Protein–RNA interactions for Protein: O43639

NCK2, Cytoplasmic protein NCK2, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK2O43639 AC145285.7-201ENST00000614819 1539 ntBASIC30.65■■■□□ 2.5
NCK2O43639 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC30.63■■■□□ 2.49
NCK2O43639 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC30.62■■■□□ 2.49
NCK2O43639 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
NCK2O43639 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC30.61■■■□□ 2.49
NCK2O43639 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
NCK2O43639 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
NCK2O43639 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC30.6■■■□□ 2.49
NCK2O43639 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC30.6■■■□□ 2.49
NCK2O43639 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC30.58■■■□□ 2.49
NCK2O43639 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
NCK2O43639 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC30.58■■■□□ 2.49
NCK2O43639 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
NCK2O43639 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
NCK2O43639 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
NCK2O43639 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC30.54■■■□□ 2.48
NCK2O43639 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.54■■■□□ 2.48
NCK2O43639 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.54■■■□□ 2.48
NCK2O43639 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC30.54■■■□□ 2.48
NCK2O43639 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC30.51■■■□□ 2.47
NCK2O43639 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC30.5■■■□□ 2.47
NCK2O43639 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.49■■■□□ 2.47
NCK2O43639 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
NCK2O43639 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC30.47■■■□□ 2.47
NCK2O43639 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
NCK2O43639 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC30.46■■■□□ 2.47
NCK2O43639 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
NCK2O43639 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
NCK2O43639 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
NCK2O43639 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC30.4■■■□□ 2.46
NCK2O43639 AP006261.1-201ENST00000584783 668 ntBASIC30.38■■■□□ 2.45
NCK2O43639 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
NCK2O43639 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
NCK2O43639 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC30.36■■■□□ 2.45
NCK2O43639 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
NCK2O43639 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
NCK2O43639 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.35■■■□□ 2.45
NCK2O43639 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.35■■■□□ 2.45
NCK2O43639 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
NCK2O43639 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
NCK2O43639 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
NCK2O43639 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
NCK2O43639 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
NCK2O43639 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC30.32■■■□□ 2.44
NCK2O43639 AL162393.1-201ENST00000437852 946 ntBASIC30.29■■■□□ 2.44
NCK2O43639 CAHM-201ENST00000604200 896 ntBASIC30.27■■■□□ 2.44
NCK2O43639 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
NCK2O43639 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC30.27■■■□□ 2.44
NCK2O43639 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
NCK2O43639 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
NCK2O43639 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
NCK2O43639 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC30.23■■■□□ 2.43
NCK2O43639 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
NCK2O43639 MVK-208ENST00000539696 608 ntTSL 5 BASIC30.22■■■□□ 2.43
NCK2O43639 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC30.21■■■□□ 2.43
NCK2O43639 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC30.21■■■□□ 2.43
NCK2O43639 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
NCK2O43639 NRG1-221ENST00000614767 762 ntTSL 5 BASIC30.19■■■□□ 2.42
NCK2O43639 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
NCK2O43639 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC30.18■■■□□ 2.42
NCK2O43639 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
NCK2O43639 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
NCK2O43639 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC30.17■■■□□ 2.42
NCK2O43639 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.17■■■□□ 2.42
NCK2O43639 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
NCK2O43639 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC30.16■■■□□ 2.42
NCK2O43639 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC30.15■■■□□ 2.42
NCK2O43639 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
NCK2O43639 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
NCK2O43639 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC30.14■■■□□ 2.42
NCK2O43639 AL391121.1-201ENST00000607967 1349 ntBASIC30.14■■■□□ 2.42
NCK2O43639 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
NCK2O43639 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
NCK2O43639 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
NCK2O43639 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC30.11■■■□□ 2.41
NCK2O43639 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
NCK2O43639 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
NCK2O43639 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC30.08■■■□□ 2.41
NCK2O43639 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC30.08■■■□□ 2.41
NCK2O43639 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
NCK2O43639 HNRNPLP2-201ENST00000568980 1570 ntBASIC30.07■■■□□ 2.4
NCK2O43639 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC30.07■■■□□ 2.4
NCK2O43639 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC30.07■■■□□ 2.4
NCK2O43639 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC30.06■■■□□ 2.4
NCK2O43639 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC30.06■■■□□ 2.4
NCK2O43639 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
NCK2O43639 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
NCK2O43639 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
NCK2O43639 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC30.03■■■□□ 2.4
NCK2O43639 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
NCK2O43639 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC30.02■■■□□ 2.4
NCK2O43639 MIR3665-201ENST00000578708 105 ntBASIC30.02■■■□□ 2.4
NCK2O43639 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
NCK2O43639 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
NCK2O43639 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
NCK2O43639 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC30.01■■■□□ 2.39
NCK2O43639 ABHD17AP4-201ENST00000411545 909 ntBASIC30■■■□□ 2.39
NCK2O43639 MIR7108-201ENST00000614319 87 ntBASIC30■■■□□ 2.39
NCK2O43639 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC30■■■□□ 2.39
NCK2O43639 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC29.99■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms