Protein–RNA interactions for Protein: O15020

SPTBN2, Spectrin beta chain, non-erythrocytic 2, humanhuman

Predictions only

Length 2,390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2O15020 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC27.76■■■□□ 2.03
SPTBN2O15020 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
SPTBN2O15020 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC27.74■■■□□ 2.03
SPTBN2O15020 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
SPTBN2O15020 AC087741.3-201ENST00000624270 1347 ntBASIC27.73■■■□□ 2.03
SPTBN2O15020 RPS2-202ENST00000526522 924 ntTSL 2 BASIC27.72■■■□□ 2.03
SPTBN2O15020 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC27.72■■■□□ 2.03
SPTBN2O15020 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC27.72■■■□□ 2.03
SPTBN2O15020 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
SPTBN2O15020 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC27.67■■■□□ 2.02
SPTBN2O15020 AC044849.2-201ENST00000606596 710 ntBASIC27.67■■■□□ 2.02
SPTBN2O15020 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC27.66■■■□□ 2.02
SPTBN2O15020 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC27.64■■■□□ 2.02
SPTBN2O15020 MIR4449-201ENST00000578365 66 ntBASIC27.63■■■□□ 2.01
SPTBN2O15020 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC27.62■■■□□ 2.01
SPTBN2O15020 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC27.61■■■□□ 2.01
SPTBN2O15020 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC27.61■■■□□ 2.01
SPTBN2O15020 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC27.58■■■□□ 2.01
SPTBN2O15020 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC27.58■■■□□ 2.01
SPTBN2O15020 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC27.58■■■□□ 2.01
SPTBN2O15020 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC27.58■■■□□ 2.01
SPTBN2O15020 DUX4L28-201ENST00000623687 678 ntBASIC27.58■■■□□ 2.01
SPTBN2O15020 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC27.57■■■□□ 2
SPTBN2O15020 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC27.55■■■□□ 2
SPTBN2O15020 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC27.55■■■□□ 2
SPTBN2O15020 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC27.52■■■□□ 2
SPTBN2O15020 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
SPTBN2O15020 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SPTBN2O15020 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SPTBN2O15020 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC27.49■■□□□ 1.99
SPTBN2O15020 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
SPTBN2O15020 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC27.47■■□□□ 1.99
SPTBN2O15020 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC27.46■■□□□ 1.99
SPTBN2O15020 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC27.45■■□□□ 1.98
SPTBN2O15020 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC27.45■■□□□ 1.98
SPTBN2O15020 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC27.44■■□□□ 1.98
SPTBN2O15020 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SPTBN2O15020 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
SPTBN2O15020 HSD17B1P1-201ENST00000590052 955 ntBASIC27.42■■□□□ 1.98
SPTBN2O15020 MIR762-201ENST00000390236 83 ntBASIC27.41■■□□□ 1.98
SPTBN2O15020 CHML-205ENST00000638160 705 ntTSL 3 BASIC27.41■■□□□ 1.98
SPTBN2O15020 AC145285.7-201ENST00000614819 1539 ntBASIC27.37■■□□□ 1.97
SPTBN2O15020 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SPTBN2O15020 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
SPTBN2O15020 AC005559.1-201ENST00000589661 871 ntBASIC27.36■■□□□ 1.97
SPTBN2O15020 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
SPTBN2O15020 BOD1-206ENST00000480951 814 ntTSL 2 BASIC27.36■■□□□ 1.97
SPTBN2O15020 AL133380.1-201ENST00000506013 324 ntBASIC27.36■■□□□ 1.97
SPTBN2O15020 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
SPTBN2O15020 EBPL-202ENST00000378268 680 ntTSL 3 BASIC27.33■■□□□ 1.97
SPTBN2O15020 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
SPTBN2O15020 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SPTBN2O15020 ZNRF2P2-203ENST00000454624 420 ntBASIC27.31■■□□□ 1.96
SPTBN2O15020 HGH1-207ENST00000628266 258 ntTSL 5 BASIC27.31■■□□□ 1.96
SPTBN2O15020 CALM3-209ENST00000597743 577 ntTSL 4 BASIC27.31■■□□□ 1.96
SPTBN2O15020 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SPTBN2O15020 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
SPTBN2O15020 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
SPTBN2O15020 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC27.26■■□□□ 1.95
SPTBN2O15020 MIR639-201ENST00000384974 98 ntBASIC27.23■■□□□ 1.95
SPTBN2O15020 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
SPTBN2O15020 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC27.22■■□□□ 1.95
SPTBN2O15020 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC27.22■■□□□ 1.95
SPTBN2O15020 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC27.21■■□□□ 1.95
SPTBN2O15020 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
SPTBN2O15020 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
SPTBN2O15020 MVK-208ENST00000539696 608 ntTSL 5 BASIC27.17■■□□□ 1.94
SPTBN2O15020 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SPTBN2O15020 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
SPTBN2O15020 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC27.14■■□□□ 1.93
SPTBN2O15020 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC27.13■■□□□ 1.93
SPTBN2O15020 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC27.13■■□□□ 1.93
SPTBN2O15020 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
SPTBN2O15020 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC27.12■■□□□ 1.93
SPTBN2O15020 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC27.11■■□□□ 1.93
SPTBN2O15020 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
SPTBN2O15020 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SPTBN2O15020 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
SPTBN2O15020 BRD4-212ENST00000630599 726 ntTSL 2 BASIC27.09■■□□□ 1.93
SPTBN2O15020 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC27.09■■□□□ 1.93
SPTBN2O15020 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SPTBN2O15020 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
SPTBN2O15020 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
SPTBN2O15020 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
SPTBN2O15020 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
SPTBN2O15020 MACF1-219ENST00000484793 834 ntTSL 2 BASIC27.05■■□□□ 1.92
SPTBN2O15020 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC27.04■■□□□ 1.92
SPTBN2O15020 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC27.03■■□□□ 1.92
SPTBN2O15020 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
SPTBN2O15020 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC27.03■■□□□ 1.92
SPTBN2O15020 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC27.03■■□□□ 1.92
SPTBN2O15020 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC27.02■■□□□ 1.92
SPTBN2O15020 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC27.02■■□□□ 1.92
SPTBN2O15020 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC27.01■■□□□ 1.91
SPTBN2O15020 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
SPTBN2O15020 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC26.99■■□□□ 1.91
SPTBN2O15020 MIR3648-2-201ENST00000581792 180 ntBASIC26.99■■□□□ 1.91
SPTBN2O15020 MIR3648-1-201ENST00000615959 180 ntBASIC26.99■■□□□ 1.91
SPTBN2O15020 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC26.98■■□□□ 1.91
SPTBN2O15020 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.98■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms