Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC31.66■■■□□ 2.66
CLCN1P35523 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CLCN1P35523 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC31.64■■■□□ 2.66
CLCN1P35523 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
CLCN1P35523 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC31.64■■■□□ 2.66
CLCN1P35523 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.63■■■□□ 2.65
CLCN1P35523 AC015813.7-201ENST00000623294 581 ntBASIC31.62■■■□□ 2.65
CLCN1P35523 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CLCN1P35523 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
CLCN1P35523 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.65
CLCN1P35523 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CLCN1P35523 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CLCN1P35523 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC31.55■■■□□ 2.64
CLCN1P35523 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CLCN1P35523 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CLCN1P35523 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
CLCN1P35523 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CLCN1P35523 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
CLCN1P35523 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC31.46■■■□□ 2.63
CLCN1P35523 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC31.44■■■□□ 2.62
CLCN1P35523 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CLCN1P35523 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC31.44■■■□□ 2.62
CLCN1P35523 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
CLCN1P35523 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
CLCN1P35523 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC31.42■■■□□ 2.62
CLCN1P35523 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CLCN1P35523 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC31.39■■■□□ 2.62
CLCN1P35523 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC31.38■■■□□ 2.61
CLCN1P35523 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CLCN1P35523 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
CLCN1P35523 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
CLCN1P35523 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC31.3■■■□□ 2.6
CLCN1P35523 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
CLCN1P35523 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC31.28■■■□□ 2.6
CLCN1P35523 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CLCN1P35523 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CLCN1P35523 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
CLCN1P35523 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
CLCN1P35523 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CLCN1P35523 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
CLCN1P35523 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC31.19■■■□□ 2.58
CLCN1P35523 AC135731.1-201ENST00000569415 2548 ntBASIC31.17■■■□□ 2.58
CLCN1P35523 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CLCN1P35523 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CLCN1P35523 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC31.15■■■□□ 2.58
CLCN1P35523 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC31.14■■■□□ 2.58
CLCN1P35523 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC31.13■■■□□ 2.57
CLCN1P35523 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CLCN1P35523 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC31.13■■■□□ 2.57
CLCN1P35523 AC145285.7-201ENST00000614819 1539 ntBASIC31.13■■■□□ 2.57
CLCN1P35523 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CLCN1P35523 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CLCN1P35523 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC31.09■■■□□ 2.57
CLCN1P35523 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CLCN1P35523 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CLCN1P35523 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.57
CLCN1P35523 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
CLCN1P35523 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC31.06■■■□□ 2.56
CLCN1P35523 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CLCN1P35523 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CLCN1P35523 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC31.05■■■□□ 2.56
CLCN1P35523 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CLCN1P35523 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC31.04■■■□□ 2.56
CLCN1P35523 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CLCN1P35523 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CLCN1P35523 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CLCN1P35523 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CLCN1P35523 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CLCN1P35523 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CLCN1P35523 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CLCN1P35523 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC30.98■■■□□ 2.55
CLCN1P35523 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
CLCN1P35523 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
CLCN1P35523 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC30.97■■■□□ 2.55
CLCN1P35523 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC30.96■■■□□ 2.55
CLCN1P35523 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC30.96■■■□□ 2.55
CLCN1P35523 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
CLCN1P35523 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
CLCN1P35523 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
CLCN1P35523 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC30.94■■■□□ 2.54
CLCN1P35523 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.94■■■□□ 2.54
CLCN1P35523 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC30.93■■■□□ 2.54
CLCN1P35523 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC30.92■■■□□ 2.54
CLCN1P35523 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CLCN1P35523 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CLCN1P35523 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CLCN1P35523 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CLCN1P35523 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC30.9■■■□□ 2.54
CLCN1P35523 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CLCN1P35523 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC30.9■■■□□ 2.54
CLCN1P35523 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
CLCN1P35523 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC30.88■■■□□ 2.53
CLCN1P35523 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CLCN1P35523 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CLCN1P35523 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC30.87■■■□□ 2.53
CLCN1P35523 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC30.86■■■□□ 2.53
CLCN1P35523 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC30.86■■■□□ 2.53
CLCN1P35523 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CLCN1P35523 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CLCN1P35523 AC006077.2-201ENST00000623591 457 ntBASIC30.85■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 354.3 ms