Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC31.66■■■□□ 2.66
CLCN1P35523 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CLCN1P35523 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC31.64■■■□□ 2.66
CLCN1P35523 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
CLCN1P35523 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC31.64■■■□□ 2.66
CLCN1P35523 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.63■■■□□ 2.65
CLCN1P35523 AC015813.7-201ENST00000623294 581 ntBASIC31.62■■■□□ 2.65
CLCN1P35523 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CLCN1P35523 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
CLCN1P35523 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.65
CLCN1P35523 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CLCN1P35523 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CLCN1P35523 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC31.55■■■□□ 2.64
CLCN1P35523 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CLCN1P35523 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CLCN1P35523 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
CLCN1P35523 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CLCN1P35523 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
CLCN1P35523 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC31.46■■■□□ 2.63
CLCN1P35523 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC31.44■■■□□ 2.62
CLCN1P35523 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CLCN1P35523 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC31.44■■■□□ 2.62
CLCN1P35523 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
CLCN1P35523 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
CLCN1P35523 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC31.42■■■□□ 2.62
CLCN1P35523 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CLCN1P35523 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC31.39■■■□□ 2.62
CLCN1P35523 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC31.38■■■□□ 2.61
CLCN1P35523 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CLCN1P35523 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
CLCN1P35523 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
CLCN1P35523 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC31.3■■■□□ 2.6
CLCN1P35523 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
CLCN1P35523 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC31.28■■■□□ 2.6
CLCN1P35523 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CLCN1P35523 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CLCN1P35523 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
CLCN1P35523 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
CLCN1P35523 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CLCN1P35523 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
CLCN1P35523 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC31.19■■■□□ 2.58
CLCN1P35523 AC135731.1-201ENST00000569415 2548 ntBASIC31.17■■■□□ 2.58
CLCN1P35523 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CLCN1P35523 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CLCN1P35523 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC31.15■■■□□ 2.58
CLCN1P35523 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC31.14■■■□□ 2.58
CLCN1P35523 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC31.13■■■□□ 2.57
CLCN1P35523 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CLCN1P35523 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC31.13■■■□□ 2.57
CLCN1P35523 AC145285.7-201ENST00000614819 1539 ntBASIC31.13■■■□□ 2.57
CLCN1P35523 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CLCN1P35523 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CLCN1P35523 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC31.09■■■□□ 2.57
CLCN1P35523 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CLCN1P35523 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CLCN1P35523 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.57
CLCN1P35523 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
CLCN1P35523 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC31.06■■■□□ 2.56
CLCN1P35523 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CLCN1P35523 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CLCN1P35523 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC31.05■■■□□ 2.56
CLCN1P35523 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CLCN1P35523 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC31.04■■■□□ 2.56
CLCN1P35523 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CLCN1P35523 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CLCN1P35523 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CLCN1P35523 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CLCN1P35523 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CLCN1P35523 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CLCN1P35523 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CLCN1P35523 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC30.98■■■□□ 2.55
CLCN1P35523 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
CLCN1P35523 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
CLCN1P35523 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC30.97■■■□□ 2.55
CLCN1P35523 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC30.96■■■□□ 2.55
CLCN1P35523 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC30.96■■■□□ 2.55
CLCN1P35523 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
CLCN1P35523 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
CLCN1P35523 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
CLCN1P35523 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC30.94■■■□□ 2.54
CLCN1P35523 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.94■■■□□ 2.54
CLCN1P35523 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC30.93■■■□□ 2.54
CLCN1P35523 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC30.92■■■□□ 2.54
CLCN1P35523 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CLCN1P35523 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CLCN1P35523 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CLCN1P35523 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CLCN1P35523 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC30.9■■■□□ 2.54
CLCN1P35523 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CLCN1P35523 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC30.9■■■□□ 2.54
CLCN1P35523 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
CLCN1P35523 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC30.88■■■□□ 2.53
CLCN1P35523 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CLCN1P35523 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CLCN1P35523 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC30.87■■■□□ 2.53
CLCN1P35523 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC30.86■■■□□ 2.53
CLCN1P35523 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC30.86■■■□□ 2.53
CLCN1P35523 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CLCN1P35523 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CLCN1P35523 AC006077.2-201ENST00000623591 457 ntBASIC30.85■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms