Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
UBCP0CG48 AC006077.2-201ENST00000623591 457 ntBASIC24.26■■□□□ 1.47
UBCP0CG48 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
UBCP0CG48 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
UBCP0CG48 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
UBCP0CG48 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
UBCP0CG48 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
UBCP0CG48 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC24.22■■□□□ 1.47
UBCP0CG48 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
UBCP0CG48 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
UBCP0CG48 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC24.21■■□□□ 1.47
UBCP0CG48 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC24.21■■□□□ 1.47
UBCP0CG48 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
UBCP0CG48 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
UBCP0CG48 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
UBCP0CG48 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
UBCP0CG48 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
UBCP0CG48 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
UBCP0CG48 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
UBCP0CG48 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
UBCP0CG48 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC24.16■■□□□ 1.46
UBCP0CG48 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC24.15■■□□□ 1.46
UBCP0CG48 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
UBCP0CG48 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
UBCP0CG48 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC24.13■■□□□ 1.45
UBCP0CG48 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC24.13■■□□□ 1.45
UBCP0CG48 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
UBCP0CG48 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
UBCP0CG48 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
UBCP0CG48 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC24.11■■□□□ 1.45
UBCP0CG48 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC24.1■■□□□ 1.45
UBCP0CG48 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
UBCP0CG48 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC24.09■■□□□ 1.45
UBCP0CG48 AC120057.4-201ENST00000624722 1615 ntBASIC24.09■■□□□ 1.45
UBCP0CG48 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
UBCP0CG48 MVK-208ENST00000539696 608 ntTSL 5 BASIC24.08■■□□□ 1.45
UBCP0CG48 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
UBCP0CG48 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
UBCP0CG48 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
UBCP0CG48 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
UBCP0CG48 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC24.06■■□□□ 1.44
UBCP0CG48 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
UBCP0CG48 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
UBCP0CG48 ZNRF2P1-201ENST00000441407 443 ntBASIC24.04■■□□□ 1.44
UBCP0CG48 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
UBCP0CG48 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC24.04■■□□□ 1.44
UBCP0CG48 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
UBCP0CG48 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
UBCP0CG48 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC24.02■■□□□ 1.44
UBCP0CG48 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
UBCP0CG48 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
UBCP0CG48 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
UBCP0CG48 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC24■■□□□ 1.43
UBCP0CG48 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC23.99■■□□□ 1.43
UBCP0CG48 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
UBCP0CG48 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
UBCP0CG48 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
UBCP0CG48 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
UBCP0CG48 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
UBCP0CG48 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC23.92■■□□□ 1.42
UBCP0CG48 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
UBCP0CG48 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
UBCP0CG48 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
UBCP0CG48 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC23.9■■□□□ 1.42
UBCP0CG48 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC23.9■■□□□ 1.42
UBCP0CG48 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
UBCP0CG48 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
UBCP0CG48 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC23.89■■□□□ 1.41
UBCP0CG48 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC23.87■■□□□ 1.41
UBCP0CG48 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC23.87■■□□□ 1.41
UBCP0CG48 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
UBCP0CG48 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
UBCP0CG48 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC23.85■■□□□ 1.41
UBCP0CG48 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
UBCP0CG48 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
UBCP0CG48 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
UBCP0CG48 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
UBCP0CG48 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
UBCP0CG48 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
UBCP0CG48 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC23.81■■□□□ 1.4
UBCP0CG48 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
UBCP0CG48 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
UBCP0CG48 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
UBCP0CG48 AL161658.1-201ENST00000623641 1967 ntBASIC23.8■■□□□ 1.4
UBCP0CG48 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC23.79■■□□□ 1.4
UBCP0CG48 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
UBCP0CG48 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
UBCP0CG48 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC23.77■■□□□ 1.4
UBCP0CG48 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
UBCP0CG48 EBPL-203ENST00000378270 579 ntTSL 2 BASIC23.74■■□□□ 1.39
UBCP0CG48 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
UBCP0CG48 DYNLL1-208ENST00000550178 581 ntBASIC23.74■■□□□ 1.39
UBCP0CG48 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
UBCP0CG48 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC23.73■■□□□ 1.39
UBCP0CG48 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
UBCP0CG48 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC23.72■■□□□ 1.39
UBCP0CG48 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
UBCP0CG48 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
UBCP0CG48 ABCB10P1-201ENST00000614297 2181 ntBASIC23.7■■□□□ 1.38
UBCP0CG48 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms