Protein–RNA interactions for Protein: Q8IXZ2

ZC3H3, Zinc finger CCCH domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H3Q8IXZ2 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC30.53■■■□□ 2.48
ZC3H3Q8IXZ2 AP002365.1-201ENST00000603448 772 ntBASIC30.53■■■□□ 2.48
ZC3H3Q8IXZ2 AL031258.1-201ENST00000623562 325 ntBASIC30.52■■■□□ 2.48
ZC3H3Q8IXZ2 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC30.52■■■□□ 2.48
ZC3H3Q8IXZ2 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC30.51■■■□□ 2.47
ZC3H3Q8IXZ2 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC30.51■■■□□ 2.47
ZC3H3Q8IXZ2 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC30.49■■■□□ 2.47
ZC3H3Q8IXZ2 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC30.48■■■□□ 2.47
ZC3H3Q8IXZ2 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC30.47■■■□□ 2.47
ZC3H3Q8IXZ2 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.47■■■□□ 2.47
ZC3H3Q8IXZ2 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
ZC3H3Q8IXZ2 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
ZC3H3Q8IXZ2 EBPL-203ENST00000378270 579 ntTSL 2 BASIC30.46■■■□□ 2.47
ZC3H3Q8IXZ2 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC30.46■■■□□ 2.47
ZC3H3Q8IXZ2 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
ZC3H3Q8IXZ2 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC30.43■■■□□ 2.46
ZC3H3Q8IXZ2 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
ZC3H3Q8IXZ2 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
ZC3H3Q8IXZ2 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
ZC3H3Q8IXZ2 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC30.37■■■□□ 2.45
ZC3H3Q8IXZ2 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
ZC3H3Q8IXZ2 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC30.37■■■□□ 2.45
ZC3H3Q8IXZ2 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
ZC3H3Q8IXZ2 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
ZC3H3Q8IXZ2 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC30.35■■■□□ 2.45
ZC3H3Q8IXZ2 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.35■■■□□ 2.45
ZC3H3Q8IXZ2 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC30.34■■■□□ 2.45
ZC3H3Q8IXZ2 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC30.31■■■□□ 2.44
ZC3H3Q8IXZ2 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC30.3■■■□□ 2.44
ZC3H3Q8IXZ2 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
ZC3H3Q8IXZ2 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC30.3■■■□□ 2.44
ZC3H3Q8IXZ2 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
ZC3H3Q8IXZ2 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
ZC3H3Q8IXZ2 AC120057.4-201ENST00000624722 1615 ntBASIC30.29■■■□□ 2.44
ZC3H3Q8IXZ2 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC30.28■■■□□ 2.44
ZC3H3Q8IXZ2 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
ZC3H3Q8IXZ2 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
ZC3H3Q8IXZ2 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
ZC3H3Q8IXZ2 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.26■■■□□ 2.43
ZC3H3Q8IXZ2 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC30.25■■■□□ 2.43
ZC3H3Q8IXZ2 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
ZC3H3Q8IXZ2 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.24■■■□□ 2.43
ZC3H3Q8IXZ2 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.24■■■□□ 2.43
ZC3H3Q8IXZ2 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC30.24■■■□□ 2.43
ZC3H3Q8IXZ2 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC30.23■■■□□ 2.43
ZC3H3Q8IXZ2 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
ZC3H3Q8IXZ2 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
ZC3H3Q8IXZ2 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC30.22■■■□□ 2.43
ZC3H3Q8IXZ2 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
ZC3H3Q8IXZ2 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
ZC3H3Q8IXZ2 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
ZC3H3Q8IXZ2 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.19■■■□□ 2.42
ZC3H3Q8IXZ2 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
ZC3H3Q8IXZ2 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC30.18■■■□□ 2.42
ZC3H3Q8IXZ2 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
ZC3H3Q8IXZ2 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC30.16■■■□□ 2.42
ZC3H3Q8IXZ2 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
ZC3H3Q8IXZ2 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
ZC3H3Q8IXZ2 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.42
ZC3H3Q8IXZ2 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC30.13■■■□□ 2.41
ZC3H3Q8IXZ2 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
ZC3H3Q8IXZ2 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC30.11■■■□□ 2.41
ZC3H3Q8IXZ2 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
ZC3H3Q8IXZ2 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
ZC3H3Q8IXZ2 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC30.1■■■□□ 2.41
ZC3H3Q8IXZ2 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
ZC3H3Q8IXZ2 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC30.08■■■□□ 2.41
ZC3H3Q8IXZ2 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC30.05■■■□□ 2.4
ZC3H3Q8IXZ2 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
ZC3H3Q8IXZ2 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC30.04■■■□□ 2.4
ZC3H3Q8IXZ2 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
ZC3H3Q8IXZ2 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC30.04■■■□□ 2.4
ZC3H3Q8IXZ2 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC30.04■■■□□ 2.4
ZC3H3Q8IXZ2 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC30.04■■■□□ 2.4
ZC3H3Q8IXZ2 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
ZC3H3Q8IXZ2 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
ZC3H3Q8IXZ2 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC30.01■■■□□ 2.39
ZC3H3Q8IXZ2 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
ZC3H3Q8IXZ2 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
ZC3H3Q8IXZ2 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
ZC3H3Q8IXZ2 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
ZC3H3Q8IXZ2 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC29.97■■■□□ 2.39
ZC3H3Q8IXZ2 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
ZC3H3Q8IXZ2 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC29.96■■■□□ 2.39
ZC3H3Q8IXZ2 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
ZC3H3Q8IXZ2 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
ZC3H3Q8IXZ2 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
ZC3H3Q8IXZ2 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
ZC3H3Q8IXZ2 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC29.92■■■□□ 2.38
ZC3H3Q8IXZ2 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
ZC3H3Q8IXZ2 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
ZC3H3Q8IXZ2 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
ZC3H3Q8IXZ2 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
ZC3H3Q8IXZ2 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC29.89■■■□□ 2.38
ZC3H3Q8IXZ2 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC29.89■■■□□ 2.38
ZC3H3Q8IXZ2 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
ZC3H3Q8IXZ2 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
ZC3H3Q8IXZ2 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
ZC3H3Q8IXZ2 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
ZC3H3Q8IXZ2 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC29.8■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 9.1 ms