Protein–RNA interactions for Protein: O15018

PDZD2, PDZ domain-containing protein 2, humanhuman

Predictions only

Length 2,839 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD2O15018 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PDZD2O15018 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PDZD2O15018 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PDZD2O15018 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC24.32■■□□□ 1.48
PDZD2O15018 DUX4L28-201ENST00000623687 678 ntBASIC24.3■■□□□ 1.48
PDZD2O15018 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC24.3■■□□□ 1.48
PDZD2O15018 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
PDZD2O15018 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC24.28■■□□□ 1.48
PDZD2O15018 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
PDZD2O15018 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC24.25■■□□□ 1.47
PDZD2O15018 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC24.25■■□□□ 1.47
PDZD2O15018 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC24.24■■□□□ 1.47
PDZD2O15018 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
PDZD2O15018 RPS2-202ENST00000526522 924 ntTSL 2 BASIC24.24■■□□□ 1.47
PDZD2O15018 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC24.24■■□□□ 1.47
PDZD2O15018 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC24.23■■□□□ 1.47
PDZD2O15018 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PDZD2O15018 AC145285.7-201ENST00000614819 1539 ntBASIC24.22■■□□□ 1.47
PDZD2O15018 AL133380.1-201ENST00000506013 324 ntBASIC24.2■■□□□ 1.47
PDZD2O15018 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC24.2■■□□□ 1.47
PDZD2O15018 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.47
PDZD2O15018 AC044849.2-201ENST00000606596 710 ntBASIC24.2■■□□□ 1.46
PDZD2O15018 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PDZD2O15018 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PDZD2O15018 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC24.19■■□□□ 1.46
PDZD2O15018 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PDZD2O15018 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PDZD2O15018 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC24.15■■□□□ 1.46
PDZD2O15018 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
PDZD2O15018 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
PDZD2O15018 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PDZD2O15018 EBPL-202ENST00000378268 680 ntTSL 3 BASIC24.14■■□□□ 1.45
PDZD2O15018 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
PDZD2O15018 MIR4449-201ENST00000578365 66 ntBASIC24.11■■□□□ 1.45
PDZD2O15018 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC24.11■■□□□ 1.45
PDZD2O15018 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
PDZD2O15018 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.07■■□□□ 1.44
PDZD2O15018 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.07■■□□□ 1.44
PDZD2O15018 MIR762-201ENST00000390236 83 ntBASIC24.07■■□□□ 1.44
PDZD2O15018 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PDZD2O15018 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC24.07■■□□□ 1.44
PDZD2O15018 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
PDZD2O15018 AC005559.1-201ENST00000589661 871 ntBASIC24.06■■□□□ 1.44
PDZD2O15018 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC24.06■■□□□ 1.44
PDZD2O15018 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC24.06■■□□□ 1.44
PDZD2O15018 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.05■■□□□ 1.44
PDZD2O15018 MVK-208ENST00000539696 608 ntTSL 5 BASIC24.05■■□□□ 1.44
PDZD2O15018 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PDZD2O15018 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PDZD2O15018 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.43
PDZD2O15018 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
PDZD2O15018 ZNRF2P2-203ENST00000454624 420 ntBASIC24.01■■□□□ 1.43
PDZD2O15018 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
PDZD2O15018 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC24■■□□□ 1.43
PDZD2O15018 CHML-205ENST00000638160 705 ntTSL 3 BASIC23.99■■□□□ 1.43
PDZD2O15018 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC23.97■■□□□ 1.43
PDZD2O15018 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC23.97■■□□□ 1.43
PDZD2O15018 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC23.97■■□□□ 1.43
PDZD2O15018 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PDZD2O15018 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
PDZD2O15018 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
PDZD2O15018 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PDZD2O15018 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC23.93■■□□□ 1.42
PDZD2O15018 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
PDZD2O15018 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
PDZD2O15018 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.92■■□□□ 1.42
PDZD2O15018 HSD17B1P1-201ENST00000590052 955 ntBASIC23.91■■□□□ 1.42
PDZD2O15018 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
PDZD2O15018 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PDZD2O15018 BOD1-206ENST00000480951 814 ntTSL 2 BASIC23.9■■□□□ 1.42
PDZD2O15018 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
PDZD2O15018 MIR639-201ENST00000384974 98 ntBASIC23.89■■□□□ 1.41
PDZD2O15018 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.88■■□□□ 1.41
PDZD2O15018 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC23.87■■□□□ 1.41
PDZD2O15018 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDZD2O15018 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PDZD2O15018 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC23.83■■□□□ 1.4
PDZD2O15018 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
PDZD2O15018 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PDZD2O15018 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PDZD2O15018 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PDZD2O15018 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PDZD2O15018 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PDZD2O15018 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
PDZD2O15018 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.79■■□□□ 1.4
PDZD2O15018 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PDZD2O15018 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDZD2O15018 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDZD2O15018 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC23.76■■□□□ 1.39
PDZD2O15018 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.75■■□□□ 1.39
PDZD2O15018 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC23.75■■□□□ 1.39
PDZD2O15018 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC23.74■■□□□ 1.39
PDZD2O15018 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.72■■□□□ 1.39
PDZD2O15018 DENR-202ENST00000455982 1052 ntTSL 5 BASIC23.72■■□□□ 1.39
PDZD2O15018 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.72■■□□□ 1.39
PDZD2O15018 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC23.72■■□□□ 1.39
PDZD2O15018 BRD4-212ENST00000630599 726 ntTSL 2 BASIC23.71■■□□□ 1.39
PDZD2O15018 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC23.71■■□□□ 1.39
PDZD2O15018 MIR3648-2-201ENST00000581792 180 ntBASIC23.7■■□□□ 1.38
PDZD2O15018 MIR3648-1-201ENST00000615959 180 ntBASIC23.7■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms