Protein–RNA interactions for Protein: A4D1U4

LCHN, Protein LCHN, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCHNA4D1U4 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
LCHNA4D1U4 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
LCHNA4D1U4 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
LCHNA4D1U4 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
LCHNA4D1U4 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
LCHNA4D1U4 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
LCHNA4D1U4 AL133380.1-201ENST00000506013 324 ntBASIC30.57■■■□□ 2.48
LCHNA4D1U4 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC30.57■■■□□ 2.48
LCHNA4D1U4 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC30.56■■■□□ 2.48
LCHNA4D1U4 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
LCHNA4D1U4 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
LCHNA4D1U4 HNRNPLP2-201ENST00000568980 1570 ntBASIC30.53■■■□□ 2.48
LCHNA4D1U4 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
LCHNA4D1U4 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC30.52■■■□□ 2.48
LCHNA4D1U4 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
LCHNA4D1U4 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC30.46■■■□□ 2.47
LCHNA4D1U4 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
LCHNA4D1U4 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
LCHNA4D1U4 MIR7108-201ENST00000614319 87 ntBASIC30.44■■■□□ 2.46
LCHNA4D1U4 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC30.43■■■□□ 2.46
LCHNA4D1U4 ABHD17AP4-201ENST00000411545 909 ntBASIC30.42■■■□□ 2.46
LCHNA4D1U4 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC30.41■■■□□ 2.46
LCHNA4D1U4 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30.4■■■□□ 2.46
LCHNA4D1U4 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC30.38■■■□□ 2.45
LCHNA4D1U4 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC30.37■■■□□ 2.45
LCHNA4D1U4 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC30.36■■■□□ 2.45
LCHNA4D1U4 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
LCHNA4D1U4 MIR3665-201ENST00000578708 105 ntBASIC30.35■■■□□ 2.45
LCHNA4D1U4 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC30.34■■■□□ 2.45
LCHNA4D1U4 PVT1-219ENST00000523427 938 ntTSL 3 BASIC30.34■■■□□ 2.45
LCHNA4D1U4 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
LCHNA4D1U4 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
LCHNA4D1U4 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
LCHNA4D1U4 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.32■■■□□ 2.44
LCHNA4D1U4 AC087741.3-201ENST00000624270 1347 ntBASIC30.31■■■□□ 2.44
LCHNA4D1U4 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
LCHNA4D1U4 DUX4L28-201ENST00000623687 678 ntBASIC30.3■■■□□ 2.44
LCHNA4D1U4 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
LCHNA4D1U4 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
LCHNA4D1U4 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
LCHNA4D1U4 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC30.25■■■□□ 2.43
LCHNA4D1U4 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC30.24■■■□□ 2.43
LCHNA4D1U4 MLEC-202ENST00000412616 841 ntTSL 3 BASIC30.22■■■□□ 2.43
LCHNA4D1U4 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC30.22■■■□□ 2.43
LCHNA4D1U4 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
LCHNA4D1U4 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC30.22■■■□□ 2.43
LCHNA4D1U4 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
LCHNA4D1U4 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC30.19■■■□□ 2.42
LCHNA4D1U4 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
LCHNA4D1U4 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
LCHNA4D1U4 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
LCHNA4D1U4 MIR762-201ENST00000390236 83 ntBASIC30.16■■■□□ 2.42
LCHNA4D1U4 MBP-237ENST00000579129 1052 ntTSL 5 BASIC30.16■■■□□ 2.42
LCHNA4D1U4 CHML-205ENST00000638160 705 ntTSL 3 BASIC30.15■■■□□ 2.42
LCHNA4D1U4 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC30.14■■■□□ 2.42
LCHNA4D1U4 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
LCHNA4D1U4 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.13■■■□□ 2.41
LCHNA4D1U4 HLA-V-202ENST00000446817 847 ntBASIC30.13■■■□□ 2.41
LCHNA4D1U4 AC044849.2-201ENST00000606596 710 ntBASIC30.12■■■□□ 2.41
LCHNA4D1U4 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC30.09■■■□□ 2.41
LCHNA4D1U4 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC30.08■■■□□ 2.41
LCHNA4D1U4 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC30.08■■■□□ 2.41
LCHNA4D1U4 AC005559.1-201ENST00000589661 871 ntBASIC30.08■■■□□ 2.41
LCHNA4D1U4 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
LCHNA4D1U4 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC30.06■■■□□ 2.4
LCHNA4D1U4 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
LCHNA4D1U4 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
LCHNA4D1U4 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
LCHNA4D1U4 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC30.04■■■□□ 2.4
LCHNA4D1U4 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.02■■■□□ 2.4
LCHNA4D1U4 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC30.02■■■□□ 2.4
LCHNA4D1U4 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC30■■■□□ 2.39
LCHNA4D1U4 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30■■■□□ 2.39
LCHNA4D1U4 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC29.98■■■□□ 2.39
LCHNA4D1U4 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC29.97■■■□□ 2.39
LCHNA4D1U4 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
LCHNA4D1U4 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC29.96■■■□□ 2.39
LCHNA4D1U4 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC29.95■■■□□ 2.39
LCHNA4D1U4 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC29.93■■■□□ 2.38
LCHNA4D1U4 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC29.93■■■□□ 2.38
LCHNA4D1U4 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
LCHNA4D1U4 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC29.92■■■□□ 2.38
LCHNA4D1U4 ZNRF2P2-203ENST00000454624 420 ntBASIC29.92■■■□□ 2.38
LCHNA4D1U4 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC29.91■■■□□ 2.38
LCHNA4D1U4 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC29.9■■■□□ 2.38
LCHNA4D1U4 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
LCHNA4D1U4 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
LCHNA4D1U4 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC29.87■■■□□ 2.37
LCHNA4D1U4 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC29.87■■■□□ 2.37
LCHNA4D1U4 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
LCHNA4D1U4 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
LCHNA4D1U4 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
LCHNA4D1U4 BOD1-206ENST00000480951 814 ntTSL 2 BASIC29.86■■■□□ 2.37
LCHNA4D1U4 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC29.85■■■□□ 2.37
LCHNA4D1U4 DENR-202ENST00000455982 1052 ntTSL 5 BASIC29.85■■■□□ 2.37
LCHNA4D1U4 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
LCHNA4D1U4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC29.84■■■□□ 2.37
LCHNA4D1U4 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
LCHNA4D1U4 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
LCHNA4D1U4 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC29.82■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms