Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC30.93■■■□□ 2.54
CCDC65Q8IXS2 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC30.92■■■□□ 2.54
CCDC65Q8IXS2 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC30.92■■■□□ 2.54
CCDC65Q8IXS2 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC30.91■■■□□ 2.54
CCDC65Q8IXS2 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC30.9■■■□□ 2.54
CCDC65Q8IXS2 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
CCDC65Q8IXS2 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CCDC65Q8IXS2 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CCDC65Q8IXS2 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC30.85■■■□□ 2.53
CCDC65Q8IXS2 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC30.84■■■□□ 2.53
CCDC65Q8IXS2 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC30.83■■■□□ 2.53
CCDC65Q8IXS2 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC30.83■■■□□ 2.53
CCDC65Q8IXS2 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
CCDC65Q8IXS2 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC30.82■■■□□ 2.52
CCDC65Q8IXS2 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CCDC65Q8IXS2 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC30.8■■■□□ 2.52
CCDC65Q8IXS2 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC30.79■■■□□ 2.52
CCDC65Q8IXS2 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC30.78■■■□□ 2.52
CCDC65Q8IXS2 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
CCDC65Q8IXS2 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC30.75■■■□□ 2.51
CCDC65Q8IXS2 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
CCDC65Q8IXS2 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CCDC65Q8IXS2 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC30.72■■■□□ 2.51
CCDC65Q8IXS2 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC30.71■■■□□ 2.51
CCDC65Q8IXS2 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC30.71■■■□□ 2.51
CCDC65Q8IXS2 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
CCDC65Q8IXS2 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CCDC65Q8IXS2 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
CCDC65Q8IXS2 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC30.68■■■□□ 2.5
CCDC65Q8IXS2 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CCDC65Q8IXS2 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC65Q8IXS2 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CCDC65Q8IXS2 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
CCDC65Q8IXS2 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
CCDC65Q8IXS2 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CCDC65Q8IXS2 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC30.61■■■□□ 2.49
CCDC65Q8IXS2 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC30.61■■■□□ 2.49
CCDC65Q8IXS2 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
CCDC65Q8IXS2 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CCDC65Q8IXS2 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC30.6■■■□□ 2.49
CCDC65Q8IXS2 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC30.6■■■□□ 2.49
CCDC65Q8IXS2 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC30.6■■■□□ 2.49
CCDC65Q8IXS2 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
CCDC65Q8IXS2 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC30.58■■■□□ 2.49
CCDC65Q8IXS2 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC30.57■■■□□ 2.48
CCDC65Q8IXS2 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CCDC65Q8IXS2 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CCDC65Q8IXS2 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
CCDC65Q8IXS2 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CCDC65Q8IXS2 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
CCDC65Q8IXS2 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.55■■■□□ 2.48
CCDC65Q8IXS2 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CCDC65Q8IXS2 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CCDC65Q8IXS2 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC30.54■■■□□ 2.48
CCDC65Q8IXS2 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CCDC65Q8IXS2 AC120057.4-201ENST00000624722 1615 ntBASIC30.54■■■□□ 2.48
CCDC65Q8IXS2 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC30.53■■■□□ 2.48
CCDC65Q8IXS2 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
CCDC65Q8IXS2 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC30.5■■■□□ 2.47
CCDC65Q8IXS2 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CCDC65Q8IXS2 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
CCDC65Q8IXS2 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC30.48■■■□□ 2.47
CCDC65Q8IXS2 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.47■■■□□ 2.47
CCDC65Q8IXS2 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
CCDC65Q8IXS2 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CCDC65Q8IXS2 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC30.46■■■□□ 2.47
CCDC65Q8IXS2 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
CCDC65Q8IXS2 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
CCDC65Q8IXS2 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC30.41■■■□□ 2.46
CCDC65Q8IXS2 KLF16-203ENST00000592313 508 ntTSL 3 BASIC30.41■■■□□ 2.46
CCDC65Q8IXS2 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
CCDC65Q8IXS2 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC30.39■■■□□ 2.46
CCDC65Q8IXS2 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CCDC65Q8IXS2 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CCDC65Q8IXS2 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
CCDC65Q8IXS2 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CCDC65Q8IXS2 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC30.35■■■□□ 2.45
CCDC65Q8IXS2 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.34■■■□□ 2.45
CCDC65Q8IXS2 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
CCDC65Q8IXS2 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC30.34■■■□□ 2.45
CCDC65Q8IXS2 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC30.34■■■□□ 2.45
CCDC65Q8IXS2 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CCDC65Q8IXS2 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CCDC65Q8IXS2 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC30.31■■■□□ 2.44
CCDC65Q8IXS2 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC30.28■■■□□ 2.44
CCDC65Q8IXS2 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC30.28■■■□□ 2.44
CCDC65Q8IXS2 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
CCDC65Q8IXS2 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.23■■■□□ 2.43
CCDC65Q8IXS2 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.23■■■□□ 2.43
CCDC65Q8IXS2 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CCDC65Q8IXS2 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC30.23■■■□□ 2.43
CCDC65Q8IXS2 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.22■■■□□ 2.43
CCDC65Q8IXS2 RARRES2P7-201ENST00000567349 469 ntBASIC30.21■■■□□ 2.43
CCDC65Q8IXS2 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC30.21■■■□□ 2.43
CCDC65Q8IXS2 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
CCDC65Q8IXS2 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC30.18■■■□□ 2.42
CCDC65Q8IXS2 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC30.17■■■□□ 2.42
CCDC65Q8IXS2 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
CCDC65Q8IXS2 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CCDC65Q8IXS2 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC30.17■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms