Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
PCDHB13Q9Y5F0 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC31.74■■■□□ 2.67
PCDHB13Q9Y5F0 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC31.73■■■□□ 2.67
PCDHB13Q9Y5F0 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
PCDHB13Q9Y5F0 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.72■■■□□ 2.67
PCDHB13Q9Y5F0 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
PCDHB13Q9Y5F0 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC31.66■■■□□ 2.66
PCDHB13Q9Y5F0 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC31.64■■■□□ 2.66
PCDHB13Q9Y5F0 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC31.62■■■□□ 2.65
PCDHB13Q9Y5F0 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
PCDHB13Q9Y5F0 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
PCDHB13Q9Y5F0 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
PCDHB13Q9Y5F0 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC31.56■■■□□ 2.64
PCDHB13Q9Y5F0 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC31.56■■■□□ 2.64
PCDHB13Q9Y5F0 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
PCDHB13Q9Y5F0 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC31.53■■■□□ 2.64
PCDHB13Q9Y5F0 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC31.53■■■□□ 2.64
PCDHB13Q9Y5F0 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
PCDHB13Q9Y5F0 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
PCDHB13Q9Y5F0 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
PCDHB13Q9Y5F0 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC31.48■■■□□ 2.63
PCDHB13Q9Y5F0 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
PCDHB13Q9Y5F0 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC31.42■■■□□ 2.62
PCDHB13Q9Y5F0 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PCDHB13Q9Y5F0 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC31.41■■■□□ 2.62
PCDHB13Q9Y5F0 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
PCDHB13Q9Y5F0 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC31.4■■■□□ 2.62
PCDHB13Q9Y5F0 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
PCDHB13Q9Y5F0 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC31.37■■■□□ 2.61
PCDHB13Q9Y5F0 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PCDHB13Q9Y5F0 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC31.37■■■□□ 2.61
PCDHB13Q9Y5F0 AP002365.1-201ENST00000603448 772 ntBASIC31.34■■■□□ 2.61
PCDHB13Q9Y5F0 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
PCDHB13Q9Y5F0 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
PCDHB13Q9Y5F0 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
PCDHB13Q9Y5F0 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
PCDHB13Q9Y5F0 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
PCDHB13Q9Y5F0 DYNLL1-208ENST00000550178 581 ntBASIC31.3■■■□□ 2.6
PCDHB13Q9Y5F0 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
PCDHB13Q9Y5F0 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
PCDHB13Q9Y5F0 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC31.25■■■□□ 2.59
PCDHB13Q9Y5F0 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC31.25■■■□□ 2.59
PCDHB13Q9Y5F0 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC31.25■■■□□ 2.59
PCDHB13Q9Y5F0 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
PCDHB13Q9Y5F0 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
PCDHB13Q9Y5F0 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
PCDHB13Q9Y5F0 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC31.24■■■□□ 2.59
PCDHB13Q9Y5F0 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC31.24■■■□□ 2.59
PCDHB13Q9Y5F0 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
PCDHB13Q9Y5F0 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC31.2■■■□□ 2.59
PCDHB13Q9Y5F0 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC31.19■■■□□ 2.58
PCDHB13Q9Y5F0 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
PCDHB13Q9Y5F0 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
PCDHB13Q9Y5F0 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
PCDHB13Q9Y5F0 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
PCDHB13Q9Y5F0 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
PCDHB13Q9Y5F0 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC31.13■■■□□ 2.57
PCDHB13Q9Y5F0 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC31.13■■■□□ 2.57
PCDHB13Q9Y5F0 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
PCDHB13Q9Y5F0 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
PCDHB13Q9Y5F0 AL031258.1-201ENST00000623562 325 ntBASIC31.1■■■□□ 2.57
PCDHB13Q9Y5F0 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC31.08■■■□□ 2.57
PCDHB13Q9Y5F0 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC31.08■■■□□ 2.57
PCDHB13Q9Y5F0 MVK-208ENST00000539696 608 ntTSL 5 BASIC31.05■■■□□ 2.56
PCDHB13Q9Y5F0 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
PCDHB13Q9Y5F0 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
PCDHB13Q9Y5F0 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
PCDHB13Q9Y5F0 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
PCDHB13Q9Y5F0 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
PCDHB13Q9Y5F0 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC31.02■■■□□ 2.56
PCDHB13Q9Y5F0 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
PCDHB13Q9Y5F0 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC31.02■■■□□ 2.56
PCDHB13Q9Y5F0 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
PCDHB13Q9Y5F0 EBPL-203ENST00000378270 579 ntTSL 2 BASIC30.98■■■□□ 2.55
PCDHB13Q9Y5F0 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC30.98■■■□□ 2.55
PCDHB13Q9Y5F0 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC30.97■■■□□ 2.55
PCDHB13Q9Y5F0 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC30.97■■■□□ 2.55
PCDHB13Q9Y5F0 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC30.95■■■□□ 2.55
PCDHB13Q9Y5F0 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC30.92■■■□□ 2.54
PCDHB13Q9Y5F0 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
PCDHB13Q9Y5F0 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
PCDHB13Q9Y5F0 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
PCDHB13Q9Y5F0 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC30.87■■■□□ 2.53
PCDHB13Q9Y5F0 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
PCDHB13Q9Y5F0 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC30.83■■■□□ 2.53
PCDHB13Q9Y5F0 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
PCDHB13Q9Y5F0 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
PCDHB13Q9Y5F0 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
PCDHB13Q9Y5F0 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC30.78■■■□□ 2.52
PCDHB13Q9Y5F0 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC30.77■■■□□ 2.52
PCDHB13Q9Y5F0 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC30.77■■■□□ 2.52
PCDHB13Q9Y5F0 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC30.76■■■□□ 2.51
PCDHB13Q9Y5F0 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
PCDHB13Q9Y5F0 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC30.71■■■□□ 2.51
PCDHB13Q9Y5F0 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC30.71■■■□□ 2.51
PCDHB13Q9Y5F0 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC30.7■■■□□ 2.51
PCDHB13Q9Y5F0 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC30.68■■■□□ 2.5
PCDHB13Q9Y5F0 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC30.68■■■□□ 2.5
PCDHB13Q9Y5F0 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC30.68■■■□□ 2.5
PCDHB13Q9Y5F0 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms