Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CPNE3O75131 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC26.58■■□□□ 1.85
CPNE3O75131 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
CPNE3O75131 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CPNE3O75131 SUZ12P1-203ENST00000578195 985 ntBASIC26.54■■□□□ 1.84
CPNE3O75131 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CPNE3O75131 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CPNE3O75131 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC26.52■■□□□ 1.84
CPNE3O75131 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
CPNE3O75131 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC26.51■■□□□ 1.83
CPNE3O75131 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.51■■□□□ 1.83
CPNE3O75131 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC26.51■■□□□ 1.83
CPNE3O75131 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CPNE3O75131 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC26.49■■□□□ 1.83
CPNE3O75131 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CPNE3O75131 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
CPNE3O75131 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CPNE3O75131 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.46■■□□□ 1.83
CPNE3O75131 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
CPNE3O75131 AL133380.1-201ENST00000506013 324 ntBASIC26.45■■□□□ 1.82
CPNE3O75131 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CPNE3O75131 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CPNE3O75131 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CPNE3O75131 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CPNE3O75131 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CPNE3O75131 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC26.42■■□□□ 1.82
CPNE3O75131 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CPNE3O75131 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CPNE3O75131 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CPNE3O75131 CAHM-201ENST00000604200 896 ntBASIC26.39■■□□□ 1.82
CPNE3O75131 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC26.39■■□□□ 1.81
CPNE3O75131 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CPNE3O75131 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
CPNE3O75131 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
CPNE3O75131 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CPNE3O75131 AL391121.1-201ENST00000607967 1349 ntBASIC26.35■■□□□ 1.81
CPNE3O75131 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.34■■□□□ 1.81
CPNE3O75131 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.33■■□□□ 1.81
CPNE3O75131 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CPNE3O75131 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
CPNE3O75131 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
CPNE3O75131 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CPNE3O75131 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC26.29■■□□□ 1.8
CPNE3O75131 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CPNE3O75131 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CPNE3O75131 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.28■■□□□ 1.8
CPNE3O75131 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CPNE3O75131 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CPNE3O75131 RPS2P35-201ENST00000443417 897 ntBASIC26.22■■□□□ 1.79
CPNE3O75131 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
CPNE3O75131 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.21■■□□□ 1.79
CPNE3O75131 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CPNE3O75131 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CPNE3O75131 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
CPNE3O75131 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
CPNE3O75131 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CPNE3O75131 AP006261.1-201ENST00000584783 668 ntBASIC26.16■■□□□ 1.78
CPNE3O75131 HNRNPLP2-201ENST00000568980 1570 ntBASIC26.13■■□□□ 1.77
CPNE3O75131 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CPNE3O75131 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CPNE3O75131 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CPNE3O75131 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
CPNE3O75131 AL162393.1-201ENST00000437852 946 ntBASIC26.1■■□□□ 1.77
CPNE3O75131 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CPNE3O75131 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.08■■□□□ 1.77
CPNE3O75131 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC26.07■■□□□ 1.76
CPNE3O75131 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.07■■□□□ 1.76
CPNE3O75131 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CPNE3O75131 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CPNE3O75131 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.06■■□□□ 1.76
CPNE3O75131 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
CPNE3O75131 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC26.05■■□□□ 1.76
CPNE3O75131 NRG1-221ENST00000614767 762 ntTSL 5 BASIC26.04■■□□□ 1.76
CPNE3O75131 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CPNE3O75131 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CPNE3O75131 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CPNE3O75131 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CPNE3O75131 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC26.02■■□□□ 1.76
CPNE3O75131 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CPNE3O75131 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC26■■□□□ 1.75
CPNE3O75131 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC26■■□□□ 1.75
CPNE3O75131 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CPNE3O75131 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC25.99■■□□□ 1.75
CPNE3O75131 MIR3665-201ENST00000578708 105 ntBASIC25.99■■□□□ 1.75
CPNE3O75131 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
CPNE3O75131 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
CPNE3O75131 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CPNE3O75131 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CPNE3O75131 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CPNE3O75131 CHML-205ENST00000638160 705 ntTSL 3 BASIC25.95■■□□□ 1.74
CPNE3O75131 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
CPNE3O75131 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
CPNE3O75131 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CPNE3O75131 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC25.94■■□□□ 1.74
CPNE3O75131 WASH5P-204ENST00000632292 975 ntBASIC25.94■■□□□ 1.74
CPNE3O75131 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC25.93■■□□□ 1.74
CPNE3O75131 MIR762-201ENST00000390236 83 ntBASIC25.93■■□□□ 1.74
CPNE3O75131 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
CPNE3O75131 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CPNE3O75131 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms