Protein–RNA interactions for Protein: Q53R12

TM4SF20, Transmembrane 4 L6 family member 20, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF20Q53R12 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TM4SF20Q53R12 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TM4SF20Q53R12 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.38■■□□□ 1.01
TM4SF20Q53R12 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC21.37■■□□□ 1.01
TM4SF20Q53R12 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TM4SF20Q53R12 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
TM4SF20Q53R12 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC21.35■■□□□ 1.01
TM4SF20Q53R12 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TM4SF20Q53R12 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC21.34■■□□□ 1.01
TM4SF20Q53R12 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
TM4SF20Q53R12 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC21.33■■□□□ 1
TM4SF20Q53R12 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC21.32■■□□□ 1
TM4SF20Q53R12 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC21.32■■□□□ 1
TM4SF20Q53R12 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.32■■□□□ 1
TM4SF20Q53R12 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TM4SF20Q53R12 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
TM4SF20Q53R12 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TM4SF20Q53R12 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
TM4SF20Q53R12 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
TM4SF20Q53R12 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TM4SF20Q53R12 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
TM4SF20Q53R12 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
TM4SF20Q53R12 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TM4SF20Q53R12 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
TM4SF20Q53R12 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TM4SF20Q53R12 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC21.23■□□□□ 0.99
TM4SF20Q53R12 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC21.23■□□□□ 0.99
TM4SF20Q53R12 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC21.22■□□□□ 0.99
TM4SF20Q53R12 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TM4SF20Q53R12 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TM4SF20Q53R12 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TM4SF20Q53R12 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TM4SF20Q53R12 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC21.21■□□□□ 0.99
TM4SF20Q53R12 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TM4SF20Q53R12 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TM4SF20Q53R12 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC21.2■□□□□ 0.98
TM4SF20Q53R12 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TM4SF20Q53R12 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TM4SF20Q53R12 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC21.19■□□□□ 0.98
TM4SF20Q53R12 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TM4SF20Q53R12 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
TM4SF20Q53R12 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC21.19■□□□□ 0.98
TM4SF20Q53R12 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC21.18■□□□□ 0.98
TM4SF20Q53R12 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.18■□□□□ 0.98
TM4SF20Q53R12 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TM4SF20Q53R12 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TM4SF20Q53R12 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TM4SF20Q53R12 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TM4SF20Q53R12 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC21.16■□□□□ 0.98
TM4SF20Q53R12 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC21.16■□□□□ 0.98
TM4SF20Q53R12 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC21.15■□□□□ 0.98
TM4SF20Q53R12 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TM4SF20Q53R12 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
TM4SF20Q53R12 ST7-205ENST00000393446 2114 ntTSL 5 BASIC21.13■□□□□ 0.97
TM4SF20Q53R12 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC21.13■□□□□ 0.97
TM4SF20Q53R12 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC21.13■□□□□ 0.97
TM4SF20Q53R12 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC21.13■□□□□ 0.97
TM4SF20Q53R12 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TM4SF20Q53R12 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TM4SF20Q53R12 ST7-202ENST00000323984 2142 ntTSL 5 BASIC21.09■□□□□ 0.97
TM4SF20Q53R12 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TM4SF20Q53R12 ST7-207ENST00000393449 2127 ntTSL 5 BASIC21.09■□□□□ 0.97
TM4SF20Q53R12 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TM4SF20Q53R12 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC21.08■□□□□ 0.97
TM4SF20Q53R12 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC21.08■□□□□ 0.97
TM4SF20Q53R12 KLF16-203ENST00000592313 508 ntTSL 3 BASIC21.08■□□□□ 0.97
TM4SF20Q53R12 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
TM4SF20Q53R12 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC21.07■□□□□ 0.96
TM4SF20Q53R12 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TM4SF20Q53R12 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
TM4SF20Q53R12 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TM4SF20Q53R12 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TM4SF20Q53R12 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC21.04■□□□□ 0.96
TM4SF20Q53R12 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC21.02■□□□□ 0.96
TM4SF20Q53R12 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
TM4SF20Q53R12 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
TM4SF20Q53R12 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
TM4SF20Q53R12 RARRES2P7-201ENST00000567349 469 ntBASIC21.01■□□□□ 0.95
TM4SF20Q53R12 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
TM4SF20Q53R12 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC21■□□□□ 0.95
TM4SF20Q53R12 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC20.98■□□□□ 0.95
TM4SF20Q53R12 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC20.98■□□□□ 0.95
TM4SF20Q53R12 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TM4SF20Q53R12 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TM4SF20Q53R12 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TM4SF20Q53R12 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TM4SF20Q53R12 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TM4SF20Q53R12 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TM4SF20Q53R12 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
TM4SF20Q53R12 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TM4SF20Q53R12 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TM4SF20Q53R12 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TM4SF20Q53R12 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TM4SF20Q53R12 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TM4SF20Q53R12 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20.94■□□□□ 0.94
TM4SF20Q53R12 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TM4SF20Q53R12 AC120057.4-201ENST00000624722 1615 ntBASIC20.93■□□□□ 0.94
TM4SF20Q53R12 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TM4SF20Q53R12 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
TM4SF20Q53R12 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms