Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RETREG2Q8NC44 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RETREG2Q8NC44 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
RETREG2Q8NC44 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RETREG2Q8NC44 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
RETREG2Q8NC44 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
RETREG2Q8NC44 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
RETREG2Q8NC44 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
RETREG2Q8NC44 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC26.17■■□□□ 1.78
RETREG2Q8NC44 LSM4-201ENST00000252816 986 ntTSL 2 BASIC26.17■■□□□ 1.78
RETREG2Q8NC44 TK2-202ENST00000417693 1046 ntTSL 2 BASIC26.17■■□□□ 1.78
RETREG2Q8NC44 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC26.17■■□□□ 1.78
RETREG2Q8NC44 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC26.17■■□□□ 1.78
RETREG2Q8NC44 EXOG-217ENST00000630638 197 ntTSL 5 BASIC26.17■■□□□ 1.78
RETREG2Q8NC44 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
RETREG2Q8NC44 AC138932.3-201ENST00000567634 1902 ntBASIC26.17■■□□□ 1.78
RETREG2Q8NC44 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC26.16■■□□□ 1.78
RETREG2Q8NC44 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
RETREG2Q8NC44 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
RETREG2Q8NC44 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
RETREG2Q8NC44 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
RETREG2Q8NC44 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
RETREG2Q8NC44 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC26.16■■□□□ 1.78
RETREG2Q8NC44 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC26.16■■□□□ 1.78
RETREG2Q8NC44 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
RETREG2Q8NC44 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC26.16■■□□□ 1.78
RETREG2Q8NC44 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC26.16■■□□□ 1.78
RETREG2Q8NC44 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC26.16■■□□□ 1.78
RETREG2Q8NC44 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC26.16■■□□□ 1.78
RETREG2Q8NC44 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
RETREG2Q8NC44 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC26.16■■□□□ 1.78
RETREG2Q8NC44 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RETREG2Q8NC44 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC26.15■■□□□ 1.78
RETREG2Q8NC44 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
RETREG2Q8NC44 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RETREG2Q8NC44 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
RETREG2Q8NC44 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
RETREG2Q8NC44 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
RETREG2Q8NC44 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
RETREG2Q8NC44 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
RETREG2Q8NC44 SENP5-202ENST00000419026 973 ntTSL 3 BASIC26.14■■□□□ 1.78
RETREG2Q8NC44 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC26.14■■□□□ 1.78
RETREG2Q8NC44 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
RETREG2Q8NC44 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
RETREG2Q8NC44 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
RETREG2Q8NC44 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RETREG2Q8NC44 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RETREG2Q8NC44 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RETREG2Q8NC44 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
RETREG2Q8NC44 AC096631.2-201ENST00000436136 790 ntBASIC26.13■■□□□ 1.77
RETREG2Q8NC44 AC110285.6-201ENST00000617652 491 ntBASIC26.13■■□□□ 1.77
RETREG2Q8NC44 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RETREG2Q8NC44 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RETREG2Q8NC44 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RETREG2Q8NC44 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
RETREG2Q8NC44 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.13■■□□□ 1.77
RETREG2Q8NC44 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC26.13■■□□□ 1.77
RETREG2Q8NC44 AK3-203ENST00000447596 705 ntTSL 2 BASIC26.12■■□□□ 1.77
RETREG2Q8NC44 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
RETREG2Q8NC44 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC26.12■■□□□ 1.77
RETREG2Q8NC44 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC26.12■■□□□ 1.77
RETREG2Q8NC44 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
RETREG2Q8NC44 AC005837.3-201ENST00000612163 286 ntBASIC26.12■■□□□ 1.77
RETREG2Q8NC44 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC26.12■■□□□ 1.77
RETREG2Q8NC44 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC26.11■■□□□ 1.77
RETREG2Q8NC44 AL139125.2-201ENST00000623134 1869 ntBASIC26.11■■□□□ 1.77
RETREG2Q8NC44 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC26.11■■□□□ 1.77
RETREG2Q8NC44 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
RETREG2Q8NC44 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
RETREG2Q8NC44 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC26.11■■□□□ 1.77
RETREG2Q8NC44 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC26.11■■□□□ 1.77
RETREG2Q8NC44 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
RETREG2Q8NC44 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
RETREG2Q8NC44 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC26.1■■□□□ 1.77
RETREG2Q8NC44 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC26.1■■□□□ 1.77
RETREG2Q8NC44 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
RETREG2Q8NC44 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RETREG2Q8NC44 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC26.09■■□□□ 1.77
RETREG2Q8NC44 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC26.09■■□□□ 1.77
RETREG2Q8NC44 CLTA-210ENST00000540080 989 ntTSL 2 BASIC26.09■■□□□ 1.77
RETREG2Q8NC44 MIR4466-201ENST00000606121 54 ntBASIC26.09■■□□□ 1.77
RETREG2Q8NC44 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RETREG2Q8NC44 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
RETREG2Q8NC44 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RETREG2Q8NC44 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC26.09■■□□□ 1.77
RETREG2Q8NC44 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RETREG2Q8NC44 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
RETREG2Q8NC44 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC26.08■■□□□ 1.77
RETREG2Q8NC44 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
RETREG2Q8NC44 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC26.07■■□□□ 1.76
RETREG2Q8NC44 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RETREG2Q8NC44 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC26.07■■□□□ 1.76
RETREG2Q8NC44 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RETREG2Q8NC44 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RETREG2Q8NC44 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
RETREG2Q8NC44 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
RETREG2Q8NC44 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RETREG2Q8NC44 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC26.06■■□□□ 1.76
RETREG2Q8NC44 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC26.06■■□□□ 1.76
RETREG2Q8NC44 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms