Protein–RNA interactions for Protein: Q9Y5H6

PCDHA8, Protocadherin alpha-8, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA8Q9Y5H6 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC33.26■■■□□ 2.92
PCDHA8Q9Y5H6 AP002365.1-201ENST00000603448 772 ntBASIC33.26■■■□□ 2.91
PCDHA8Q9Y5H6 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
PCDHA8Q9Y5H6 AC145285.7-201ENST00000614819 1539 ntBASIC33.23■■■□□ 2.91
PCDHA8Q9Y5H6 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC33.19■■■□□ 2.9
PCDHA8Q9Y5H6 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
PCDHA8Q9Y5H6 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
PCDHA8Q9Y5H6 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC33.16■■■□□ 2.9
PCDHA8Q9Y5H6 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC33.14■■■□□ 2.9
PCDHA8Q9Y5H6 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC33.13■■■□□ 2.89
PCDHA8Q9Y5H6 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC33.12■■■□□ 2.89
PCDHA8Q9Y5H6 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC33.1■■■□□ 2.89
PCDHA8Q9Y5H6 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC33.05■■■□□ 2.88
PCDHA8Q9Y5H6 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC33.04■■■□□ 2.88
PCDHA8Q9Y5H6 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
PCDHA8Q9Y5H6 DYNLL1-208ENST00000550178 581 ntBASIC33.03■■■□□ 2.88
PCDHA8Q9Y5H6 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
PCDHA8Q9Y5H6 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC32.98■■■□□ 2.87
PCDHA8Q9Y5H6 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
PCDHA8Q9Y5H6 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC32.96■■■□□ 2.87
PCDHA8Q9Y5H6 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC32.95■■■□□ 2.87
PCDHA8Q9Y5H6 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
PCDHA8Q9Y5H6 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
PCDHA8Q9Y5H6 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC32.94■■■□□ 2.86
PCDHA8Q9Y5H6 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC32.92■■■□□ 2.86
PCDHA8Q9Y5H6 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
PCDHA8Q9Y5H6 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC32.86■■■□□ 2.85
PCDHA8Q9Y5H6 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC32.86■■■□□ 2.85
PCDHA8Q9Y5H6 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
PCDHA8Q9Y5H6 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
PCDHA8Q9Y5H6 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC32.85■■■□□ 2.85
PCDHA8Q9Y5H6 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC32.84■■■□□ 2.85
PCDHA8Q9Y5H6 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC32.83■■■□□ 2.85
PCDHA8Q9Y5H6 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
PCDHA8Q9Y5H6 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC32.81■■■□□ 2.84
PCDHA8Q9Y5H6 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC32.81■■■□□ 2.84
PCDHA8Q9Y5H6 AL031258.1-201ENST00000623562 325 ntBASIC32.81■■■□□ 2.84
PCDHA8Q9Y5H6 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC32.8■■■□□ 2.84
PCDHA8Q9Y5H6 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC32.8■■■□□ 2.84
PCDHA8Q9Y5H6 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
PCDHA8Q9Y5H6 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC32.79■■■□□ 2.84
PCDHA8Q9Y5H6 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC32.77■■■□□ 2.84
PCDHA8Q9Y5H6 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC32.76■■■□□ 2.84
PCDHA8Q9Y5H6 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC32.73■■■□□ 2.83
PCDHA8Q9Y5H6 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
PCDHA8Q9Y5H6 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
PCDHA8Q9Y5H6 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
PCDHA8Q9Y5H6 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC32.64■■■□□ 2.82
PCDHA8Q9Y5H6 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
PCDHA8Q9Y5H6 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC32.61■■■□□ 2.81
PCDHA8Q9Y5H6 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC32.61■■■□□ 2.81
PCDHA8Q9Y5H6 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
PCDHA8Q9Y5H6 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC32.54■■■□□ 2.8
PCDHA8Q9Y5H6 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
PCDHA8Q9Y5H6 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
PCDHA8Q9Y5H6 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
PCDHA8Q9Y5H6 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
PCDHA8Q9Y5H6 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC32.46■■■□□ 2.79
PCDHA8Q9Y5H6 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC32.46■■■□□ 2.79
PCDHA8Q9Y5H6 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC32.46■■■□□ 2.79
PCDHA8Q9Y5H6 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC32.45■■■□□ 2.79
PCDHA8Q9Y5H6 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC32.45■■■□□ 2.79
PCDHA8Q9Y5H6 EBPL-203ENST00000378270 579 ntTSL 2 BASIC32.44■■■□□ 2.78
PCDHA8Q9Y5H6 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
PCDHA8Q9Y5H6 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC32.43■■■□□ 2.78
PCDHA8Q9Y5H6 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
PCDHA8Q9Y5H6 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
PCDHA8Q9Y5H6 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC32.37■■■□□ 2.77
PCDHA8Q9Y5H6 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
PCDHA8Q9Y5H6 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
PCDHA8Q9Y5H6 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC32.35■■■□□ 2.77
PCDHA8Q9Y5H6 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
PCDHA8Q9Y5H6 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC32.34■■■□□ 2.77
PCDHA8Q9Y5H6 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
PCDHA8Q9Y5H6 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
PCDHA8Q9Y5H6 MVK-208ENST00000539696 608 ntTSL 5 BASIC32.33■■■□□ 2.77
PCDHA8Q9Y5H6 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC32.32■■■□□ 2.76
PCDHA8Q9Y5H6 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
PCDHA8Q9Y5H6 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
PCDHA8Q9Y5H6 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC32.28■■■□□ 2.76
PCDHA8Q9Y5H6 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC32.27■■■□□ 2.76
PCDHA8Q9Y5H6 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
PCDHA8Q9Y5H6 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
PCDHA8Q9Y5H6 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC32.24■■■□□ 2.75
PCDHA8Q9Y5H6 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC32.22■■■□□ 2.75
PCDHA8Q9Y5H6 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
PCDHA8Q9Y5H6 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
PCDHA8Q9Y5H6 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC32.17■■■□□ 2.74
PCDHA8Q9Y5H6 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC32.16■■■□□ 2.74
PCDHA8Q9Y5H6 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
PCDHA8Q9Y5H6 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
PCDHA8Q9Y5H6 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
PCDHA8Q9Y5H6 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
PCDHA8Q9Y5H6 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC32.09■■■□□ 2.73
PCDHA8Q9Y5H6 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC32.09■■■□□ 2.73
PCDHA8Q9Y5H6 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC32.09■■■□□ 2.73
PCDHA8Q9Y5H6 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC32.08■■■□□ 2.73
PCDHA8Q9Y5H6 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
PCDHA8Q9Y5H6 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC32.05■■■□□ 2.72
PCDHA8Q9Y5H6 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC32.05■■■□□ 2.72
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms