Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
CYP3A4P08684 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CYP3A4P08684 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC31.63■■■□□ 2.65
CYP3A4P08684 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
CYP3A4P08684 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC31.6■■■□□ 2.65
CYP3A4P08684 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC31.59■■■□□ 2.65
CYP3A4P08684 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC31.58■■■□□ 2.65
CYP3A4P08684 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
CYP3A4P08684 SETD8P1-201ENST00000623146 1180 ntBASIC31.56■■■□□ 2.64
CYP3A4P08684 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CYP3A4P08684 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC31.52■■■□□ 2.64
CYP3A4P08684 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
CYP3A4P08684 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC31.52■■■□□ 2.64
CYP3A4P08684 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
CYP3A4P08684 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CYP3A4P08684 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CYP3A4P08684 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CYP3A4P08684 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC31.48■■■□□ 2.63
CYP3A4P08684 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
CYP3A4P08684 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC31.45■■■□□ 2.63
CYP3A4P08684 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC31.45■■■□□ 2.63
CYP3A4P08684 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CYP3A4P08684 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC31.44■■■□□ 2.62
CYP3A4P08684 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC31.43■■■□□ 2.62
CYP3A4P08684 AC136428.2-201ENST00000563187 214 ntBASIC31.43■■■□□ 2.62
CYP3A4P08684 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC31.42■■■□□ 2.62
CYP3A4P08684 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC31.42■■■□□ 2.62
CYP3A4P08684 AL133380.1-201ENST00000506013 324 ntBASIC31.41■■■□□ 2.62
CYP3A4P08684 AC097358.2-201ENST00000607541 1159 ntBASIC31.41■■■□□ 2.62
CYP3A4P08684 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
CYP3A4P08684 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
CYP3A4P08684 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC31.38■■■□□ 2.61
CYP3A4P08684 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CYP3A4P08684 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CYP3A4P08684 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CYP3A4P08684 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
CYP3A4P08684 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC31.36■■■□□ 2.61
CYP3A4P08684 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CYP3A4P08684 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
CYP3A4P08684 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC31.33■■■□□ 2.61
CYP3A4P08684 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC31.32■■■□□ 2.6
CYP3A4P08684 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC31.32■■■□□ 2.6
CYP3A4P08684 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC31.32■■■□□ 2.6
CYP3A4P08684 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC31.32■■■□□ 2.6
CYP3A4P08684 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CYP3A4P08684 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CYP3A4P08684 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC31.3■■■□□ 2.6
CYP3A4P08684 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
CYP3A4P08684 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
CYP3A4P08684 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC31.28■■■□□ 2.6
CYP3A4P08684 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC31.28■■■□□ 2.6
CYP3A4P08684 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC31.28■■■□□ 2.6
CYP3A4P08684 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
CYP3A4P08684 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC31.25■■■□□ 2.59
CYP3A4P08684 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
CYP3A4P08684 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
CYP3A4P08684 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CYP3A4P08684 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC31.23■■■□□ 2.59
CYP3A4P08684 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC31.23■■■□□ 2.59
CYP3A4P08684 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC31.22■■■□□ 2.59
CYP3A4P08684 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CYP3A4P08684 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC31.21■■■□□ 2.59
CYP3A4P08684 CAHM-201ENST00000604200 896 ntBASIC31.2■■■□□ 2.59
CYP3A4P08684 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CYP3A4P08684 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CYP3A4P08684 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CYP3A4P08684 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CYP3A4P08684 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
CYP3A4P08684 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC31.13■■■□□ 2.57
CYP3A4P08684 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
CYP3A4P08684 SUZ12P1-203ENST00000578195 985 ntBASIC31.13■■■□□ 2.57
CYP3A4P08684 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC31.12■■■□□ 2.57
CYP3A4P08684 AL391121.1-201ENST00000607967 1349 ntBASIC31.12■■■□□ 2.57
CYP3A4P08684 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CYP3A4P08684 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CYP3A4P08684 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CYP3A4P08684 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC31.11■■■□□ 2.57
CYP3A4P08684 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CYP3A4P08684 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CYP3A4P08684 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC31.09■■■□□ 2.57
CYP3A4P08684 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
CYP3A4P08684 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CYP3A4P08684 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC31.04■■■□□ 2.56
CYP3A4P08684 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
CYP3A4P08684 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CYP3A4P08684 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CYP3A4P08684 WASH5P-204ENST00000632292 975 ntBASIC31.02■■■□□ 2.56
CYP3A4P08684 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
CYP3A4P08684 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC31.01■■■□□ 2.55
CYP3A4P08684 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CYP3A4P08684 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC30.99■■■□□ 2.55
CYP3A4P08684 AC120057.4-201ENST00000624722 1615 ntBASIC30.99■■■□□ 2.55
CYP3A4P08684 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CYP3A4P08684 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CYP3A4P08684 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC30.98■■■□□ 2.55
CYP3A4P08684 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC30.96■■■□□ 2.55
CYP3A4P08684 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30.95■■■□□ 2.55
CYP3A4P08684 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC30.95■■■□□ 2.55
CYP3A4P08684 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.95■■■□□ 2.55
CYP3A4P08684 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC30.95■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms