8WV60 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
PTCD2Q8WV60 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC27.94■■■□□ 2.06
PTCD2Q8WV60 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC27.94■■■□□ 2.06
PTCD2Q8WV60 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
PTCD2Q8WV60 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC27.93■■■□□ 2.06
PTCD2Q8WV60 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC27.92■■■□□ 2.06
PTCD2Q8WV60 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC27.91■■■□□ 2.06
PTCD2Q8WV60 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC27.88■■■□□ 2.05
PTCD2Q8WV60 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
PTCD2Q8WV60 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC27.86■■■□□ 2.05
PTCD2Q8WV60 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
PTCD2Q8WV60 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC27.86■■■□□ 2.05
PTCD2Q8WV60 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
PTCD2Q8WV60 ST7-205ENST00000393446 2114 ntTSL 5 BASIC27.85■■■□□ 2.05
PTCD2Q8WV60 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
PTCD2Q8WV60 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
PTCD2Q8WV60 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
PTCD2Q8WV60 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC27.84■■■□□ 2.05
PTCD2Q8WV60 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
PTCD2Q8WV60 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC27.82■■■□□ 2.04
PTCD2Q8WV60 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC27.82■■■□□ 2.04
PTCD2Q8WV60 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
PTCD2Q8WV60 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
PTCD2Q8WV60 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
PTCD2Q8WV60 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC27.8■■■□□ 2.04
PTCD2Q8WV60 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC27.8■■■□□ 2.04
PTCD2Q8WV60 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
PTCD2Q8WV60 ST7-202ENST00000323984 2142 ntTSL 5 BASIC27.79■■■□□ 2.04
PTCD2Q8WV60 ST7-207ENST00000393449 2127 ntTSL 5 BASIC27.79■■■□□ 2.04
PTCD2Q8WV60 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC27.78■■■□□ 2.04
PTCD2Q8WV60 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
PTCD2Q8WV60 RARRES2P7-201ENST00000567349 469 ntBASIC27.77■■■□□ 2.04
PTCD2Q8WV60 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC27.77■■■□□ 2.04
PTCD2Q8WV60 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC27.77■■■□□ 2.04
PTCD2Q8WV60 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
PTCD2Q8WV60 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC27.77■■■□□ 2.04
PTCD2Q8WV60 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC27.76■■■□□ 2.03
PTCD2Q8WV60 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC27.76■■■□□ 2.03
PTCD2Q8WV60 AC120057.4-201ENST00000624722 1615 ntBASIC27.76■■■□□ 2.03
PTCD2Q8WV60 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
PTCD2Q8WV60 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
PTCD2Q8WV60 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
PTCD2Q8WV60 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
PTCD2Q8WV60 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC27.73■■■□□ 2.03
PTCD2Q8WV60 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC27.73■■■□□ 2.03
PTCD2Q8WV60 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC27.71■■■□□ 2.03
PTCD2Q8WV60 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC27.71■■■□□ 2.03
PTCD2Q8WV60 KLF16-203ENST00000592313 508 ntTSL 3 BASIC27.71■■■□□ 2.03
PTCD2Q8WV60 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC27.71■■■□□ 2.03
PTCD2Q8WV60 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC27.69■■■□□ 2.02
PTCD2Q8WV60 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
PTCD2Q8WV60 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC27.69■■■□□ 2.02
PTCD2Q8WV60 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC27.69■■■□□ 2.02
PTCD2Q8WV60 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
PTCD2Q8WV60 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC27.66■■■□□ 2.02
PTCD2Q8WV60 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC27.65■■■□□ 2.02
PTCD2Q8WV60 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC27.64■■■□□ 2.02
PTCD2Q8WV60 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC27.64■■■□□ 2.01
PTCD2Q8WV60 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC27.62■■■□□ 2.01
PTCD2Q8WV60 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
PTCD2Q8WV60 SETD8P1-201ENST00000623146 1180 ntBASIC27.61■■■□□ 2.01
PTCD2Q8WV60 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
PTCD2Q8WV60 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
PTCD2Q8WV60 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
PTCD2Q8WV60 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC27.57■■■□□ 2
PTCD2Q8WV60 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
PTCD2Q8WV60 AC136428.2-201ENST00000563187 214 ntBASIC27.56■■■□□ 2
PTCD2Q8WV60 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
PTCD2Q8WV60 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC27.55■■■□□ 2
PTCD2Q8WV60 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms