Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TRBV7-1A0A0A6YYK4 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.05
TRBV7-1A0A0A6YYK4 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC21.58■■□□□ 1.04
TRBV7-1A0A0A6YYK4 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
TRBV7-1A0A0A6YYK4 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
TRBV7-1A0A0A6YYK4 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
TRBV7-1A0A0A6YYK4 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC21.55■■□□□ 1.04
TRBV7-1A0A0A6YYK4 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRBV7-1A0A0A6YYK4 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRBV7-1A0A0A6YYK4 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRBV7-1A0A0A6YYK4 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC21.53■■□□□ 1.04
TRBV7-1A0A0A6YYK4 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC21.53■■□□□ 1.04
TRBV7-1A0A0A6YYK4 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC21.52■■□□□ 1.04
TRBV7-1A0A0A6YYK4 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRBV7-1A0A0A6YYK4 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRBV7-1A0A0A6YYK4 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRBV7-1A0A0A6YYK4 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC21.5■■□□□ 1.03
TRBV7-1A0A0A6YYK4 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
TRBV7-1A0A0A6YYK4 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC21.48■■□□□ 1.03
TRBV7-1A0A0A6YYK4 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRBV7-1A0A0A6YYK4 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRBV7-1A0A0A6YYK4 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
TRBV7-1A0A0A6YYK4 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRBV7-1A0A0A6YYK4 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC21.43■■□□□ 1.02
TRBV7-1A0A0A6YYK4 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC21.43■■□□□ 1.02
TRBV7-1A0A0A6YYK4 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRBV7-1A0A0A6YYK4 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRBV7-1A0A0A6YYK4 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC21.43■■□□□ 1.02
TRBV7-1A0A0A6YYK4 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRBV7-1A0A0A6YYK4 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRBV7-1A0A0A6YYK4 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRBV7-1A0A0A6YYK4 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRBV7-1A0A0A6YYK4 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC21.41■■□□□ 1.02
TRBV7-1A0A0A6YYK4 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
TRBV7-1A0A0A6YYK4 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC21.4■■□□□ 1.02
TRBV7-1A0A0A6YYK4 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TRBV7-1A0A0A6YYK4 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC21.4■■□□□ 1.02
TRBV7-1A0A0A6YYK4 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRBV7-1A0A0A6YYK4 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRBV7-1A0A0A6YYK4 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRBV7-1A0A0A6YYK4 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
TRBV7-1A0A0A6YYK4 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRBV7-1A0A0A6YYK4 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC21.36■■□□□ 1.01
TRBV7-1A0A0A6YYK4 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRBV7-1A0A0A6YYK4 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC21.35■■□□□ 1.01
TRBV7-1A0A0A6YYK4 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRBV7-1A0A0A6YYK4 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRBV7-1A0A0A6YYK4 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC21.34■■□□□ 1.01
TRBV7-1A0A0A6YYK4 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRBV7-1A0A0A6YYK4 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
TRBV7-1A0A0A6YYK4 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC21.33■■□□□ 1.01
TRBV7-1A0A0A6YYK4 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC21.33■■□□□ 1.01
TRBV7-1A0A0A6YYK4 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC21.33■■□□□ 1
TRBV7-1A0A0A6YYK4 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
TRBV7-1A0A0A6YYK4 AC120057.4-201ENST00000624722 1615 ntBASIC21.33■■□□□ 1
TRBV7-1A0A0A6YYK4 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRBV7-1A0A0A6YYK4 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC21.31■■□□□ 1
TRBV7-1A0A0A6YYK4 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRBV7-1A0A0A6YYK4 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRBV7-1A0A0A6YYK4 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRBV7-1A0A0A6YYK4 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRBV7-1A0A0A6YYK4 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRBV7-1A0A0A6YYK4 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRBV7-1A0A0A6YYK4 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
TRBV7-1A0A0A6YYK4 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRBV7-1A0A0A6YYK4 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC21.28■■□□□ 1
TRBV7-1A0A0A6YYK4 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRBV7-1A0A0A6YYK4 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRBV7-1A0A0A6YYK4 KLF16-203ENST00000592313 508 ntTSL 3 BASIC21.26■□□□□ 0.99
TRBV7-1A0A0A6YYK4 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRBV7-1A0A0A6YYK4 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRBV7-1A0A0A6YYK4 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
TRBV7-1A0A0A6YYK4 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
TRBV7-1A0A0A6YYK4 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRBV7-1A0A0A6YYK4 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC21.19■□□□□ 0.98
TRBV7-1A0A0A6YYK4 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRBV7-1A0A0A6YYK4 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRBV7-1A0A0A6YYK4 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRBV7-1A0A0A6YYK4 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC21.18■□□□□ 0.98
TRBV7-1A0A0A6YYK4 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
TRBV7-1A0A0A6YYK4 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRBV7-1A0A0A6YYK4 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC21.17■□□□□ 0.98
TRBV7-1A0A0A6YYK4 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRBV7-1A0A0A6YYK4 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
TRBV7-1A0A0A6YYK4 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRBV7-1A0A0A6YYK4 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC21.14■□□□□ 0.97
TRBV7-1A0A0A6YYK4 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.13■□□□□ 0.97
TRBV7-1A0A0A6YYK4 ST7-205ENST00000393446 2114 ntTSL 5 BASIC21.13■□□□□ 0.97
TRBV7-1A0A0A6YYK4 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRBV7-1A0A0A6YYK4 RARRES2P7-201ENST00000567349 469 ntBASIC21.11■□□□□ 0.97
TRBV7-1A0A0A6YYK4 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRBV7-1A0A0A6YYK4 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRBV7-1A0A0A6YYK4 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
TRBV7-1A0A0A6YYK4 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRBV7-1A0A0A6YYK4 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC21.09■□□□□ 0.97
TRBV7-1A0A0A6YYK4 ST7-202ENST00000323984 2142 ntTSL 5 BASIC21.08■□□□□ 0.97
TRBV7-1A0A0A6YYK4 ST7-207ENST00000393449 2127 ntTSL 5 BASIC21.08■□□□□ 0.97
TRBV7-1A0A0A6YYK4 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRBV7-1A0A0A6YYK4 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRBV7-1A0A0A6YYK4 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms