Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC33.11■■■□□ 2.89
SHROOM1Q2M3G4 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
SHROOM1Q2M3G4 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
SHROOM1Q2M3G4 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
SHROOM1Q2M3G4 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC33.08■■■□□ 2.89
SHROOM1Q2M3G4 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC33.08■■■□□ 2.89
SHROOM1Q2M3G4 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
SHROOM1Q2M3G4 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC33.07■■■□□ 2.88
SHROOM1Q2M3G4 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC33.06■■■□□ 2.88
SHROOM1Q2M3G4 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
SHROOM1Q2M3G4 AL133380.1-201ENST00000506013 324 ntBASIC33.01■■■□□ 2.87
SHROOM1Q2M3G4 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC33■■■□□ 2.87
SHROOM1Q2M3G4 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC33■■■□□ 2.87
SHROOM1Q2M3G4 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC33■■■□□ 2.87
SHROOM1Q2M3G4 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
SHROOM1Q2M3G4 RPS2P35-201ENST00000443417 897 ntBASIC32.99■■■□□ 2.87
SHROOM1Q2M3G4 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC32.99■■■□□ 2.87
SHROOM1Q2M3G4 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
SHROOM1Q2M3G4 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC32.95■■■□□ 2.87
SHROOM1Q2M3G4 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC32.94■■■□□ 2.86
SHROOM1Q2M3G4 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC32.94■■■□□ 2.86
SHROOM1Q2M3G4 AL391121.1-201ENST00000607967 1349 ntBASIC32.91■■■□□ 2.86
SHROOM1Q2M3G4 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
SHROOM1Q2M3G4 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
SHROOM1Q2M3G4 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
SHROOM1Q2M3G4 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
SHROOM1Q2M3G4 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC32.87■■■□□ 2.85
SHROOM1Q2M3G4 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
SHROOM1Q2M3G4 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC32.81■■■□□ 2.84
SHROOM1Q2M3G4 NRG1-221ENST00000614767 762 ntTSL 5 BASIC32.78■■■□□ 2.84
SHROOM1Q2M3G4 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC32.76■■■□□ 2.84
SHROOM1Q2M3G4 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC32.75■■■□□ 2.83
SHROOM1Q2M3G4 AL162393.1-201ENST00000437852 946 ntBASIC32.73■■■□□ 2.83
SHROOM1Q2M3G4 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC32.73■■■□□ 2.83
SHROOM1Q2M3G4 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
SHROOM1Q2M3G4 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
SHROOM1Q2M3G4 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
SHROOM1Q2M3G4 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
SHROOM1Q2M3G4 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
SHROOM1Q2M3G4 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
SHROOM1Q2M3G4 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC32.67■■■□□ 2.82
SHROOM1Q2M3G4 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC32.67■■■□□ 2.82
SHROOM1Q2M3G4 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC32.66■■■□□ 2.82
SHROOM1Q2M3G4 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC32.65■■■□□ 2.82
SHROOM1Q2M3G4 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
SHROOM1Q2M3G4 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC32.63■■■□□ 2.81
SHROOM1Q2M3G4 EBPL-202ENST00000378268 680 ntTSL 3 BASIC32.63■■■□□ 2.81
SHROOM1Q2M3G4 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC32.63■■■□□ 2.81
SHROOM1Q2M3G4 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
SHROOM1Q2M3G4 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC32.61■■■□□ 2.81
SHROOM1Q2M3G4 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
SHROOM1Q2M3G4 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
SHROOM1Q2M3G4 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
SHROOM1Q2M3G4 HNRNPLP2-201ENST00000568980 1570 ntBASIC32.53■■■□□ 2.8
SHROOM1Q2M3G4 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
SHROOM1Q2M3G4 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC32.53■■■□□ 2.8
SHROOM1Q2M3G4 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
SHROOM1Q2M3G4 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC32.52■■■□□ 2.8
SHROOM1Q2M3G4 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC32.52■■■□□ 2.8
SHROOM1Q2M3G4 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
SHROOM1Q2M3G4 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC32.51■■■□□ 2.8
SHROOM1Q2M3G4 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC32.5■■■□□ 2.79
SHROOM1Q2M3G4 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
SHROOM1Q2M3G4 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
SHROOM1Q2M3G4 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC32.5■■■□□ 2.79
SHROOM1Q2M3G4 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
SHROOM1Q2M3G4 AP006261.1-201ENST00000584783 668 ntBASIC32.48■■■□□ 2.79
SHROOM1Q2M3G4 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
SHROOM1Q2M3G4 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
SHROOM1Q2M3G4 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
SHROOM1Q2M3G4 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
SHROOM1Q2M3G4 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC32.45■■■□□ 2.79
SHROOM1Q2M3G4 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
SHROOM1Q2M3G4 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
SHROOM1Q2M3G4 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC32.43■■■□□ 2.78
SHROOM1Q2M3G4 DUX4L28-201ENST00000623687 678 ntBASIC32.4■■■□□ 2.78
SHROOM1Q2M3G4 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
SHROOM1Q2M3G4 MIR762-201ENST00000390236 83 ntBASIC32.37■■■□□ 2.77
SHROOM1Q2M3G4 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC32.35■■■□□ 2.77
SHROOM1Q2M3G4 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
SHROOM1Q2M3G4 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC32.35■■■□□ 2.77
SHROOM1Q2M3G4 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC32.35■■■□□ 2.77
SHROOM1Q2M3G4 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
SHROOM1Q2M3G4 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC32.34■■■□□ 2.77
SHROOM1Q2M3G4 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC32.32■■■□□ 2.76
SHROOM1Q2M3G4 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC32.31■■■□□ 2.76
SHROOM1Q2M3G4 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC32.31■■■□□ 2.76
SHROOM1Q2M3G4 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
SHROOM1Q2M3G4 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC32.31■■■□□ 2.76
SHROOM1Q2M3G4 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
SHROOM1Q2M3G4 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
SHROOM1Q2M3G4 AC087741.3-201ENST00000624270 1347 ntBASIC32.29■■■□□ 2.76
SHROOM1Q2M3G4 WASH5P-204ENST00000632292 975 ntBASIC32.29■■■□□ 2.76
SHROOM1Q2M3G4 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC32.28■■■□□ 2.76
SHROOM1Q2M3G4 MIR3665-201ENST00000578708 105 ntBASIC32.28■■■□□ 2.76
SHROOM1Q2M3G4 CHML-205ENST00000638160 705 ntTSL 3 BASIC32.28■■■□□ 2.76
SHROOM1Q2M3G4 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC32.27■■■□□ 2.76
SHROOM1Q2M3G4 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC32.25■■■□□ 2.75
SHROOM1Q2M3G4 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
SHROOM1Q2M3G4 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC32.24■■■□□ 2.75
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms