Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC26.58■■□□□ 1.85
HRH3Q9Y5N1 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC26.58■■□□□ 1.85
HRH3Q9Y5N1 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
HRH3Q9Y5N1 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC26.56■■□□□ 1.84
HRH3Q9Y5N1 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
HRH3Q9Y5N1 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC26.53■■□□□ 1.84
HRH3Q9Y5N1 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
HRH3Q9Y5N1 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC26.49■■□□□ 1.83
HRH3Q9Y5N1 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
HRH3Q9Y5N1 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
HRH3Q9Y5N1 DYNLL1-208ENST00000550178 581 ntBASIC26.43■■□□□ 1.82
HRH3Q9Y5N1 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
HRH3Q9Y5N1 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC26.42■■□□□ 1.82
HRH3Q9Y5N1 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
HRH3Q9Y5N1 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
HRH3Q9Y5N1 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC26.41■■□□□ 1.82
HRH3Q9Y5N1 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC26.39■■□□□ 1.82
HRH3Q9Y5N1 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC26.37■■□□□ 1.81
HRH3Q9Y5N1 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC26.36■■□□□ 1.81
HRH3Q9Y5N1 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
HRH3Q9Y5N1 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
HRH3Q9Y5N1 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
HRH3Q9Y5N1 AC145285.7-201ENST00000614819 1539 ntBASIC26.34■■□□□ 1.81
HRH3Q9Y5N1 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
HRH3Q9Y5N1 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
HRH3Q9Y5N1 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
HRH3Q9Y5N1 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC26.31■■□□□ 1.8
HRH3Q9Y5N1 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
HRH3Q9Y5N1 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
HRH3Q9Y5N1 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC26.28■■□□□ 1.8
HRH3Q9Y5N1 AL031258.1-201ENST00000623562 325 ntBASIC26.25■■□□□ 1.79
HRH3Q9Y5N1 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
HRH3Q9Y5N1 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
HRH3Q9Y5N1 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC26.23■■□□□ 1.79
HRH3Q9Y5N1 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC26.21■■□□□ 1.79
HRH3Q9Y5N1 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
HRH3Q9Y5N1 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
HRH3Q9Y5N1 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC26.16■■□□□ 1.78
HRH3Q9Y5N1 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
HRH3Q9Y5N1 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
HRH3Q9Y5N1 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC26.12■■□□□ 1.77
HRH3Q9Y5N1 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC26.11■■□□□ 1.77
HRH3Q9Y5N1 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
HRH3Q9Y5N1 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
HRH3Q9Y5N1 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
HRH3Q9Y5N1 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
HRH3Q9Y5N1 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
HRH3Q9Y5N1 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
HRH3Q9Y5N1 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
HRH3Q9Y5N1 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
HRH3Q9Y5N1 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC26.01■■□□□ 1.75
HRH3Q9Y5N1 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC26.01■■□□□ 1.75
HRH3Q9Y5N1 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC26.01■■□□□ 1.75
HRH3Q9Y5N1 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC26■■□□□ 1.75
HRH3Q9Y5N1 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
HRH3Q9Y5N1 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
HRH3Q9Y5N1 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
HRH3Q9Y5N1 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
HRH3Q9Y5N1 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
HRH3Q9Y5N1 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
HRH3Q9Y5N1 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC25.92■■□□□ 1.74
HRH3Q9Y5N1 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
HRH3Q9Y5N1 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
HRH3Q9Y5N1 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC25.86■■□□□ 1.73
HRH3Q9Y5N1 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC25.85■■□□□ 1.73
HRH3Q9Y5N1 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC25.85■■□□□ 1.73
HRH3Q9Y5N1 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
HRH3Q9Y5N1 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC25.84■■□□□ 1.73
HRH3Q9Y5N1 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
HRH3Q9Y5N1 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC25.82■■□□□ 1.72
HRH3Q9Y5N1 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
HRH3Q9Y5N1 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC25.82■■□□□ 1.72
HRH3Q9Y5N1 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
HRH3Q9Y5N1 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC25.8■■□□□ 1.72
HRH3Q9Y5N1 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
HRH3Q9Y5N1 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
HRH3Q9Y5N1 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
HRH3Q9Y5N1 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC25.76■■□□□ 1.71
HRH3Q9Y5N1 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
HRH3Q9Y5N1 EBPL-203ENST00000378270 579 ntTSL 2 BASIC25.74■■□□□ 1.71
HRH3Q9Y5N1 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC25.74■■□□□ 1.71
HRH3Q9Y5N1 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
HRH3Q9Y5N1 RARRES2P7-201ENST00000567349 469 ntBASIC25.72■■□□□ 1.71
HRH3Q9Y5N1 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC25.72■■□□□ 1.71
HRH3Q9Y5N1 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
HRH3Q9Y5N1 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
HRH3Q9Y5N1 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC25.71■■□□□ 1.71
HRH3Q9Y5N1 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC25.71■■□□□ 1.71
HRH3Q9Y5N1 MVK-208ENST00000539696 608 ntTSL 5 BASIC25.69■■□□□ 1.7
HRH3Q9Y5N1 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC25.68■■□□□ 1.7
HRH3Q9Y5N1 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC25.66■■□□□ 1.7
HRH3Q9Y5N1 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
HRH3Q9Y5N1 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
HRH3Q9Y5N1 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
HRH3Q9Y5N1 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
HRH3Q9Y5N1 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.69
HRH3Q9Y5N1 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
HRH3Q9Y5N1 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC25.63■■□□□ 1.69
HRH3Q9Y5N1 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
HRH3Q9Y5N1 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms