Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
HIST1H3AP68431 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
HIST1H3AP68431 EBPL-203ENST00000378270 579 ntTSL 2 BASIC24.37■■□□□ 1.49
HIST1H3AP68431 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC24.37■■□□□ 1.49
HIST1H3AP68431 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
HIST1H3AP68431 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
HIST1H3AP68431 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
HIST1H3AP68431 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
HIST1H3AP68431 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
HIST1H3AP68431 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC24.34■■□□□ 1.49
HIST1H3AP68431 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
HIST1H3AP68431 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
HIST1H3AP68431 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC24.31■■□□□ 1.48
HIST1H3AP68431 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
HIST1H3AP68431 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
HIST1H3AP68431 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
HIST1H3AP68431 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC24.27■■□□□ 1.48
HIST1H3AP68431 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC24.26■■□□□ 1.47
HIST1H3AP68431 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
HIST1H3AP68431 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
HIST1H3AP68431 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
HIST1H3AP68431 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
HIST1H3AP68431 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
HIST1H3AP68431 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
HIST1H3AP68431 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC24.21■■□□□ 1.47
HIST1H3AP68431 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
HIST1H3AP68431 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
HIST1H3AP68431 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
HIST1H3AP68431 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
HIST1H3AP68431 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC24.18■■□□□ 1.46
HIST1H3AP68431 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
HIST1H3AP68431 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
HIST1H3AP68431 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC24.16■■□□□ 1.46
HIST1H3AP68431 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC24.15■■□□□ 1.46
HIST1H3AP68431 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
HIST1H3AP68431 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
HIST1H3AP68431 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC24.15■■□□□ 1.46
HIST1H3AP68431 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC24.15■■□□□ 1.46
HIST1H3AP68431 AC120057.4-201ENST00000624722 1615 ntBASIC24.14■■□□□ 1.46
HIST1H3AP68431 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC24.14■■□□□ 1.45
HIST1H3AP68431 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
HIST1H3AP68431 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
HIST1H3AP68431 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC24.14■■□□□ 1.45
HIST1H3AP68431 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC24.13■■□□□ 1.45
HIST1H3AP68431 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
HIST1H3AP68431 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC24.13■■□□□ 1.45
HIST1H3AP68431 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
HIST1H3AP68431 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
HIST1H3AP68431 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
HIST1H3AP68431 ST7-205ENST00000393446 2114 ntTSL 5 BASIC24.12■■□□□ 1.45
HIST1H3AP68431 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
HIST1H3AP68431 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
HIST1H3AP68431 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
HIST1H3AP68431 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
HIST1H3AP68431 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC24.08■■□□□ 1.45
HIST1H3AP68431 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
HIST1H3AP68431 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
HIST1H3AP68431 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
HIST1H3AP68431 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
HIST1H3AP68431 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
HIST1H3AP68431 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC24.05■■□□□ 1.44
HIST1H3AP68431 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
HIST1H3AP68431 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
HIST1H3AP68431 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
HIST1H3AP68431 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC24.04■■□□□ 1.44
HIST1H3AP68431 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
HIST1H3AP68431 ST7-202ENST00000323984 2142 ntTSL 5 BASIC24.04■■□□□ 1.44
HIST1H3AP68431 ST7-207ENST00000393449 2127 ntTSL 5 BASIC24.04■■□□□ 1.44
HIST1H3AP68431 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC24.02■■□□□ 1.44
HIST1H3AP68431 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC24.02■■□□□ 1.44
HIST1H3AP68431 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
HIST1H3AP68431 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC23.99■■□□□ 1.43
HIST1H3AP68431 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC23.98■■□□□ 1.43
HIST1H3AP68431 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
HIST1H3AP68431 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
HIST1H3AP68431 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
HIST1H3AP68431 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC23.95■■□□□ 1.42
HIST1H3AP68431 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
HIST1H3AP68431 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
HIST1H3AP68431 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
HIST1H3AP68431 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC23.93■■□□□ 1.42
HIST1H3AP68431 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
HIST1H3AP68431 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
HIST1H3AP68431 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
HIST1H3AP68431 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
HIST1H3AP68431 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
HIST1H3AP68431 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
HIST1H3AP68431 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
HIST1H3AP68431 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC23.87■■□□□ 1.41
HIST1H3AP68431 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
HIST1H3AP68431 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
HIST1H3AP68431 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
HIST1H3AP68431 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
HIST1H3AP68431 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC23.83■■□□□ 1.41
HIST1H3AP68431 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
HIST1H3AP68431 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
HIST1H3AP68431 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
HIST1H3AP68431 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC23.81■■□□□ 1.4
HIST1H3AP68431 KLF16-203ENST00000592313 508 ntTSL 3 BASIC23.81■■□□□ 1.4
HIST1H3AP68431 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms