RNA–Protein interactions for RNA: ENST00000346144.8

MADCAM1-202, Transcript of mucosal vascular addressin cell adhesion molecule 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MADCAM1, Length 1,309 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MADCAM1-202ENST00000346144 NISCHQ9Y2I1 1504 aa56.27■■■■■ 6.6
MADCAM1-202ENST00000346144 CCDC180Q9P1Z9 1646 aa49.9■■■■■ 5.58
MADCAM1-202ENST00000346144 ABCC9O60706 1549 aa48.27■■■■■ 5.32
MADCAM1-202ENST00000346144 ZCCHC6Q5VYS8 1495 aaKnown RBP46.98■■■■■ 5.11
MADCAM1-202ENST00000346144 NACADO15069 1562 aa46.75■■■■■ 5.08
MADCAM1-202ENST00000346144 DCAF8L2P0C7V8 631 aa46.71■■■■■ 5.07
MADCAM1-202ENST00000346144 RB1CC1Q8TDY2 1594 aa46.7■■■■■ 5.07
MADCAM1-202ENST00000346144 MYO15BQ96JP2 1530 aa46.65■■■■■ 5.06
MADCAM1-202ENST00000346144 DCAF1Q9Y4B6 1507 aa46.61■■■■■ 5.05
MADCAM1-202ENST00000346144 UNC13AQ9UPW8 1703 aa45.71■■■■■ 4.91
MADCAM1-202ENST00000346144 SCRIBQ14160 1630 aa45.5■■■■■ 4.88
MADCAM1-202ENST00000346144 BICRAQ9NZM4 1560 aa45.27■■■■■ 4.84
MADCAM1-202ENST00000346144 PABPN1Q86U42 306 aaKnown RBP eCLIP45.14■■■■■ 4.82
MADCAM1-202ENST00000346144 SHROOM4Q9ULL8 1493 aa44.86■■■■■ 4.77
MADCAM1-202ENST00000346144 DNAJC5BQ9UF47 199 aa44.47■■■■■ 4.71
MADCAM1-202ENST00000346144 EIF4G1Q04637 1599 aaKnown RBP44.03■■■■■ 4.64
MADCAM1-202ENST00000346144 CECR2Q9BXF3 1484 aa43.75■■■■■ 4.59
MADCAM1-202ENST00000346144 CC2D2AQ9P2K1 1620 aa43.74■■■■■ 4.59
MADCAM1-202ENST00000346144 BAZ1AQ9NRL2 1556 aaPredicted RBP43.59■■■■■ 4.57
MADCAM1-202ENST00000346144 SMARCA4P51532 1647 aa43.59■■■■■ 4.57
MADCAM1-202ENST00000346144 MROH2BQ7Z745 1585 aa43.37■■■■■ 4.53
MADCAM1-202ENST00000346144 SMARCA2P51531 1590 aa43.2■■■■■ 4.51
MADCAM1-202ENST00000346144 ATAD2BQ9ULI0 1458 aa43.19■■■■■ 4.51
MADCAM1-202ENST00000346144 PEG3Q9GZU2 1588 aa43.17■■■■■ 4.5
MADCAM1-202ENST00000346144 NCAPD3P42695 1498 aa43.1■■■■■ 4.49
MADCAM1-202ENST00000346144 RSF1Q96T23 1441 aaPredicted RBP43.01■■■■■ 4.48
MADCAM1-202ENST00000346144 HMGXB3Q12766 1538 aa42.98■■■■■ 4.47
MADCAM1-202ENST00000346144 WIZO95785 1651 aa42.94■■■■■ 4.47
MADCAM1-202ENST00000346144 BAZ1BQ9UIG0 1483 aaKnown RBP42.87■■■■■ 4.45
MADCAM1-202ENST00000346144 TOP2AP11388 1531 aaKnown RBP42.52■■■■■ 4.4
MADCAM1-202ENST00000346144 SUPT5HO00267 1087 aaKnown RBP42.2■■■■■ 4.35
MADCAM1-202ENST00000346144 CCDC88BA6NC98 1476 aa41.98■■■■■ 4.31
MADCAM1-202ENST00000346144 LAMC3Q9Y6N6 1575 aa41.94■■■■■ 4.3
MADCAM1-202ENST00000346144 NESP48681 1621 aa41.92■■■■■ 4.3
MADCAM1-202ENST00000346144 CADPSQ9ULU8 1353 aa41.86■■■■■ 4.29
MADCAM1-202ENST00000346144 CFTRP13569 1480 aa41.73■■■■■ 4.27
MADCAM1-202ENST00000346144 PDS5BQ9NTI5 1447 aa41.59■■■■■ 4.25
MADCAM1-202ENST00000346144 ERCC6Q03468 1493 aa41.58■■■■■ 4.25
MADCAM1-202ENST00000346144 PRDM2Q13029 1718 aa41.56■■■■■ 4.24
MADCAM1-202ENST00000346144 KIF21AQ7Z4S6 1674 aa41.51■■■■■ 4.24
MADCAM1-202ENST00000346144 FANCD2Q9BXW9 1451 aa41.39■■■■■ 4.22
MADCAM1-202ENST00000346144 CEP164Q9UPV0 1460 aa41.31■■■■■ 4.2
MADCAM1-202ENST00000346144 THOC2Q8NI27 1593 aaKnown RBP41.25■■■■■ 4.19
MADCAM1-202ENST00000346144 MRC2Q9UBG0 1479 aa41.15■■■■■ 4.18
MADCAM1-202ENST00000346144 CUX2O14529 1486 aa41.12■■■■■ 4.17
MADCAM1-202ENST00000346144 WDR62O43379 1518 aa41.03■■■■■ 4.16
MADCAM1-202ENST00000346144 URB2Q14146 1524 aaKnown RBP40.96■■■■■ 4.15
MADCAM1-202ENST00000346144 ABCC8Q09428 1581 aa40.83■■■■■ 4.13
MADCAM1-202ENST00000346144 DNMBPQ6XZF7 1577 aa40.81■■■■■ 4.12
MADCAM1-202ENST00000346144 TOPBP1Q92547 1522 aa40.8■■■■■ 4.12
MADCAM1-202ENST00000346144 CUX1P39880 1505 aa40.66■■■■■ 4.1
MADCAM1-202ENST00000346144 DNAJC5Q9H3Z4 198 aa40.58■■■■■ 4.09
MADCAM1-202ENST00000346144 WRNQ14191 1432 aaPredicted RBP eCLIP40.54■■■■■ 4.08
MADCAM1-202ENST00000346144 BIVM-ERCC5R4GMW8 1640 aa40.48■■■■■ 4.07
MADCAM1-202ENST00000346144 POLA1P09884 1462 aaPredicted RBP40.47■■■■■ 4.07
MADCAM1-202ENST00000346144 TOP2BQ02880 1626 aa40.46■■■■■ 4.07
MADCAM1-202ENST00000346144 SYNJ1O43426 1573 aa40.46■■■■■ 4.07
MADCAM1-202ENST00000346144 FGD5Q6ZNL6 1462 aa40.44■■■■■ 4.06
MADCAM1-202ENST00000346144 IFT140Q96RY7 1462 aa40.42■■■■■ 4.06
MADCAM1-202ENST00000346144 TARBP1Q13395 1621 aaKnown RBP40.35■■■■■ 4.05
MADCAM1-202ENST00000346144 SOGA1O94964 1423 aa40.29■■■■■ 4.04
MADCAM1-202ENST00000346144 RAD54L2Q9Y4B4 1467 aa40.27■■■■■ 4.04
MADCAM1-202ENST00000346144 ZNF608Q9ULD9 1512 aaPredicted RBP40.18■■■■■ 4.02
MADCAM1-202ENST00000346144 WDR97A6NE52 1622 aa40.17■■■■■ 4.02
MADCAM1-202ENST00000346144 EIF4G3O43432 1585 aaKnown RBP40.1■■■■■ 4.01
MADCAM1-202ENST00000346144 ABCA10Q8WWZ4 1543 aa40.09■■■■■ 4.01
MADCAM1-202ENST00000346144 AQRO60306 1485 aaKnown RBP eCLIP39.99■■■■□ 3.99
MADCAM1-202ENST00000346144 TDRD9Q8NDG6 1382 aaKnown RBP39.98■■■■□ 3.99
MADCAM1-202ENST00000346144 ABCA5Q8WWZ7 1642 aa39.92■■■■□ 3.98
MADCAM1-202ENST00000346144 TRIM41Q8WV44 630 aa39.86■■■■□ 3.97
MADCAM1-202ENST00000346144 GAPVD1Q14C86 1478 aa39.85■■■■□ 3.97
MADCAM1-202ENST00000346144 PBRM1Q86U86 1689 aa39.82■■■■□ 3.96
MADCAM1-202ENST00000346144 GRIN2BQ13224 1484 aa39.79■■■■□ 3.96
MADCAM1-202ENST00000346144 SNAPC4Q5SXM2 1469 aa39.68■■■■□ 3.94
MADCAM1-202ENST00000346144 CHIC1Q5VXU3 224 aa39.67■■■■□ 3.94
MADCAM1-202ENST00000346144 KIF27Q86VH2 1401 aa39.67■■■■□ 3.94
MADCAM1-202ENST00000346144 MAGI1Q96QZ7 1491 aaPredicted RBP39.65■■■■□ 3.94
MADCAM1-202ENST00000346144 ERICH3Q5RHP9 1530 aa39.63■■■■□ 3.93
MADCAM1-202ENST00000346144 CHD1O14646 1710 aa39.53■■■■□ 3.92
MADCAM1-202ENST00000346144 ADAMTS12P58397 1594 aa39.49■■■■□ 3.91
MADCAM1-202ENST00000346144 SYNJ2O15056 1496 aa39.49■■■■□ 3.91
MADCAM1-202ENST00000346144 RUSC2Q8N2Y8 1516 aa39.43■■■■□ 3.9
MADCAM1-202ENST00000346144 IGF1RP08069 1367 aa39.42■■■■□ 3.9
MADCAM1-202ENST00000346144 FHAD1B1AJZ9 1412 aa39.41■■■■□ 3.9
MADCAM1-202ENST00000346144 CUL7Q14999 1698 aa39.39■■■■□ 3.9
MADCAM1-202ENST00000346144 FBLN2P98095 1184 aa39.39■■■■□ 3.9
MADCAM1-202ENST00000346144 CHMP7Q8WUX9 453 aaPredicted RBP39.38■■■■□ 3.89
MADCAM1-202ENST00000346144 OSCARQ8IYS5 282 aa39.33■■■■□ 3.89
MADCAM1-202ENST00000346144 GRIN2AQ12879 1464 aa39.29■■■■□ 3.88
MADCAM1-202ENST00000346144 EEA1Q15075 1411 aa39.23■■■■□ 3.87
MADCAM1-202ENST00000346144 CARMIL1Q5VZK9 1371 aa39.21■■■■□ 3.87
MADCAM1-202ENST00000346144 CEP170Q5SW79 1584 aa39.09■■■■□ 3.85
MADCAM1-202ENST00000346144 NUP160Q12769 1436 aa39.09■■■■□ 3.85
MADCAM1-202ENST00000346144 CLASP1Q7Z460 1538 aa39.08■■■■□ 3.85
MADCAM1-202ENST00000346144 CSRNP3Q8WYN3 585 aa39.06■■■■□ 3.84
MADCAM1-202ENST00000346144 RAPGEF2Q9Y4G8 1499 aa39.05■■■■□ 3.84
MADCAM1-202ENST00000346144 PRXQ9BXM0 1461 aa39.03■■■■□ 3.84
MADCAM1-202ENST00000346144 FAM9AQ8IZU1 332 aaPredicted RBP38.98■■■■□ 3.83
MADCAM1-202ENST00000346144 KIAA0586Q9BVV6 1533 aa38.83■■■■□ 3.81
MADCAM1-202ENST00000346144 KIF21BO75037 1637 aa38.82■■■■□ 3.81
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms